BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028325
         (1324 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containi...   233   2e-58
ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containi...   232   2e-58
gb|EOY00910.1| Pentatricopeptide repeat-containing protein, puta...   228   4e-57
gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsu...   227   7e-57
gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis]     227   1e-56
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   226   2e-56
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi...   226   2e-56
ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi...   224   6e-56
ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-55
gb|ESW09460.1| hypothetical protein PHAVU_009G129200g [Phaseolus...   222   2e-55
ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [A...   221   4e-55
ref|XP_002889139.1| pentatricopeptide repeat-containing protein ...   221   5e-55
ref|XP_002531063.1| pentatricopeptide repeat-containing protein,...   220   9e-55
gb|EOY16398.1| Tetratricopeptide repeat (TPR)-like superfamily p...   219   2e-54
ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containi...   219   3e-54
gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal...   218   3e-54
ref|NP_177860.2| pentatricopeptide repeat-containing protein [Ar...   218   3e-54
ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containi...   218   4e-54
gb|EMJ25423.1| hypothetical protein PRUPE_ppa017885mg [Prunus pe...   218   4e-54
ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containi...   218   6e-54

>ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Solanum lycopersicum]
          Length = 478

 Score =  233 bits (593), Expect = 2e-58
 Identities = 124/386 (32%), Positives = 201/386 (52%)
 Frame = -3

Query: 1166 HSRQSGFLQTKCKTYTTLNPSRPQEDNLKRMCNILLSARLAEQKPATKSDDDDEETXXXX 987
            H +  G      + Y++   +  + D L R+C I++S                       
Sbjct: 6    HQKVCGRTMNFTRMYSSKETTEVKLDPLTRLCKIMMSC---------------------- 43

Query: 986  XXXXXXXKPNTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEV 807
                    P   +  EL++S I+V P+   ++LKRFE++G+  YRFF+W   Q  YE+  
Sbjct: 44   --------PKVGLDIELDQSGIRVLPEMVEDVLKRFENAGMLAYRFFEWAGKQHNYEHST 95

Query: 806  EAYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQM 627
             AYH +I  L ++R + + W + +EM TK++L  + F I+MR YA+A K E  L  FH M
Sbjct: 96   RAYHSMIGSLAKIRQYQMMWDLVNEMKTKRMLNIETFCIIMRKYARAQKVEETLYTFHIM 155

Query: 626  EKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKE 447
             K       +  FN  L  LCKS   E A ++F+       +F PD+K+Y+ILIE WG+ 
Sbjct: 156  NK-FDVPPNLAAFNGLLSALCKSKNVEKAQEIFD---TKKNEFTPDSKTYSILIEGWGRA 211

Query: 446  QNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAY 267
             N  +   ++ +M+  G  P+++ Y + +  LC+   V+EA + +++M +  C P ++ Y
Sbjct: 212  PNLPKAREVYREMIEVGCNPDIVTYGIMVDILCKAGRVDEAVEIVKEMDFSGCRPTSFIY 271

Query: 266  GVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMAD 87
             VL+H Y    ++  A++ + +M+ +G   D  +YNSLI   C V++    + VL  M  
Sbjct: 272  SVLVHTYGLENRIEDAIDTFLEMEKNGVEADVAVYNSLISAFCKVNKFQNVYMVLNDMQI 331

Query: 86   EGVGPNARTYNIILLYLVQKGVIKDA 9
            +GV PNART NIIL  L+ +G   DA
Sbjct: 332  KGVSPNARTCNIILSGLIARGETDDA 357



 Score = 68.2 bits (165), Expect = 7e-09
 Identities = 42/161 (26%), Positives = 78/161 (48%)
 Frame = -3

Query: 485 KSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLED 306
           +++ I++  + + Q        FH M    + PN+ A+   + ALC+   VE+A +   D
Sbjct: 130 ETFCIIMRKYARAQKVEETLYTFHIMNKFDVPPNLAAFNGLLSALCKSKNVEKAQEIF-D 188

Query: 305 MRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSE 126
            +  +  P++  Y +LI  +     +P+A EVYR+M   GC PD   Y  ++  LC    
Sbjct: 189 TKKNEFTPDSKTYSILIEGWGRAPNLPKAREVYREMIEVGCNPDIVTYGIMVDILCKAGR 248

Query: 125 EGLAHQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
              A ++++ M   G  P +  Y++++     +  I+DA D
Sbjct: 249 VDEAVEIVKEMDFSGCRPTSFIYSVLVHTYGLENRIEDAID 289


>ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Solanum tuberosum]
          Length = 478

 Score =  232 bits (592), Expect = 2e-58
 Identities = 115/318 (36%), Positives = 184/318 (57%)
 Frame = -3

Query: 962 PNTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVIT 783
           P   +  EL++S I+V P+   ++LKRFE++G+  YRFF+W   Q  YE+   AYH +I 
Sbjct: 44  PKAGLDTELDQSGIRVLPEMVEDVLKRFENAGMLAYRFFEWAGKQHNYEHSTRAYHSMIG 103

Query: 782 CLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEA 603
            L ++R + + W + +EM TK++L  + F I+MR YA+A K E  L  FH M K      
Sbjct: 104 SLAKIRQYQMMWDLVNEMKTKRMLNIETFCIIMRKYARAQKVEETLYTFHIMNK-FDVPP 162

Query: 602 GIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDA 423
            +  FN  L  LCKS   E A ++F+   +   +F PD+K+Y+ILIE WG+  N  +   
Sbjct: 163 NLAAFNGLLSALCKSKNVEKAQEIFD---SKKNEFTPDSKTYSILIEGWGRAPNLPKARE 219

Query: 422 LFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYC 243
           ++ +M+  G  P+++ Y + +  LC+   V+EA + +++M +  C P ++ Y VL+H Y 
Sbjct: 220 VYREMIEAGCNPDIVTYGIMVDILCKAGRVDEAVEIVKEMDFSGCRPTSFIYSVLVHTYG 279

Query: 242 ARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNAR 63
              ++  A++ + +M+ +G   D  +YNSLI   C V++    + VL  M  +GV PNAR
Sbjct: 280 LENRIEDAIDTFLEMEKNGVEADVAVYNSLISAFCKVNKFQNVYMVLNDMQFKGVTPNAR 339

Query: 62  TYNIILLYLVQKGVIKDA 9
           T NIIL  L+ +G   DA
Sbjct: 340 TCNIILSGLIARGETDDA 357



 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 42/161 (26%), Positives = 78/161 (48%)
 Frame = -3

Query: 485 KSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLED 306
           +++ I++  + + Q        FH M    + PN+ A+   + ALC+   VE+A +   D
Sbjct: 130 ETFCIIMRKYARAQKVEETLYTFHIMNKFDVPPNLAAFNGLLSALCKSKNVEKAQEIF-D 188

Query: 305 MRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSE 126
            +  +  P++  Y +LI  +     +P+A EVYR+M   GC PD   Y  ++  LC    
Sbjct: 189 SKKNEFTPDSKTYSILIEGWGRAPNLPKAREVYREMIEAGCNPDIVTYGIMVDILCKAGR 248

Query: 125 EGLAHQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
              A ++++ M   G  P +  Y++++     +  I+DA D
Sbjct: 249 VDEAVEIVKEMDFSGCRPTSFIYSVLVHTYGLENRIEDAID 289


>gb|EOY00910.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao] gi|508709014|gb|EOY00911.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 1 [Theobroma cacao]
          Length = 545

 Score =  228 bits (581), Expect = 4e-57
 Identities = 114/314 (36%), Positives = 186/314 (59%)
 Frame = -3

Query: 950  ITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVITCLGR 771
            + K LE + I+V+P    E+LKR  ++G+    FF W + Q+G++   E+Y+ +I  LG+
Sbjct: 109  VDKLLENASIEVSPSLVAEVLKRLSNAGVIAMSFFTWAEKQKGFKYNTESYNALIEALGK 168

Query: 770  LRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEAGIDD 591
            ++ F L W + ++M + K+L+K  F ++ R YA+A K E A+E F +ME+  GF+    D
Sbjct: 169  IKQFKLIWNLLNDMKSSKLLSKDTFALISRRYARARKVEEAIEAFERMEE-FGFKLDTSD 227

Query: 590  FNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDALFHD 411
            FN  + TL KS   E A++VF+KM     +FVPD KSYTIL+E WGKE N  R D ++ +
Sbjct: 228  FNRLIDTLSKSRHVEKANKVFDKMKK--RRFVPDIKSYTILLEGWGKEHNLLRLDEVYRE 285

Query: 410  MLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCARRK 231
            M  +G  P+V+ Y + ++A C+      A +   +M    C P+ + +  LI+   + ++
Sbjct: 286  MKDEGFEPDVVTYGILINAYCKAKKYNRAVELFHEMEAKNCKPSPHVFCTLINGLGSEKR 345

Query: 230  VPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNI 51
            +  A+E + + K  G  P+AP YNSL+   C   +   A +V+  M    VGPN+RTY+I
Sbjct: 346  LSEALEFFERSKSCGFAPEAPTYNSLVGAYCWSMQMDDAFRVIGEMRRNLVGPNSRTYDI 405

Query: 50   ILLYLVQKGVIKDA 9
            IL +L++   +K+A
Sbjct: 406  ILHHLIKARRMKEA 419


>gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
            gi|227463006|gb|ACP39955.1| pentatricopeptide repeat
            protein [Gossypium hirsutum]
          Length = 547

 Score =  227 bits (579), Expect = 7e-57
 Identities = 117/305 (38%), Positives = 179/305 (58%)
 Frame = -3

Query: 944  KELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVITCLGRLR 765
            K LE + IKV+P   VE+LKR  ++G+    FF W + Q+G++   E+Y+ +I  LG+++
Sbjct: 112  KLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKGFKYNTESYNALIEALGKIK 171

Query: 764  NFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEAGIDDFN 585
             F L   + +EM ++K+L K  F ++ R +A+A K E A+E F +ME+  GF+    DFN
Sbjct: 172  QFKLIRSLVNEMKSRKLLNKDTFALISRRHARARKVEEAIEAFERMEE-FGFKLETSDFN 230

Query: 584  DFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDALFHDML 405
              L TLCKS   E A++VF+KM     +FVPD KSYTIL+E WGKE N  R D ++ +M 
Sbjct: 231  RLLDTLCKSRHVEKANKVFDKMKK--RRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEMK 288

Query: 404  GKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVP 225
              G  P+V+ Y + + A C+    + A +   +M    C P  + Y  LI+   + +++ 
Sbjct: 289  YDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLS 348

Query: 224  RAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNIIL 45
             A+E + + K  G TP+AP YNSL+   C       A QV+  M     GPN+RTY+IIL
Sbjct: 349  EALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIIL 408

Query: 44   LYLVQ 30
             +L++
Sbjct: 409  HHLIK 413


>gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis]
          Length = 551

 Score =  227 bits (578), Expect = 1e-56
 Identities = 111/310 (35%), Positives = 189/310 (60%)
 Frame = -3

Query: 959  NTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVITC 780
            N  +   L+   ++++    VE+LK+  +SG+    FF+W + Q+G+++  E+Y  +I  
Sbjct: 115  NDSVESFLDNIHVEMSATLVVEVLKKLSNSGVLALSFFRWAEKQKGFKHTTESYDALIEA 174

Query: 779  LGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEAG 600
            LG+++ F   W + DEM  K++LTK  F ++ R YA+A KA+ A+E F +M K  G +A 
Sbjct: 175  LGKIKQFKKIWNLVDEMKLKRLLTKNTFALISRRYARAKKAKEAIETFRKMRK-FGLKAE 233

Query: 599  IDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDAL 420
            + DFN  L TLCKS     A QVF++M+  +++F PD KSYTIL+E WG+E+N  +   +
Sbjct: 234  VSDFNRLLDTLCKSKFATIAQQVFDEMS--EKRFKPDIKSYTILLEGWGQEKNLLKLKEV 291

Query: 419  FHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCA 240
            + +M  +GI P+V+ Y + ++A C+    +EA    ++M    C P+ + +  LI    +
Sbjct: 292  YREMKDEGIEPDVVTYGIMINAHCKARKYDEAFALFDEMEANNCKPSPHIFCTLIIGLGS 351

Query: 239  RRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNART 60
             +++  A+EV+R+ K  G  P+ P YN+L+   C   +   A++V+  M + GVGPN+RT
Sbjct: 352  AKRLNEALEVFRRSKACGFEPEVPTYNALVGAYCWSMQLDNAYKVVDEMRECGVGPNSRT 411

Query: 59   YNIILLYLVQ 30
            Y+IIL +L++
Sbjct: 412  YDIILHHLIK 421


>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  226 bits (575), Expect = 2e-56
 Identities = 113/346 (32%), Positives = 204/346 (58%)
 Frame = -3

Query: 1046 AEQKPATKSDDDDEETXXXXXXXXXXXKPNTDITKELEKSKIKVTPKQTVEILKRFEHSG 867
            A QK   +SD+  ++             PN+ I   L+ + ++++P   VE+LK+  ++G
Sbjct: 79   ASQKSIVESDEIAQDAEKFCKLISKN--PNSCIESLLDGAPMELSPALIVEVLKKLSNAG 136

Query: 866  IQGYRFFQWTQNQEGYENEVEAYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFIL 687
                 FF+W + Q+G+++  E+Y+ +I  LG+++ F++ W +  +M  K IL+++ F ++
Sbjct: 137  FLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRETFALI 196

Query: 686  MRWYAKAWKAESALEGFHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPD 507
             R YA+A K + A+E F +MEK  GF+ G+ DFN  L TLCKS   + A +VF+KM    
Sbjct: 197  TRRYARARKVKEAVESFEKMEK-FGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMK--H 253

Query: 506  EQFVPDAKSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEE 327
             +F PD KSYTIL+E WG++QN  + + ++ +M  +G  P+V+ + + ++A C+    +E
Sbjct: 254  GRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDE 313

Query: 326  AADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIK 147
            A     +M      P+ + +  LI+   + +++  A+E + ++KL G  P+AP YN+++ 
Sbjct: 314  AIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVG 373

Query: 146  GLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDA 9
              C   +   A++++  M   GVGPN+RTY+IIL +L++    K+A
Sbjct: 374  AYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEA 419


>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  226 bits (575), Expect = 2e-56
 Identities = 113/346 (32%), Positives = 204/346 (58%)
 Frame = -3

Query: 1046 AEQKPATKSDDDDEETXXXXXXXXXXXKPNTDITKELEKSKIKVTPKQTVEILKRFEHSG 867
            A QK   +SD+  ++             PN+ I   L+ + ++++P   VE+LK+  ++G
Sbjct: 79   ASQKSIVESDEIAQDAEKFCKLISKN--PNSCIESLLDGAPMELSPALIVEVLKKLSNAG 136

Query: 866  IQGYRFFQWTQNQEGYENEVEAYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFIL 687
                 FF+W + Q+G+++  E+Y+ +I  LG+++ F++ W +  +M  K IL+++ F ++
Sbjct: 137  FLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRETFALI 196

Query: 686  MRWYAKAWKAESALEGFHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPD 507
             R YA+A K + A+E F +MEK  GF+ G+ DFN  L TLCKS   + A +VF+KM    
Sbjct: 197  TRRYARARKVKEAVESFEKMEK-FGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMK--H 253

Query: 506  EQFVPDAKSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEE 327
             +F PD KSYTIL+E WG++QN  + + ++ +M  +G  P+V+ + + ++A C+    +E
Sbjct: 254  GRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDE 313

Query: 326  AADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIK 147
            A     +M      P+ + +  LI+   + +++  A+E + ++KL G  P+AP YN+++ 
Sbjct: 314  AIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVG 373

Query: 146  GLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDA 9
              C   +   A++++  M   GVGPN+RTY+IIL +L++    K+A
Sbjct: 374  AYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEA 419


>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial [Vitis vinifera]
          Length = 531

 Score =  224 bits (571), Expect = 6e-56
 Identities = 111/317 (35%), Positives = 185/317 (58%)
 Frame = -3

Query: 959  NTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVITC 780
            N+ I   L  + + V+P   +E+LK+  +SG+    FF+W + Q+G++   E Y+ +I  
Sbjct: 95   NSSIESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEA 154

Query: 779  LGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEAG 600
            LG+++ F + W + ++M +K +LT++ F ++ R YA+A K + A+E F +MEK  G +  
Sbjct: 155  LGKIKQFKMIWNLVNDMRSKGLLTQETFALISRRYARARKVKEAVETFEKMEK-FGLQPV 213

Query: 599  IDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDAL 420
            + DFN  L  LCKS   E A +VF+KM   D +F PD KSYTIL+E WG+EQN  R D +
Sbjct: 214  LSDFNRLLDALCKSRHVERAQEVFDKMK--DRKFRPDIKSYTILLEGWGQEQNLLRLDEV 271

Query: 419  FHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCA 240
            + +M  +G  P+ + Y + ++A C+    + A +    M   KC P  + Y  LI+   +
Sbjct: 272  YREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGS 331

Query: 239  RRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNART 60
             R++  A++ + + K  G TP+AP YN+++   C       A++++  M   GVGP  RT
Sbjct: 332  ERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRT 391

Query: 59   YNIILLYLVQKGVIKDA 9
            Y+IIL +L++    K+A
Sbjct: 392  YDIILHHLIKARRTKEA 408


>ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
           gi|449499065|ref|XP_004160711.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  223 bits (569), Expect = 1e-55
 Identities = 107/310 (34%), Positives = 183/310 (59%)
 Frame = -3

Query: 938 LEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVITCLGRLRNF 759
           L+++ I+++P+    +L+RFE++G+  YRFF+W   Q  Y + V AYH +I  L ++R +
Sbjct: 13  LDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAKIRQY 72

Query: 758 DLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEAGIDDFNDF 579
            + W + + M  K+IL  + F I+MR YA+A K E A+  F+ MEK    +  +  FN  
Sbjct: 73  QMVWDLVNAMRNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEK-YNMKPNVAAFNGL 131

Query: 578 LLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDALFHDMLGK 399
           L  LCKS     A ++F+ M    +QFVPD+K+Y+ILIE WG+  N  +   ++ +M+  
Sbjct: 132 LSALCKSKNVRKAQEIFDNMK---DQFVPDSKTYSILIEGWGRAPNLPKAREIYREMIDS 188

Query: 398 GIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVPRA 219
           G +P+ + Y + +  LC+   V+EA + +++M Y  C P+++ Y VL+H Y    ++  A
Sbjct: 189 GCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDA 248

Query: 218 MEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLY 39
           +  + +M+ +G   D   YN+LI   C  ++    ++VL+ M  +GV PN+RT NII+  
Sbjct: 249 VSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINS 308

Query: 38  LVQKGVIKDA 9
           L+ +G   +A
Sbjct: 309 LIGRGETDEA 318



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 63/296 (21%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
 Frame = -3

Query: 809  VEAYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQ 630
            V A++ +++ L + +N   A ++FD M  + +   K + IL+  + +A     A E + +
Sbjct: 125  VAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYRE 184

Query: 629  MEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGK 450
            M  + G       ++  +  LCK+   + A ++ ++M   + +  P +  Y++L+  +G 
Sbjct: 185  MIDS-GCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCK--PSSFIYSVLVHTYGV 241

Query: 449  EQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDM----------- 303
            E       + F +M   G++ +V AY   + A C+ N ++     L+DM           
Sbjct: 242  ENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRT 301

Query: 302  ----------------------RYMK-CPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKL 192
                                  R +K C P+  +Y ++I  +C R+++  A+++++ MK 
Sbjct: 302  CNIIINSLIGRGETDEAFKIFRRMIKVCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKK 361

Query: 191  DGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLYLVQKG 24
                P    ++ LI GLC +     A  +L+ M ++G+ P+  T+  +   L+++G
Sbjct: 362  KQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEG 417



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 52/180 (28%), Positives = 87/180 (48%)
 Frame = -3

Query: 542 AHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVY 363
           A++ FE   +    +V   ++Y  +IE+  K + ++    L + M  K I+ NV A+ + 
Sbjct: 39  AYRFFE-WASKQRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMRNKEIL-NVEAFCII 96

Query: 362 MHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGC 183
           M    R   VEEA  T   M      PN  A+  L+ A C  + V +A E++  MK D  
Sbjct: 97  MRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMK-DQF 155

Query: 182 TPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
            PD+  Y+ LI+G         A ++ + M D G  P+  TY+I++  L + G + +A +
Sbjct: 156 VPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVE 215


>gb|ESW09460.1| hypothetical protein PHAVU_009G129200g [Phaseolus vulgaris]
           gi|561010554|gb|ESW09461.1| hypothetical protein
           PHAVU_009G129200g [Phaseolus vulgaris]
          Length = 480

 Score =  222 bits (566), Expect = 2e-55
 Identities = 108/313 (34%), Positives = 183/313 (58%)
 Frame = -3

Query: 962 PNTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVIT 783
           P   +   L ++ ++V+P     +LKRFE++G+  +RFF+W++ Q GY + + AYH +I 
Sbjct: 46  PTLGLDTALNQTGVRVSPDLVENVLKRFENAGMSAFRFFEWSEKQRGYSHSIRAYHLMIE 105

Query: 782 CLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEA 603
            L ++R + + W + + M  K +L  + F I+MR YA+A K + A+  F+ M+K      
Sbjct: 106 SLAKIRQYQIVWDLVNAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDK-YDVVP 164

Query: 602 GIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDA 423
            +  FN  L  LCKS+    A ++F+ M +   +FVPDAK+Y+IL+E WGK  N  R   
Sbjct: 165 NLAAFNGLLSALCKSNNVRKAQEIFDAMKS---RFVPDAKTYSILLEGWGKAPNLPRARE 221

Query: 422 LFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYC 243
           +F +M+  G  P+V+ Y + +  LC+   V+EA + +++M    C P ++ Y VLIH Y 
Sbjct: 222 VFGEMVRAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDESNCRPTSFIYSVLIHTYG 281

Query: 242 ARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNAR 63
              ++  A++ +++M+  G   D  +YN+LI   C V++    H+VLQ M   GV PN+R
Sbjct: 282 VEHRIEDAIDTFQEMERKGIKADVVVYNALIGAFCKVNKFKNVHRVLQEMEINGVAPNSR 341

Query: 62  TYNIILLYLVQKG 24
           T N+I+  ++ +G
Sbjct: 342 TCNVIISSMIGQG 354



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 51/217 (23%), Positives = 102/217 (47%)
 Frame = -3

Query: 653 SALEGFHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYT 474
           SA   F   EK  G+   I  ++  + +L K    +    V++ + A  ++ + + +++ 
Sbjct: 79  SAFRFFEWSEKQRGYSHSIRAYHLMIESLAKIRQYQI---VWDLVNAMRKKGMLNVETFC 135

Query: 473 ILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYM 294
           I++  + +          F+ M    +VPN+ A+   + ALC+ N V +A +  + M+  
Sbjct: 136 IMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMK-S 194

Query: 293 KCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLA 114
           +  P+A  Y +L+  +     +PRA EV+ +M   GC PD   Y  ++  LC       A
Sbjct: 195 RFVPDAKTYSILLEGWGKAPNLPRAREVFGEMVRAGCDPDVVTYGIMVDVLCKAGRVDEA 254

Query: 113 HQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
            +V++ M +    P +  Y++++     +  I+DA D
Sbjct: 255 VEVVKEMDESNCRPTSFIYSVLIHTYGVEHRIEDAID 291


>ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [Amborella trichopoda]
           gi|548853531|gb|ERN11514.1| hypothetical protein
           AMTR_s00022p00121040 [Amborella trichopoda]
          Length = 438

 Score =  221 bits (564), Expect = 4e-55
 Identities = 111/318 (34%), Positives = 182/318 (57%)
 Frame = -3

Query: 962 PNTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVIT 783
           P   +   L++S ++V+P    +ILKRFE++G+Q YRFFQW   Q  Y + V++YH +I 
Sbjct: 4   PKVGLEHTLDESGVRVSPDLVEDILKRFENAGMQAYRFFQWVDKQINYSHSVKSYHIMIG 63

Query: 782 CLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEA 603
            L ++R + L W + ++M  K IL  + F I++R YA+A K + A+  F+ M+K  G   
Sbjct: 64  SLAKIRQYQLMWDLVNDMRRKDILNNETFCIMIRKYARAHKVDEAVYTFNVMDK-FGLTP 122

Query: 602 GIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDA 423
            +  FN  L   CK+     A ++F+ M    ++F P++ +Y+IL+E WGKE N  +   
Sbjct: 123 NLTAFNSLLSAFCKAKNVRKAQEIFDDMK---DRFEPNSITYSILLEGWGKEPNLPKARE 179

Query: 422 LFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYC 243
           +F +M+ K   P+++ Y + + +LC+   VEEA   +++MR   C P +Y Y +LIH Y 
Sbjct: 180 IFLEMIDKNCEPDIVTYGIMIDSLCKAGRVEEATGYMKEMRSRGCIPTSYIYSILIHTYG 239

Query: 242 ARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNAR 63
             R +  A++ + +M+ DG   D   YN+LI   C   +    ++VL+ M  + V PN+R
Sbjct: 240 VERSIGDAVDSFLEMEKDGIKADVAAYNALISAFCRAKKFKNVYRVLEEMDKKSVAPNSR 299

Query: 62  TYNIILLYLVQKGVIKDA 9
           T NIIL  L+  G   +A
Sbjct: 300 TCNIILNGLIGSGETDEA 317



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 45/212 (21%), Positives = 92/212 (43%)
 Frame = -3

Query: 638 FHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEA 459
           F  ++K + +   +  ++  + +L K    +    +   M   D   + + +++ I+I  
Sbjct: 42  FQWVDKQINYSHSVKSYHIMIGSLAKIRQYQLMWDLVNDMRRKD---ILNNETFCIMIRK 98

Query: 458 WGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPN 279
           + +          F+ M   G+ PN+ A+   + A C+   V +A +  +DM+  +  PN
Sbjct: 99  YARAHKVDEAVYTFNVMDKFGLTPNLTAFNSLLSAFCKAKNVRKAQEIFDDMKD-RFEPN 157

Query: 278 AYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQ 99
           +  Y +L+  +     +P+A E++ +M    C PD   Y  +I  LC       A   ++
Sbjct: 158 SITYSILLEGWGKEPNLPKAREIFLEMIDKNCEPDIVTYGIMIDSLCKAGRVEEATGYMK 217

Query: 98  MMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
            M   G  P +  Y+I++     +  I DA D
Sbjct: 218 EMRSRGCIPTSYIYSILIHTYGVERSIGDAVD 249


>ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334980|gb|EFH65398.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  221 bits (563), Expect = 5e-55
 Identities = 110/320 (34%), Positives = 182/320 (56%)
 Frame = -3

Query: 962 PNTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVIT 783
           P   I   L++S ++V+P+   ++L RF ++G+  YRFFQW++ Q  YE+ V AYH +I 
Sbjct: 48  PQLVIDSALDQSGLRVSPEVVEDVLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIE 107

Query: 782 CLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEA 603
              ++R + L W + + M  KK+L  + F I+MR YA+A K + A+  F+ MEK      
Sbjct: 108 STAKIRQYKLMWDLINAMMKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEK-YDLPP 166

Query: 602 GIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDA 423
            +  FN  L  LCKS     A ++FE M    ++F PD+K+Y+IL+E WGKE N  +   
Sbjct: 167 NLVAFNGLLSALCKSKNVRKAQEIFENMR---DRFTPDSKTYSILLEGWGKEPNLPKARE 223

Query: 422 LFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYC 243
           +F +M+  G +P+++ Y + +  LC+   V+EA   +  M    C P  + Y VL+H Y 
Sbjct: 224 VFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYG 283

Query: 242 ARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNAR 63
              ++  A++ + +M+  G   D  ++NSLI   C  +     ++VL+ M  +GV PN++
Sbjct: 284 TETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSK 343

Query: 62  TYNIILLYLVQKGVIKDACD 3
           + NIIL +L+ +G   +A D
Sbjct: 344 SCNIILRHLIDRGEKDEAFD 363


>ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529358|gb|EEF31324.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  220 bits (561), Expect = 9e-55
 Identities = 115/338 (34%), Positives = 192/338 (56%)
 Frame = -3

Query: 1043 EQKPATKSDDDDEETXXXXXXXXXXXKPNTDITKELEKSKIKVTPKQTVEILKRFEHSGI 864
            EQ P   +D   E+T            PN+ I K L  +  KV+P   +E+LKR  ++G 
Sbjct: 71   EQNPEIFTDKIIEDTRNICRLLSKN--PNSSIEKLLLGASFKVSPALVLEVLKRLSNAGA 128

Query: 863  QGYRFFQWTQNQEGYENEVEAYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFILM 684
                FF+W + Q+G+    E+Y+ +I  LG+++ F++ W + ++M  K +LTK+ F ++ 
Sbjct: 129  LALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKETFALIS 188

Query: 683  RWYAKAWKAESALEGFHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDE 504
            R YA++ K + A+  F +MEK  G +    DFN  L TL KS     A  VF+KM     
Sbjct: 189  RRYARSGKVKEAMNTFEKMEK-FGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKI--R 245

Query: 503  QFVPDAKSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEA 324
            +FVPD KSYTIL+E WG+E+N  + D ++ +M  +G  P+V+ Y + ++A C+V   ++A
Sbjct: 246  RFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDA 305

Query: 323  ADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKG 144
             +   +M    C P+ + +  LI+   + R++  A+E +R+ K  G  P+ P YN+++  
Sbjct: 306  IELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGA 365

Query: 143  LCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLYLVQ 30
             C       A++++  M   GVGPN+RTY+IIL +L++
Sbjct: 366  YCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIK 403



 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 62/270 (22%), Positives = 108/270 (40%), Gaps = 2/270 (0%)
 Frame = -3

Query: 827 EGYENEVEAYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFI-LMRWYAKAWKAES 651
           EG+E +V  Y  +I    ++R +D A ++F EM +K        F  L+       +   
Sbjct: 280 EGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSE 339

Query: 650 ALEGFHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTI 471
           ALE F +  K  GF      +N  +   C S   + A+++ ++M                
Sbjct: 340 ALE-FFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRK-------------- 384

Query: 470 LIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMK 291
                                   G+ PN   Y + +H L +     EA    E M   +
Sbjct: 385 -----------------------SGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEE 421

Query: 290 -CPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLA 114
            C P    Y +++  +C   KV  A++V+ +MK  G  P   +++ LI  LC  ++  +A
Sbjct: 422 ECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIA 481

Query: 113 HQVLQMMADEGVGPNARTYNIILLYLVQKG 24
            +  Q M D G+ P A  ++ +   L++ G
Sbjct: 482 CKYFQEMLDVGIRPPAALFSHLKQALIEDG 511


>gb|EOY16398.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508724502|gb|EOY16399.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724503|gb|EOY16400.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724504|gb|EOY16401.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724505|gb|EOY16402.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 480

 Score =  219 bits (559), Expect = 2e-54
 Identities = 108/310 (34%), Positives = 182/310 (58%)
 Frame = -3

Query: 938 LEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVITCLGRLRNF 759
           L++S ++V P+   ++LKRFE++G+  YRFF+W + Q  Y + + AYH +I  L ++R +
Sbjct: 54  LDQSGLRVPPEVVEDVLKRFENAGMLAYRFFEWAEKQRNYMHSIRAYHTMIESLAKIRQY 113

Query: 758 DLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEAGIDDFNDF 579
            + W + ++M  K +L  + F I+MR YA+  K E  +  F+ MEK       +  FN  
Sbjct: 114 QIMWDLVNKMRNKSMLNVETFCIIMRRYARVQKVEETVYTFNIMEK-YDVPPNLAAFNGL 172

Query: 578 LLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDALFHDMLGK 399
           L TLCKS     A ++F+KM    ++FVPD+K+Y+IL+E WG+  N  +   +F +M+  
Sbjct: 173 LSTLCKSKNVRKAQEIFDKMK---DRFVPDSKTYSILLEGWGRAPNLPKAREIFREMVDM 229

Query: 398 GIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVPRA 219
           G  P+++ Y + +  LC+   V+EA + + +M    C P ++ Y VL+H Y    ++  A
Sbjct: 230 GCDPDIVTYGIMVDILCKSGRVDEAIEIVREMDSNGCRPTSFIYSVLVHTYGIENRIEDA 289

Query: 218 MEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLY 39
           ++ + +M+ +G   D  +YN+LI   C V++    ++VL  M  +GV PNART NIIL  
Sbjct: 290 VDAFLEMERNGIKADVVVYNALIGAFCKVNKLKNVYRVLNEMDSKGVAPNARTCNIILNS 349

Query: 38  LVQKGVIKDA 9
           L+ +G   +A
Sbjct: 350 LIGRGETDEA 359



 Score = 96.3 bits (238), Expect = 3e-17
 Identities = 67/266 (25%), Positives = 128/266 (48%)
 Frame = -3

Query: 803 AYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQME 624
           A++ +++ L + +N   A ++FD+M  + +   K + IL+  + +A     A E F +M 
Sbjct: 168 AFNGLLSTLCKSKNVRKAQEIFDKMKDRFVPDSKTYSILLEGWGRAPNLPKAREIFREMV 227

Query: 623 KTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQ 444
             +G +  I  +   +  LCKS   + A ++  +M +   +  P +  Y++L+  +G E 
Sbjct: 228 D-MGCDPDIVTYGIMVDILCKSGRVDEAIEIVREMDSNGCR--PTSFIYSVLVHTYGIEN 284

Query: 443 NWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYG 264
                   F +M   GI  +V+ Y   + A C+VN ++     L +M      PNA    
Sbjct: 285 RIEDAVDAFLEMERNGIKADVVVYNALIGAFCKVNKLKNVYRVLNEMDSKGVAPNARTCN 344

Query: 263 VLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADE 84
           +++++   R +   A +V+R+M +  C PDA  Y  +IK  C   E  +A +V + M  +
Sbjct: 345 IILNSLIGRGETDEAFKVFRRM-IKECEPDADTYTIMIKMFCDRDELDMAFKVWKYMRLK 403

Query: 83  GVGPNARTYNIILLYLVQKGVIKDAC 6
              P   T+++++  L +KG    AC
Sbjct: 404 QFIPTMHTFSVLIHGLCEKGNAAKAC 429



 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 44/212 (20%), Positives = 95/212 (44%)
 Frame = -3

Query: 638 FHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEA 459
           F   EK   +   I  ++  + +L K    +    +  KM     + + + +++ I++  
Sbjct: 84  FEWAEKQRNYMHSIRAYHTMIESLAKIRQYQIMWDLVNKMR---NKSMLNVETFCIIMRR 140

Query: 458 WGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPN 279
           + + Q        F+ M    + PN+ A+   +  LC+   V +A +  + M+  +  P+
Sbjct: 141 YARVQKVEETVYTFNIMEKYDVPPNLAAFNGLLSTLCKSKNVRKAQEIFDKMKD-RFVPD 199

Query: 278 AYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQ 99
           +  Y +L+  +     +P+A E++R+M   GC PD   Y  ++  LC       A ++++
Sbjct: 200 SKTYSILLEGWGRAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKSGRVDEAIEIVR 259

Query: 98  MMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
            M   G  P +  Y++++     +  I+DA D
Sbjct: 260 EMDSNGCRPTSFIYSVLVHTYGIENRIEDAVD 291


>ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 484

 Score =  219 bits (557), Expect = 3e-54
 Identities = 107/318 (33%), Positives = 186/318 (58%)
 Frame = -3

Query: 962 PNTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVIT 783
           P   +   L++S ++++P+   ++L RF+++G+  YRFF+W   Q  Y + V+AYH +I 
Sbjct: 50  PTLALDTALDQSGVRISPEIVEDVLVRFKNAGMVAYRFFEWAGKQRNYTHSVKAYHAMID 109

Query: 782 CLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEA 603
            L ++R + + W++ + M T+++   + F I+MR YA+A K E AL  F+ MEK      
Sbjct: 110 SLAKIRQYQIMWELVNSMRTQRMQNMETFSIIMRKYARAQKVEEALYTFNVMEK-YDCAP 168

Query: 602 GIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDA 423
            +  FND L  LCKS     A ++F+KM    ++FVPD+K+++ILI+ WGK+ N  +   
Sbjct: 169 NLAAFNDLLSALCKSKNVRKAQEIFDKMK---DRFVPDSKTFSILIDGWGKDPNLPKARE 225

Query: 422 LFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYC 243
           ++ +M+  G +P+++ Y + +  LC+   V+E  + +  M    C P ++ Y VL+H Y 
Sbjct: 226 VYREMVDAGCIPDIVTYGIMVDVLCKAGRVDEGIEIVRGMVASGCMPTSFIYSVLVHTYG 285

Query: 242 ARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNAR 63
              ++  A+E + +M+ +G   D  IYN+LI   C V++    ++VL  M  + V PN+R
Sbjct: 286 VEDRIEDAVEAFLEMERNGIKADVAIYNALIGAFCKVNKFKNVYRVLSDMKSKAVVPNSR 345

Query: 62  TYNIILLYLVQKGVIKDA 9
           T NIIL  L+ +G   +A
Sbjct: 346 TCNIILHSLIDRGETDEA 363



 Score = 92.0 bits (227), Expect = 5e-16
 Identities = 66/266 (24%), Positives = 122/266 (45%)
 Frame = -3

Query: 803 AYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQME 624
           A++ +++ L + +N   A ++FD+M  + +   K F IL+  + K      A E + +M 
Sbjct: 172 AFNDLLSALCKSKNVRKAQEIFDKMKDRFVPDSKTFSILIDGWGKDPNLPKAREVYREMV 231

Query: 623 KTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQ 444
              G    I  +   +  LCK+   +   ++   M A     +P +  Y++L+  +G E 
Sbjct: 232 DA-GCIPDIVTYGIMVDVLCKAGRVDEGIEIVRGMVASG--CMPTSFIYSVLVHTYGVED 288

Query: 443 NWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYG 264
                   F +M   GI  +V  Y   + A C+VN  +     L DM+     PN+    
Sbjct: 289 RIEDAVEAFLEMERNGIKADVAIYNALIGAFCKVNKFKNVYRVLSDMKSKAVVPNSRTCN 348

Query: 263 VLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADE 84
           +++H+   R +   A  V+RKM +  C PDA  Y  +IK  C  ++  +A ++ + M  +
Sbjct: 349 IILHSLIDRGETDEAFSVFRKM-IKICDPDADTYTMMIKMFCERNKLEMASKLWKYMKMK 407

Query: 83  GVGPNARTYNIILLYLVQKGVIKDAC 6
              P+  TY++++  L + G    AC
Sbjct: 408 QFIPSMHTYSVLINGLCENGNASKAC 433



 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 39/177 (22%), Positives = 85/177 (48%)
 Frame = -3

Query: 533 VFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHA 354
           ++E + +   Q + + ++++I++  + + Q        F+ M      PN+ A+   + A
Sbjct: 120 MWELVNSMRTQRMQNMETFSIIMRKYARAQKVEEALYTFNVMEKYDCAPNLAAFNDLLSA 179

Query: 353 LCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPD 174
           LC+   V +A +  + M+  +  P++  + +LI  +     +P+A EVYR+M   GC PD
Sbjct: 180 LCKSKNVRKAQEIFDKMKD-RFVPDSKTFSILIDGWGKDPNLPKAREVYREMVDAGCIPD 238

Query: 173 APIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
              Y  ++  LC         ++++ M   G  P +  Y++++     +  I+DA +
Sbjct: 239 IVTYGIMVDVLCKAGRVDEGIEIVRGMVASGCMPTSFIYSVLVHTYGVEDRIEDAVE 295


>gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  218 bits (556), Expect = 3e-54
 Identities = 116/357 (32%), Positives = 190/357 (53%)
 Frame = -3

Query: 1073 CNILLSARLAEQKPATKSDDDDEETXXXXXXXXXXXKPNTDITKELEKSKIKVTPKQTVE 894
            C   LSARL       +   D  +             P   +   L++S ++V+ +   +
Sbjct: 14   CKSFLSARLYSSSEQVRDVADVAKNISKVLMSS----PQLVLDSALDQSGLRVSQEVVED 69

Query: 893  ILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVITCLGRLRNFDLAWQVFDEMSTKKI 714
            +L RF ++G+  YRFFQW++ Q  YE+ V AYH +I    ++R + L W + + M  KK+
Sbjct: 70   VLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM 129

Query: 713  LTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQ 534
            L  + F I+MR YA+A K + A+  F+ MEK       +  FN  L  LCKS     A +
Sbjct: 130  LNVETFCIVMRKYARAQKVDEAIYAFNVMEK-YDLPPNLVAFNGLLSALCKSKNVRKAQE 188

Query: 533  VFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHA 354
            VFE M    ++F PD+K+Y+IL+E WGKE N  +   +F +M+  G  P+++ Y + +  
Sbjct: 189  VFENMR---DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDI 245

Query: 353  LCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPD 174
            LC+   V+EA   +  M    C P  + Y VL+H Y    ++  A++ + +M+  G   D
Sbjct: 246  LCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 305

Query: 173  APIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
              ++NSLI   C  +     ++VL+ M  +GV PN+++ NIIL +L+++G   +A D
Sbjct: 306  VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFD 362


>ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g77360, mitochondrial; Flags: Precursor
            gi|332197848|gb|AEE35969.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  218 bits (556), Expect = 3e-54
 Identities = 116/357 (32%), Positives = 190/357 (53%)
 Frame = -3

Query: 1073 CNILLSARLAEQKPATKSDDDDEETXXXXXXXXXXXKPNTDITKELEKSKIKVTPKQTVE 894
            C   LSARL       +   D  +             P   +   L++S ++V+ +   +
Sbjct: 50   CKSFLSARLYSSSEQVRDVADVAKNISKVLMSS----PQLVLDSALDQSGLRVSQEVVED 105

Query: 893  ILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVITCLGRLRNFDLAWQVFDEMSTKKI 714
            +L RF ++G+  YRFFQW++ Q  YE+ V AYH +I    ++R + L W + + M  KK+
Sbjct: 106  VLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM 165

Query: 713  LTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQ 534
            L  + F I+MR YA+A K + A+  F+ MEK       +  FN  L  LCKS     A +
Sbjct: 166  LNVETFCIVMRKYARAQKVDEAIYAFNVMEK-YDLPPNLVAFNGLLSALCKSKNVRKAQE 224

Query: 533  VFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHA 354
            VFE M    ++F PD+K+Y+IL+E WGKE N  +   +F +M+  G  P+++ Y + +  
Sbjct: 225  VFENMR---DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDI 281

Query: 353  LCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPD 174
            LC+   V+EA   +  M    C P  + Y VL+H Y    ++  A++ + +M+  G   D
Sbjct: 282  LCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 341

Query: 173  APIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
              ++NSLI   C  +     ++VL+ M  +GV PN+++ NIIL +L+++G   +A D
Sbjct: 342  VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFD 398


>ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568837650|ref|XP_006472836.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X2 [Citrus sinensis]
           gi|568837652|ref|XP_006472837.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X3 [Citrus sinensis]
           gi|568837654|ref|XP_006472838.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X4 [Citrus sinensis]
          Length = 480

 Score =  218 bits (555), Expect = 4e-54
 Identities = 107/318 (33%), Positives = 187/318 (58%)
 Frame = -3

Query: 962 PNTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVIT 783
           P   +   L++S I+V+P+   ++L++F+++G   + FF+WT+ Q+ YE+ V AYH +I 
Sbjct: 46  PKVVLDTALDQSGIRVSPEIVEDVLEKFKNAGTLAFCFFKWTEKQQNYEHSVRAYHSMIE 105

Query: 782 CLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEA 603
            L ++R + + W + + M TK++L  + F I+MR YA+  K E A+  F+ M+K  G   
Sbjct: 106 SLAKIRQYQIMWDLVNAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQK-YGVTQ 164

Query: 602 GIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDA 423
            +  FN  L  LCKS     A ++F+ M    ++F+PD+K+Y+IL+E WGK+ N  R   
Sbjct: 165 NLAAFNGLLSALCKSKNVRKAQEIFDCMK---DRFIPDSKTYSILLEGWGKDPNLPRARE 221

Query: 422 LFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYC 243
           +F +M+  G  P+++ Y + +  LC+   V+EA   ++ M    C P ++ Y VL+H Y 
Sbjct: 222 IFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYG 281

Query: 242 ARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNAR 63
              ++  A++ + +M+ +G   D  +YN+LI   C  ++    ++VL+ M  +GV PN+R
Sbjct: 282 VENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSR 341

Query: 62  TYNIILLYLVQKGVIKDA 9
           T NIIL  L+ +G   +A
Sbjct: 342 TCNIILNGLIGRGETDEA 359



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 67/273 (24%), Positives = 124/273 (45%)
 Frame = -3

Query: 824 GYENEVEAYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESAL 645
           G    + A++ +++ L + +N   A ++FD M  + I   K + IL+  + K      A 
Sbjct: 161 GVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAR 220

Query: 644 EGFHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILI 465
           E F +M  T G    I  +   +  LCK+   + A  + + M +   +  P +  Y++L+
Sbjct: 221 EIFREMVDT-GCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSTVCR--PTSFIYSVLV 277

Query: 464 EAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCP 285
             +G E         F +M   GI+ +V  Y   + A C+ N  +     L+DM      
Sbjct: 278 HTYGVENRIEDAVDTFLEMEKNGILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVA 337

Query: 284 PNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQV 105
           PN+    ++++    R +   A  V+R+M +  C  DA  Y  +IK  C   E   A +V
Sbjct: 338 PNSRTCNIILNGLIGRGETDEAYRVFRRM-IKLCEADADTYTMMIKMFCQGGELEKAFKV 396

Query: 104 LQMMADEGVGPNARTYNIILLYLVQKGVIKDAC 6
            + M  +   P+  T+++++  L  KG++ D+C
Sbjct: 397 WKYMKLKRFIPSMHTFSVLINGLCDKGIVSDSC 429



 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 44/212 (20%), Positives = 97/212 (45%)
 Frame = -3

Query: 638 FHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEA 459
           F   EK   +E  +  ++  + +L K    +    +++ + A   + + + +++ I++  
Sbjct: 84  FKWTEKQQNYEHSVRAYHSMIESLAKIRQYQI---MWDLVNAMRTKRMLNVETFCIIMRK 140

Query: 458 WGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPN 279
           + + Q        F+ M   G+  N+ A+   + ALC+   V +A +  + M+  +  P+
Sbjct: 141 YARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMKD-RFIPD 199

Query: 278 AYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQ 99
           +  Y +L+  +     +PRA E++R+M   GC PD   Y  ++  LC       A  +++
Sbjct: 200 SKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVK 259

Query: 98  MMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
            M      P +  Y++++     +  I+DA D
Sbjct: 260 SMDSTVCRPTSFIYSVLVHTYGVENRIEDAVD 291


>gb|EMJ25423.1| hypothetical protein PRUPE_ppa017885mg [Prunus persica]
          Length = 464

 Score =  218 bits (555), Expect = 4e-54
 Identities = 108/318 (33%), Positives = 182/318 (57%)
 Frame = -3

Query: 962 PNTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVIT 783
           P   +   L++S I+++P+   E+L RF+++G+  YRFF+W   Q  Y + V+AYH +I 
Sbjct: 30  PTLALDTALDQSGIRISPEMVEEVLMRFQNAGMVAYRFFEWAGKQRNYTHSVKAYHAMIE 89

Query: 782 CLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEA 603
            L ++R + + W++ + M  K++   + F I+MR YA+A K E AL  F+ MEK      
Sbjct: 90  SLAKIRQYQIMWELVNSMRAKRMQNMETFSIIMRKYARAQKVEEALYTFNVMEK-YDCAP 148

Query: 602 GIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDA 423
            +  FN  L  LCKS     A ++F+KM    ++F PD+K+Y+ILI+ WGK+ N  +   
Sbjct: 149 NLAAFNGLLSALCKSKNVRKAQEIFDKMK---DRFEPDSKTYSILIDGWGKDPNLPKARE 205

Query: 422 LFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYC 243
           +F +M   G  P+++ Y + +  LC+   V+EA + +  M    C P ++ Y VL+H Y 
Sbjct: 206 VFREMTDAGCNPDIVTYGIMVDVLCKAGRVDEAIEIVRGMDDSGCTPTSFIYSVLVHTYG 265

Query: 242 ARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNAR 63
              ++  A++ + +M+ +G   D  +YN+LI   C  ++    ++VL  M  +GV PN+R
Sbjct: 266 VEHRIEDAVDAFLEMERNGIKADVVVYNALIGAFCKANKFKNVYRVLNDMDSKGVKPNSR 325

Query: 62  TYNIILLYLVQKGVIKDA 9
           T NIIL  L+ +G   +A
Sbjct: 326 TCNIILNSLIDRGETDEA 343



 Score = 93.6 bits (231), Expect = 2e-16
 Identities = 68/266 (25%), Positives = 119/266 (44%)
 Frame = -3

Query: 803 AYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQME 624
           A++ +++ L + +N   A ++FD+M  +     K + IL+  + K      A E F +M 
Sbjct: 152 AFNGLLSALCKSKNVRKAQEIFDKMKDRFEPDSKTYSILIDGWGKDPNLPKAREVFREMT 211

Query: 623 KTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQ 444
              G    I  +   +  LCK+   + A ++   M   D    P +  Y++L+  +G E 
Sbjct: 212 DA-GCNPDIVTYGIMVDVLCKAGRVDEAIEIVRGMD--DSGCTPTSFIYSVLVHTYGVEH 268

Query: 443 NWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYG 264
                   F +M   GI  +V+ Y   + A C+ N  +     L DM      PN+    
Sbjct: 269 RIEDAVDAFLEMERNGIKADVVVYNALIGAFCKANKFKNVYRVLNDMDSKGVKPNSRTCN 328

Query: 263 VLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADE 84
           +++++   R +   A  V+RKM +  C PDA  Y  +IK  C   E  +A +V + M   
Sbjct: 329 IILNSLIDRGETDEAFSVFRKM-IKLCEPDADTYTMMIKMFCEKDELEMALKVWKYMKQR 387

Query: 83  GVGPNARTYNIILLYLVQKGVIKDAC 6
              P+  TY++++  L +KG    AC
Sbjct: 388 RFVPSMHTYSVLINGLCEKGNTSKAC 413



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 40/161 (24%), Positives = 79/161 (49%)
 Frame = -3

Query: 485 KSYTILIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLED 306
           ++++I++  + + Q        F+ M      PN+ A+   + ALC+   V +A +  + 
Sbjct: 116 ETFSIIMRKYARAQKVEEALYTFNVMEKYDCAPNLAAFNGLLSALCKSKNVRKAQEIFDK 175

Query: 305 MRYMKCPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSE 126
           M+  +  P++  Y +LI  +     +P+A EV+R+M   GC PD   Y  ++  LC    
Sbjct: 176 MKD-RFEPDSKTYSILIDGWGKDPNLPKAREVFREMTDAGCNPDIVTYGIMVDVLCKAGR 234

Query: 125 EGLAHQVLQMMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
              A ++++ M D G  P +  Y++++     +  I+DA D
Sbjct: 235 VDEAIEIVRGMDDSGCTPTSFIYSVLVHTYGVEHRIEDAVD 275


>ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 454

 Score =  218 bits (554), Expect = 6e-54
 Identities = 107/313 (34%), Positives = 176/313 (56%)
 Frame = -3

Query: 962 PNTDITKELEKSKIKVTPKQTVEILKRFEHSGIQGYRFFQWTQNQEGYENEVEAYHCVIT 783
           P   +   L ++ ++V+P     +LKRFE++G+  +RFF+W + Q GY + + AYH +I 
Sbjct: 20  PTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIE 79

Query: 782 CLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQMEKTLGFEA 603
            L ++R + + W +   M  K +L  + F I+MR YA+A K + A+  F+ M+K      
Sbjct: 80  SLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDK-YDVVP 138

Query: 602 GIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQNWRRFDA 423
            +  FN  L  LCKS+    A ++F+ M     QFVPD KSY+IL+E WGK  N  R   
Sbjct: 139 NLAAFNGLLSALCKSNNVRKAQEIFDAMKG---QFVPDEKSYSILLEGWGKAPNLPRARE 195

Query: 422 LFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMKCPPNAYAYGVLIHAYC 243
           +F +M+  G  P+V+ Y + +  LC+   V+EA + +++M    C P ++ Y VL+H Y 
Sbjct: 196 VFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYG 255

Query: 242 ARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNAR 63
              ++  A++ + +M   G   D   YN+LI   C V++    H+VL+ M   GV PN+R
Sbjct: 256 VEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSR 315

Query: 62  TYNIILLYLVQKG 24
           T N+I+  ++ +G
Sbjct: 316 TCNVIISSMIGQG 328



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 34/294 (11%)
 Frame = -3

Query: 803  AYHCVITCLGRLRNFDLAWQVFDEMSTKKILTKKPFFILMRWYAKAWKAESALEGFHQME 624
            A++ +++ L +  N   A ++FD M  + +  +K + IL+  + KA     A E F +M 
Sbjct: 142  AFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMV 201

Query: 623  KTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTILIEAWGKEQ 444
            +  G +  +  +   +  LCK+   + A +V ++M   + +  P +  Y++L+  +G E 
Sbjct: 202  EA-GCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCR--PTSFIYSVLVHTYGVEH 258

Query: 443  NWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDM------------- 303
                    F +M  KGI  +V+AY   + A C+VN  +     L++M             
Sbjct: 259  RIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCN 318

Query: 302  --------------------RYMK-CPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDG 186
                                R +K C P+A  Y ++I  +C + ++  A+++++ MK   
Sbjct: 319  VIISSMIGQGQTDRAFRVFCRMIKLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQ 378

Query: 185  CTPDAPIYNSLIKGLCAVSEEGLAHQVLQMMADEGVGPNARTYNIILLYLVQKG 24
              P    +++LIKGLC       A  V++ M ++G+ P+  T+  +   L+++G
Sbjct: 379  FVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEG 432



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 50/216 (23%), Positives = 102/216 (47%)
 Frame = -3

Query: 650 ALEGFHQMEKTLGFEAGIDDFNDFLLTLCKSDCTEFAHQVFEKMTAPDEQFVPDAKSYTI 471
           A   F   EK  G+   I  ++  + +L K    +    V++ ++A  ++ + + +++ I
Sbjct: 54  AFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQI---VWDLVSAMRKKGMLNVETFCI 110

Query: 470 LIEAWGKEQNWRRFDALFHDMLGKGIVPNVIAYVVYMHALCRVNCVEEAADTLEDMRYMK 291
           ++  + +          F+ M    +VPN+ A+   + ALC+ N V +A +  + M+  +
Sbjct: 111 MMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKG-Q 169

Query: 290 CPPNAYAYGVLIHAYCARRKVPRAMEVYRKMKLDGCTPDAPIYNSLIKGLCAVSEEGLAH 111
             P+  +Y +L+  +     +PRA EV+R+M   GC PD   Y  ++  LC       A 
Sbjct: 170 FVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAV 229

Query: 110 QVLQMMADEGVGPNARTYNIILLYLVQKGVIKDACD 3
           +V++ M      P +  Y++++     +  I+DA D
Sbjct: 230 EVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAID 265