BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00028041
         (737 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...   260   3e-67
gb|EOY30309.1| Replication protein A 1A [Theobroma cacao]             259   6e-67
ref|XP_006490819.1| PREDICTED: replication protein A 70 kDa DNA-...   258   1e-66
ref|XP_006451564.1| hypothetical protein CICLE_v10010492mg [Citr...   258   1e-66
ref|XP_006338140.1| PREDICTED: replication protein A 70 kDa DNA-...   256   4e-66
ref|XP_004513472.1| PREDICTED: replication protein A 70 kDa DNA-...   256   4e-66
ref|XP_004239312.1| PREDICTED: replication protein A 70 kDa DNA-...   256   4e-66
ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-...   256   5e-66
ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   256   5e-66
gb|ESW10670.1| hypothetical protein PHAVU_009G228500g [Phaseolus...   256   7e-66
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]                      255   1e-65
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...   254   2e-65
ref|NP_973433.1| replication factor A 1A [Arabidopsis thaliana] ...   254   3e-65
ref|NP_178690.1| replication factor A 1A [Arabidopsis thaliana] ...   254   3e-65
ref|XP_006408983.1| hypothetical protein EUTSA_v10001929mg [Eutr...   253   4e-65
ref|XP_006297186.1| hypothetical protein CARUB_v10013190mg [Caps...   253   4e-65
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...   253   4e-65
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...   253   4e-65
ref|XP_006854186.1| hypothetical protein AMTR_s00048p00204000 [A...   251   1e-64
ref|XP_002330505.1| predicted protein [Populus trichocarpa]           250   3e-64

>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score =  260 bits (665), Expect = 3e-67
 Identities = 130/245 (53%), Positives = 172/245 (70%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 223 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 282

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           VE+FYD I VG VYLIS G +    + +N LKNEWEI LE  STV L  + DN I KQ F
Sbjct: 283 VERFYDVIEVGRVYLISKGSLKPAQRNFNHLKNEWEIFLEATSTVDLCPDGDNSIPKQQF 342

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            F+ I +I+N++  S++D+IGIV  VNP+  I +K+G +  RRIL LKD S  +IE TLW
Sbjct: 343 TFKTISEIENVENNSILDVIGIVISVNPSVPILRKNGMETQRRILNLKDGSGRNIELTLW 402

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G+FCN EGQ+LQE++D    PV+AVKA +VSD+ G+S+ T   T++FI+ DI EA  LK 
Sbjct: 403 GDFCNKEGQQLQEIVDSGDFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAHGLKD 462

Query: 16  WHEGG 2
           W + G
Sbjct: 463 WFDRG 467


>gb|EOY30309.1| Replication protein A 1A [Theobroma cacao]
          Length = 628

 Score =  259 bits (662), Expect = 6e-67
 Identities = 128/245 (52%), Positives = 170/245 (69%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 177 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 236

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FYD I VG VYLIS G +    K +N LKNEWEI LE  STV L   +D  I +Q F
Sbjct: 237 VDRFYDVIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLESNSTVELCPNEDGSIPRQQF 296

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I +I + +  S++D+IGIV  VNP+  I +K+G +  RRIL LKD+S  S+E TLW
Sbjct: 297 SFRPISEIDSAENNSILDVIGIVITVNPSVPILRKNGMETQRRILNLKDASGKSVELTLW 356

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G+FCN EGQ+LQE++D    PV+AVKA +VSD+ G+S+ T   T++FI+ D  EAQ L+ 
Sbjct: 357 GDFCNKEGQKLQEMVDSGFFPVLAVKAGKVSDFNGKSIGTISSTQLFINPDCPEAQGLRD 416

Query: 16  WHEGG 2
           W E G
Sbjct: 417 WFEKG 421


>ref|XP_006490819.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           isoform X2 [Citrus sinensis]
          Length = 560

 Score =  258 bits (659), Expect = 1e-66
 Identities = 126/245 (51%), Positives = 173/245 (70%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 114 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 173

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FY+ I VG VYLIS G +    K +N LKNEWEI LE  STV L  E+D+ I KQ F
Sbjct: 174 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 233

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I +I++ +  S+VD+IGIV  VNP+  I +K+G +  RRIL LKD+S  S+E TLW
Sbjct: 234 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 293

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G+FCN EGQ+LQE++D    PV++VK+ +V+D+ G+S+ T   T++FI+ D  EA EL+ 
Sbjct: 294 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 353

Query: 16  WHEGG 2
           W + G
Sbjct: 354 WFDSG 358


>ref|XP_006451564.1| hypothetical protein CICLE_v10010492mg [Citrus clementina]
           gi|568875472|ref|XP_006490818.1| PREDICTED: replication
           protein A 70 kDa DNA-binding subunit A-like isoform X1
           [Citrus sinensis] gi|557554790|gb|ESR64804.1|
           hypothetical protein CICLE_v10010492mg [Citrus
           clementina]
          Length = 653

 Score =  258 bits (659), Expect = 1e-66
 Identities = 126/245 (51%), Positives = 173/245 (70%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FY+ I VG VYLIS G +    K +N LKNEWEI LE  STV L  E+D+ I KQ F
Sbjct: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 326

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I +I++ +  S+VD+IGIV  VNP+  I +K+G +  RRIL LKD+S  S+E TLW
Sbjct: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G+FCN EGQ+LQE++D    PV++VK+ +V+D+ G+S+ T   T++FI+ D  EA EL+ 
Sbjct: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446

Query: 16  WHEGG 2
           W + G
Sbjct: 447 WFDSG 451


>ref|XP_006338140.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Solanum tuberosum]
          Length = 653

 Score =  256 bits (655), Expect = 4e-66
 Identities = 127/245 (51%), Positives = 170/245 (69%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y N+ GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 193 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNSRGDGKVFSFDLLDSDGGEIRVTCFNAV 252

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FYDKI  G VY+IS G +    K +N LKNEWEI LE  STV L  ++D  I +Q F
Sbjct: 253 VDRFYDKIEAGKVYMISKGSLKPAQKNFNHLKNEWEIFLETTSTVDLCPDEDASIPRQQF 312

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I +I++ +  S++D+IGIV  VNP+  I +K+G +  RRIL LKD S  SIE TLW
Sbjct: 313 SFRPICEIESAENNSIIDVIGIVTAVNPSVPILRKNGMETQRRILNLKDQSGRSIELTLW 372

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G+FCN EGQ LQEL +    PV+AVKAA+VSD+ G+S+ T   T++FI+ D  EAQ L+ 
Sbjct: 373 GDFCNREGQNLQELAEAGFSPVLAVKAAKVSDFTGKSIGTISSTQLFINPDSAEAQTLRE 432

Query: 16  WHEGG 2
           W + G
Sbjct: 433 WFDQG 437


>ref|XP_004513472.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cicer arietinum]
          Length = 628

 Score =  256 bits (655), Expect = 4e-66
 Identities = 123/243 (50%), Positives = 174/243 (71%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           ++ PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 181 RVIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 240

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FY+ I VG VYLIS G +    K +N LKNEWEI+L+  STV L  ++D  I KQ F
Sbjct: 241 VDRFYECIEVGKVYLISKGSLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSIPKQQF 300

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I DI+N++  +++D+IG+V  VNP+  I +K+G + LRRIL LKDSS  SIE TLW
Sbjct: 301 SFRPISDIENVESNTILDVIGVVTSVNPSVPILRKNGMETLRRILNLKDSSGRSIELTLW 360

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           GEFCN EGQ+LQ+++D    P++AVKA +V+++ G+S+ +   T++FI+ D  EAQ L+ 
Sbjct: 361 GEFCNREGQKLQDMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQSLRV 420

Query: 16  WHE 8
           W +
Sbjct: 421 WFD 423


>ref|XP_004239312.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Solanum lycopersicum]
          Length = 636

 Score =  256 bits (655), Expect = 4e-66
 Identities = 126/245 (51%), Positives = 169/245 (68%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI ALNP+  RW IKARVT KG+   Y N+ GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 183 RIIPIVALNPYQGRWAIKARVTAKGDLRRYNNSRGDGKVFFFDLLDSDGGEIRVTCFNAV 242

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FYDKI  G VY+IS G +    K +N LKNEWEI LE  STV L  ++D  I +Q F
Sbjct: 243 VDRFYDKIEAGKVYMISKGSLKPAQKNFNHLKNEWEIFLETTSTVDLCPDEDASIPRQQF 302

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I +I++ +  S++D+IGIV  VNP+  I +K+G +  RRIL LKD S  S+E TLW
Sbjct: 303 SFRPICEIESAENNSIIDVIGIVTAVNPSVPILRKNGMETQRRILNLKDQSGRSVELTLW 362

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G+FCN EGQ LQEL +    P++AVKAA+VSD+ G+S+VT   T +FI+ D  EAQ L+ 
Sbjct: 363 GDFCNREGQNLQELAEAGVSPILAVKAAKVSDFIGKSIVTISSTHLFINPDSAEAQTLRE 422

Query: 16  WHEGG 2
           W + G
Sbjct: 423 WFDQG 427


>ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Glycine max]
          Length = 637

 Score =  256 bits (654), Expect = 5e-66
 Identities = 122/243 (50%), Positives = 170/243 (69%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 190 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 249

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FY+ I VG VY+IS G +    K +N LKNEWEI+LE  S V L  ++D  I +Q F
Sbjct: 250 VDRFYNVIEVGKVYMISKGSLKPAQKNFNHLKNEWEILLESSSMVELCPDEDGSIPRQQF 309

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I DI+N+D  S++D+IG+V  VNP+  I +K+G +  RRIL LKDSS  S+E TLW
Sbjct: 310 SFRPISDIENVDNNSILDVIGVVTSVNPSVPILRKNGMETQRRILSLKDSSGSSVELTLW 369

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           GEFCN EGQ+LQ+++D    P++AVK  +V+D+ G+S+ +   T++FI+ D  EA  L+ 
Sbjct: 370 GEFCNREGQQLQDMVDAGFFPILAVKTGKVNDFSGKSIGSISTTQLFINPDFPEAHSLRE 429

Query: 16  WHE 8
           W E
Sbjct: 430 WFE 432


>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  256 bits (654), Expect = 5e-66
 Identities = 125/245 (51%), Positives = 170/245 (69%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 177 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 236

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FYD I VG VYLIS G +    K +N LKNEWEI LE  S+V L  ++D  I KQ F
Sbjct: 237 VDRFYDTIEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLEASSSVELCPDEDGSIPKQQF 296

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I +I+N++  S++D+IGIV  VNP+  I +K+G +  RRI+ LKD S  SIE T+W
Sbjct: 297 SFRPISEIENVENNSILDVIGIVISVNPSVPILRKNGMETQRRIVNLKDGSGRSIELTMW 356

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           GEFCN EG +LQE++D    PV+AVK+ +V+D+ G+SV T   T++FI+ D  EA  L+ 
Sbjct: 357 GEFCNREGHQLQEMIDSGSFPVLAVKSGKVNDFSGKSVGTISATQLFINPDFTEACNLRE 416

Query: 16  WHEGG 2
           W + G
Sbjct: 417 WFDRG 421


>gb|ESW10670.1| hypothetical protein PHAVU_009G228500g [Phaseolus vulgaris]
          Length = 631

 Score =  256 bits (653), Expect = 7e-66
 Identities = 120/243 (49%), Positives = 171/243 (70%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW I+ARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 184 RIIPIAALNPYQGRWAIRARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 243

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FY  I VG VY+IS G +    K +N LKNEWE+ LE  STV L  ++D+ I +Q F
Sbjct: 244 VDRFYSVIEVGKVYMISKGSLKPAQKNFNHLKNEWEVFLESTSTVELCPDEDDSIPRQQF 303

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I DI+N+D  +++D+IG+V  VNP+  I +K+G +  RRIL LKDSS  S+E TLW
Sbjct: 304 SFRPISDIENVDNNAILDVIGVVTSVNPSVPILRKNGMETQRRILSLKDSSGRSVELTLW 363

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           GEFCN EGQ+LQE++D    P++AVKA +V+D+ G+S+ +   T++FI+ +  EA  L+ 
Sbjct: 364 GEFCNREGQQLQEMVDAGISPILAVKAGKVNDFSGKSIGSISTTQLFINPEFPEANSLRE 423

Query: 16  WHE 8
           W +
Sbjct: 424 WFD 426


>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
          Length = 637

 Score =  255 bits (651), Expect = 1e-65
 Identities = 121/240 (50%), Positives = 172/240 (71%)
 Frame = -2

Query: 727 PISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSAVEQ 548
           PI+ALNP+  RW I+ARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ V++
Sbjct: 193 PIAALNPYQGRWAIRARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAIVDR 252

Query: 547 FYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWFRFR 368
           FYD I VG VYLIS G +    K +N LKNEWEI+L+  STV L  ++D    KQ F FR
Sbjct: 253 FYDSIEVGKVYLISKGNLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSYPKQQFSFR 312

Query: 367 QIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLWGEF 188
            I DI+N++  +++D+IG+V  VNP+  I +K+G + LRRIL LKD+S  S+E TLWGEF
Sbjct: 313 PISDIENVESNAILDVIGVVTSVNPSVPILRKNGMETLRRILNLKDNSGRSVELTLWGEF 372

Query: 187 CNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKSWHE 8
           CN EGQ+LQE++D    P++AVKA +V+++ G+S+ +   T++FI+ D  EAQ L++W +
Sbjct: 373 CNREGQKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQSLRAWFD 432


>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score =  254 bits (650), Expect = 2e-65
 Identities = 120/245 (48%), Positives = 170/245 (69%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           ++ PI+ALNP+  RW IKARVT KG+   Y NA GDG+ + F+++DS G +I+V CFN+ 
Sbjct: 196 RVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVYSFDLLDSDGGEIRVTCFNAV 255

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
            ++FYD   VG VYLIS G +    K YN LKNEWEI LE  STV L  ++D  I +Q F
Sbjct: 256 ADRFYDVTEVGKVYLISKGSLKPAQKNYNHLKNEWEIFLESTSTVELCPDEDGSIPRQQF 315

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I DI+N +  +++D+IG+V  VNP+  I +K+G +  RRIL LKD S  ++E TLW
Sbjct: 316 SFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLW 375

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           GEFCN +G++L+E++D    PV+A+KA +VSD+ G+SV T   T++FI+ D  EA +L++
Sbjct: 376 GEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRT 435

Query: 16  WHEGG 2
           W + G
Sbjct: 436 WFDHG 440


>ref|NP_973433.1| replication factor A 1A [Arabidopsis thaliana]
           gi|330250915|gb|AEC06009.1| replication factor A 1A
           [Arabidopsis thaliana]
          Length = 617

 Score =  254 bits (648), Expect = 3e-65
 Identities = 121/245 (49%), Positives = 170/245 (69%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           ++ PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++D  G +I+V CFN+ 
Sbjct: 173 RVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNAL 232

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FYD   VG VYLIS G +    K +N LKNEWEI LE  STV L  ++D  I KQ F
Sbjct: 233 VDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQF 292

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I DI+N +  +++D+IG+V  VNP+  I +K+G +  RRIL LKD S  ++E TLW
Sbjct: 293 SFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLW 352

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           GEFCN +G++L+E++D    PV+A+KA +VSD+ G+SV T   T++FI+ D  EA +L++
Sbjct: 353 GEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRT 412

Query: 16  WHEGG 2
           W + G
Sbjct: 413 WFDYG 417


>ref|NP_178690.1| replication factor A 1A [Arabidopsis thaliana]
           gi|75337354|sp|Q9SKI4.1|RFA1A_ARATH RecName:
           Full=Replication protein A 70 kDa DNA-binding subunit A;
           Short=AtRPA70A; AltName: Full=AtRPA1-3; AltName:
           Full=Replication factor A protein 1A; AltName:
           Full=Replication protein A 1A; Short=AtRPA1A
           gi|4584356|gb|AAD25150.1| putative replication protein
           A1 [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
           putative replication protein A1 [Arabidopsis thaliana]
           gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
           thaliana] gi|330250916|gb|AEC06010.1| replication factor
           A 1A [Arabidopsis thaliana]
          Length = 640

 Score =  254 bits (648), Expect = 3e-65
 Identities = 121/245 (49%), Positives = 170/245 (69%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           ++ PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++D  G +I+V CFN+ 
Sbjct: 196 RVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNAL 255

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FYD   VG VYLIS G +    K +N LKNEWEI LE  STV L  ++D  I KQ F
Sbjct: 256 VDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQF 315

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I DI+N +  +++D+IG+V  VNP+  I +K+G +  RRIL LKD S  ++E TLW
Sbjct: 316 SFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLW 375

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           GEFCN +G++L+E++D    PV+A+KA +VSD+ G+SV T   T++FI+ D  EA +L++
Sbjct: 376 GEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRT 435

Query: 16  WHEGG 2
           W + G
Sbjct: 436 WFDYG 440


>ref|XP_006408983.1| hypothetical protein EUTSA_v10001929mg [Eutrema salsugineum]
           gi|557110139|gb|ESQ50436.1| hypothetical protein
           EUTSA_v10001929mg [Eutrema salsugineum]
          Length = 642

 Score =  253 bits (647), Expect = 4e-65
 Identities = 123/245 (50%), Positives = 170/245 (69%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I++ CFN  
Sbjct: 196 RIIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDSDGGEIRITCFNVV 255

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FYD I VG VYLIS G +    K +N LKNEWEI LE  STV L  ++D  I +Q F
Sbjct: 256 VDRFYDVIDVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPRQQF 315

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I DI+N +  +++DIIG+V  VNP+  I +K+G +  RRIL LKD S  ++E TLW
Sbjct: 316 SFRPISDIENAENNTILDIIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLW 375

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           GEFCN +G++L+EL++    PV+A+KA +VSD+ G+SV T   T++FI+ D  EA  L++
Sbjct: 376 GEFCNRDGRQLEELVESAFFPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHILRN 435

Query: 16  WHEGG 2
           W + G
Sbjct: 436 WFDHG 440


>ref|XP_006297186.1| hypothetical protein CARUB_v10013190mg [Capsella rubella]
           gi|482565895|gb|EOA30084.1| hypothetical protein
           CARUB_v10013190mg [Capsella rubella]
          Length = 640

 Score =  253 bits (647), Expect = 4e-65
 Identities = 119/245 (48%), Positives = 170/245 (69%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           ++ PI+ALNP+  RW IKAR+T KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 196 RVIPIAALNPYQGRWAIKARITAKGDIRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAV 255

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FYD   VG VYLIS G +    K +N LKNEWEI LE  STV L  ++D  I +Q F
Sbjct: 256 VDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESASTVELCPDEDGSIPRQQF 315

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I DI+N +  +++D+IG+V  VNP+  I +K+G +  RRIL LKD S  ++E TLW
Sbjct: 316 SFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLW 375

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           GEFCN +G+ L+E+++    PV+A+KA +VSD+ G+SV T   T++FI+ D  EA +L++
Sbjct: 376 GEFCNRDGRELEEMVNSASHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRN 435

Query: 16  WHEGG 2
           W + G
Sbjct: 436 WFDRG 440


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score =  253 bits (647), Expect = 4e-65
 Identities = 118/245 (48%), Positives = 174/245 (71%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 177 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAV 236

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FY+ I VG VYLIS G +    K +N LKNEWE+ LE  STV L  ++D+ I +Q F
Sbjct: 237 VDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQF 296

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            F+ I +I+N +  S++D+IGIV  +NP+  + +K+G +  RR++ LKD+S  S+E T+W
Sbjct: 297 SFKPISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMW 356

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G+FCN EGQ+LQE++     PV+AVK+ +VSD+ G+S+ T   T++FI+ D+ EA  L+ 
Sbjct: 357 GDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILRE 416

Query: 16  WHEGG 2
           W++GG
Sbjct: 417 WYDGG 421


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score =  253 bits (647), Expect = 4e-65
 Identities = 118/245 (48%), Positives = 174/245 (71%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 177 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAV 236

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FY+ I VG VYLIS G +    K +N LKNEWE+ LE  STV L  ++D+ I +Q F
Sbjct: 237 VDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASSTVELCPDEDDTIPRQQF 296

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            F+ I +I+N +  S++D+IGIV  +NP+  + +K+G +  RR++ LKD+S  S+E T+W
Sbjct: 297 SFKPISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELTMW 356

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G+FCN EGQ+LQE++     PV+AVK+ +VSD+ G+S+ T   T++FI+ D+ EA  L+ 
Sbjct: 357 GDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHILRE 416

Query: 16  WHEGG 2
           W++GG
Sbjct: 417 WYDGG 421


>ref|XP_006854186.1| hypothetical protein AMTR_s00048p00204000 [Amborella trichopoda]
           gi|548857855|gb|ERN15653.1| hypothetical protein
           AMTR_s00048p00204000 [Amborella trichopoda]
          Length = 798

 Score =  251 bits (642), Expect = 1e-64
 Identities = 116/243 (47%), Positives = 167/243 (68%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKARVT KG+   Y N  G+G+ F F+++DS G +I++ CFN+ 
Sbjct: 155 RIIPIAALNPYQGRWTIKARVTAKGDLRRYNNPRGEGKVFSFDLLDSEGGEIRITCFNAV 214

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
            +QFYD++ VG VYL+S G +    + +N L NEWEI LE  ST+    E+D  I +Q F
Sbjct: 215 ADQFYDRLEVGKVYLVSKGSLKPAQRNFNHLNNEWEIFLESTSTIEPCMEEDPSIPRQQF 274

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            FR I++I++++  S+VD+IGIV  +NP+  I +K+GT+  +R L LKD S   +E TLW
Sbjct: 275 NFRPINEIEHMESNSMVDLIGIVSSINPSATIMRKNGTETQKRTLQLKDMSGRGVEVTLW 334

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G FCNNEGQ LQ++ D    PV+AVKA RV+D+ G+SV T   +++FI+ D  EAQ+L+ 
Sbjct: 335 GNFCNNEGQHLQDMCDSGVFPVLAVKAGRVNDFSGKSVGTISTSQLFINPDFPEAQQLRE 394

Query: 16  WHE 8
           W +
Sbjct: 395 WFD 397


>ref|XP_002330505.1| predicted protein [Populus trichocarpa]
          Length = 502

 Score =  250 bits (639), Expect = 3e-64
 Identities = 121/245 (49%), Positives = 168/245 (68%)
 Frame = -2

Query: 736 KITPISALNPHHRRWIIKARVTLKGECHPYFNANGDGEYFVFEVVDSRGSQIQVKCFNSA 557
           +I PI+ALNP+  RW IKAR+T KG+   Y NA GDG+ F F+++DS G +I+V CFN+ 
Sbjct: 115 RIIPINALNPYQGRWAIKARITAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 174

Query: 556 VEQFYDKIHVGNVYLISNGKVSHPPKRYNPLKNEWEIILEDYSTVRLYAEDDNPISKQWF 377
           V++FYD + VG VYLIS G +    K +N LKN+WEI LE  STV L  E+D  I +Q F
Sbjct: 175 VDRFYDVVEVGKVYLISKGSLKPAQKNFNHLKNDWEIFLEATSTVDLCPEEDGSIPQQQF 234

Query: 376 RFRQIHDIKNLDKGSLVDIIGIVCRVNPTRNIRKKDGTQALRRILMLKDSSSCSIEFTLW 197
            F+ I +I+  +  S+ D+IG+V  VNP+  I +K+G +  RRIL LKD S  ++E TLW
Sbjct: 235 SFKPISEIEIAENNSIFDVIGVVISVNPSVPILRKNGMETQRRILNLKDGSGWTVELTLW 294

Query: 196 GEFCNNEGQRLQELLDDCCDPVVAVKAARVSDYGGRSVVTGFRTEIFIDTDIVEAQELKS 17
           G+FCN EGQ+LQE++D    P++AVKA +VSD+ G+S+ T   T++FI+ DI EA   K 
Sbjct: 295 GDFCNKEGQKLQEMVDSGFFPILAVKAGKVSDFNGKSLGTISSTQLFINPDIPEAHAAKD 354

Query: 16  WHEGG 2
           W + G
Sbjct: 355 WFDRG 359