BLASTX nr result

ID: Ephedra27_contig00028344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028344
         (439 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001054272.1| Os04g0678300 [Oryza sativa Japonica Group] g...    57   2e-06
ref|XP_006827823.1| hypothetical protein AMTR_s00009p00268480 [A...    57   3e-06
gb|EEC78257.1| hypothetical protein OsI_17932 [Oryza sativa Indi...    57   3e-06
emb|CAJ86247.1| H0801D08.5 [Oryza sativa Indica Group] gi|903990...    57   3e-06

>ref|NP_001054272.1| Os04g0678300 [Oryza sativa Japonica Group]
           gi|38344207|emb|CAE54549.1| OSJNBa0064G10.23 [Oryza
           sativa Japonica Group] gi|113565843|dbj|BAF16186.1|
           Os04g0678300 [Oryza sativa Japonica Group]
           gi|222629777|gb|EEE61909.1| hypothetical protein
           OsJ_16633 [Oryza sativa Japonica Group]
          Length = 819

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
 Frame = +2

Query: 152 EMVSDEEDDQFFESLDRIASTSGSDT----EEDFEHQXXXXXXXXXXXXXXXXXXXXYEI 319
           E   +EED++F+ESLDRI S+S S T    ++D +H+                    YE+
Sbjct: 31  EEEEEEEDEEFYESLDRILSSSCSSTSASDDDDQQHRRRRRHHPQPQQLSSSATFSAYEV 90

Query: 320 WKSEPVSVRERRQRLLQQFGIGLNS 394
           W SEP SV ERR+ LL++ G+  +S
Sbjct: 91  WISEPTSVEERRRVLLRRLGLAHDS 115


>ref|XP_006827823.1| hypothetical protein AMTR_s00009p00268480 [Amborella trichopoda]
           gi|548832443|gb|ERM95239.1| hypothetical protein
           AMTR_s00009p00268480 [Amborella trichopoda]
          Length = 930

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
 Frame = +2

Query: 152 EMVSDEEDDQFFESLDRI--ASTSGSDTEEDFEHQXXXXXXXXXXXXXXXXXXXXYEIWK 325
           E   +EE+D+FFESLDRI  +S SGS+TE+D                        YE+W 
Sbjct: 16  EEEEEEEEDRFFESLDRIPSSSASGSETEDD------SLLFTPSANPATTMVMSQYEVWM 69

Query: 326 SEPVSVRERRQRLLQQFGIG-------LNSVAEISASN 418
           +EP  V ERR RLLQ+ G+        L SV   SA++
Sbjct: 70  TEPAPVGERRMRLLQEMGLSHDRALTRLASVVNTSANS 107


>gb|EEC78257.1| hypothetical protein OsI_17932 [Oryza sativa Indica Group]
          Length = 816

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
 Frame = +2

Query: 164 DEEDDQFFESLDRIASTSGSDT----EEDFEHQXXXXXXXXXXXXXXXXXXXXYEIWKSE 331
           +EED++F+ESLDRI S+S S T    ++D +H+                    YE+W SE
Sbjct: 32  EEEDEEFYESLDRILSSSCSSTSASDDDDQQHRRRRRHHPQPQQLSSSATFSAYEVWISE 91

Query: 332 PVSVRERRQRLLQQFGIGLNS 394
           P SV ERR+ LL++ G+  +S
Sbjct: 92  PTSVEERRRVLLRRLGLAHDS 112


>emb|CAJ86247.1| H0801D08.5 [Oryza sativa Indica Group] gi|90399043|emb|CAJ86239.1|
           H0402C08.15 [Oryza sativa Indica Group]
          Length = 785

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
 Frame = +2

Query: 164 DEEDDQFFESLDRIASTSGSDT----EEDFEHQXXXXXXXXXXXXXXXXXXXXYEIWKSE 331
           +EED++F+ESLDRI S+S S T    ++D +H+                    YE+W SE
Sbjct: 32  EEEDEEFYESLDRILSSSCSSTSASDDDDQQHRRRRRHHPQPQQLSSSATFSAYEVWISE 91

Query: 332 PVSVRERRQRLLQQFGIGLNS 394
           P SV ERR+ LL++ G+  +S
Sbjct: 92  PTSVEERRRVLLRRLGLAHDS 112


Top