BLASTX nr result
ID: Ephedra27_contig00028026
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00028026
(367 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006283244.1| hypothetical protein CARUB_v10004277mg [Caps... 62 1e-07
ref|XP_004246925.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_004306236.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_006403701.1| hypothetical protein EUTSA_v10010938mg [Eutr... 60 2e-07
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr... 60 2e-07
ref|XP_001754449.1| predicted protein [Physcomitrella patens] gi... 60 2e-07
ref|NP_195434.1| pentatricopeptide repeat-containing protein [Ar... 60 3e-07
ref|XP_002869013.1| pentatricopeptide repeat-containing protein ... 60 4e-07
emb|CBI37903.3| unnamed protein product [Vitis vinifera] 59 5e-07
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
gb|EOX97730.1| Pentatricopeptide repeat (PPR-like) superfamily p... 59 9e-07
ref|XP_006428842.1| hypothetical protein CICLE_v10013697mg, part... 58 1e-06
ref|XP_006411944.1| hypothetical protein EUTSA_v10026762mg [Eutr... 58 1e-06
gb|EMT23253.1| hypothetical protein F775_05915 [Aegilops tauschii] 58 1e-06
ref|XP_004231259.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_006847845.1| hypothetical protein AMTR_s00029p00062590 [A... 57 2e-06
ref|XP_002527345.1| pentatricopeptide repeat-containing protein,... 57 2e-06
ref|XP_006577708.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Caps... 57 3e-06
>ref|XP_006283244.1| hypothetical protein CARUB_v10004277mg [Capsella rubella]
gi|482551949|gb|EOA16142.1| hypothetical protein
CARUB_v10004277mg [Capsella rubella]
Length = 690
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Frame = -3
Query: 215 LLGEATDL-----EHAFSTVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLS 51
LLGEA + + ST +L+Q C+ T++L EGK +H HI SG+ ++ LL
Sbjct: 68 LLGEAVQILCRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLG 127
Query: 50 MYSKCGAAWDARQVFD 3
MY+KCG+ DAR+VFD
Sbjct: 128 MYAKCGSLVDARKVFD 143
>ref|XP_004246925.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum lycopersicum]
Length = 751
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/109 (33%), Positives = 59/109 (54%)
Frame = -3
Query: 329 ACIINKV*KPSKPHLVHFLMQSLARRGRQWEEPMTSILLLGEATDLEHAFSTVKDLLQDC 150
+C N+ + S H++ Q L +++ + S LL T ST L+ C
Sbjct: 18 SCFRNE--QSSNDHIILLCKQKL------FKQALESFELLERNTTYNLYPSTYAQLVSAC 69
Query: 149 AATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMYSKCGAAWDARQVFD 3
++ +SL + +HTHI+ S YQ + F ++LL+MY KCG+ +AR+VFD
Sbjct: 70 SSLRSLPYARRVHTHILASNYQPDMIFQNHLLNMYGKCGSLKEARKVFD 118
>ref|XP_004306236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 757
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = -3
Query: 254 RGRQWEEPMTSILLLGEATDLEHAFSTVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEET 75
R + + E + + L + T + ST +L+ C+ +S+ G+ IH HI+ S +++
Sbjct: 41 RQKHYREALQAFDFLDKNTSFKVFPSTYANLVSACSFLRSIEHGRKIHDHILGSNCEQDI 100
Query: 74 SFYSNLLSMYSKCGAAWDARQVFD 3
+++L+MY KCG+ WDAR+VFD
Sbjct: 101 VLQNHILNMYGKCGSFWDARKVFD 124
>ref|XP_006403701.1| hypothetical protein EUTSA_v10010938mg [Eutrema salsugineum]
gi|557104820|gb|ESQ45154.1| hypothetical protein
EUTSA_v10010938mg [Eutrema salsugineum]
Length = 768
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = -3
Query: 185 AFSTVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMYSKCGAAWDARQVF 6
+ T L+ C++++SL +G+ IH HI+KS + +T +++LSMY KCG+ DARQVF
Sbjct: 66 SLKTYVSLICACSSSRSLAQGRKIHDHILKSNCKHDTILNNHILSMYGKCGSLRDARQVF 125
Query: 5 D 3
D
Sbjct: 126 D 126
>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = -3
Query: 170 KDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMYSKCGAAWDARQVFD 3
+ LLQ+CA +SL +G+ +H I+KSG Q + LLSMY+KCG+ DAR+VFD
Sbjct: 100 RGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFD 155
>ref|XP_001754449.1| predicted protein [Physcomitrella patens]
gi|162694551|gb|EDQ80899.1| predicted protein
[Physcomitrella patens]
Length = 723
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = -3
Query: 170 KDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMYSKCGAAWDARQVFD 3
+ LLQ+CA +SL +G+ +H I+KSG Q + LLSMY+KCG+ DAR+VFD
Sbjct: 51 RGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFD 106
>ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g37170 gi|2464864|emb|CAB16758.1| putative protein
[Arabidopsis thaliana] gi|7270666|emb|CAB80383.1|
putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = -3
Query: 224 SILLLGEATDLEHAFSTVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMY 45
++ LLG A + ST +L+Q C+ T++L EGK +H HI SG+ ++ LL MY
Sbjct: 73 AVQLLGRAK--KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMY 130
Query: 44 SKCGAAWDARQVFD 3
+KCG+ DAR+VFD
Sbjct: 131 AKCGSLVDARKVFD 144
>ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297314849|gb|EFH45272.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 693
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/74 (41%), Positives = 47/74 (63%)
Frame = -3
Query: 224 SILLLGEATDLEHAFSTVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMY 45
++ LLG A + ST +L+Q C+ T++L EGK +H HI SG+ ++ +L MY
Sbjct: 75 AVQLLGRAK--KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMY 132
Query: 44 SKCGAAWDARQVFD 3
+KCG+ DAR+VFD
Sbjct: 133 AKCGSLVDARKVFD 146
>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Frame = -3
Query: 347 KKQETRACIINKV*KPSKPHLVHFLMQSL---ARRGRQWEEPMTSILLLGEATDLEHAFS 177
+K R C++ + K K + ++ + SL ARRG + +
Sbjct: 19 RKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARRGLRLDS------------------R 60
Query: 176 TVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSN-LLSMYSKCGAAWDARQVFD 3
T+ LLQ CA +++L EGK +H H+ +G + +F SN L++MY+KCG +AR+VFD
Sbjct: 61 TLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFD 119
>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Frame = -3
Query: 347 KKQETRACIINKV*KPSKPHLVHFLMQSL---ARRGRQWEEPMTSILLLGEATDLEHAFS 177
+K R C++ + K K + ++ + SL ARRG + +
Sbjct: 19 RKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARRGLRLDS------------------R 60
Query: 176 TVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSN-LLSMYSKCGAAWDARQVFD 3
T+ LLQ CA +++L EGK +H H+ +G + +F SN L++MY+KCG +AR+VFD
Sbjct: 61 TLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFD 119
>gb|EOX97730.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 610
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 176 TVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSN-LLSMYSKCGAAWDARQVFD 3
T+ LLQ CA T+SL EGK +H H+ +G + +F SN L++MYS CG AR+VFD
Sbjct: 57 TLASLLQQCAKTKSLKEGKFLHLHLKLTGLKSPNTFLSNHLINMYSNCGDYIGARRVFD 115
>ref|XP_006428842.1| hypothetical protein CICLE_v10013697mg, partial [Citrus clementina]
gi|557530899|gb|ESR42082.1| hypothetical protein
CICLE_v10013697mg, partial [Citrus clementina]
Length = 637
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = -3
Query: 242 WEEPMTSILLLGEATDLEHAFSTVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYS 63
+ E + + L T+ ST DL+ C++ +SL G+ +H HI+ S Q + ++
Sbjct: 4 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 63
Query: 62 NLLSMYSKCGAAWDARQVFD 3
++L+MY KCG+ DAR VFD
Sbjct: 64 HILNMYGKCGSLEDARMVFD 83
>ref|XP_006411944.1| hypothetical protein EUTSA_v10026762mg [Eutrema salsugineum]
gi|557113114|gb|ESQ53397.1| hypothetical protein
EUTSA_v10026762mg [Eutrema salsugineum]
Length = 694
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Frame = -3
Query: 215 LLGEATDL-----EHAFSTVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLS 51
LLGEA L + ST +L+Q C+ ++L EGK +H HI SG+ + LL
Sbjct: 72 LLGEAVHLLGRAKKPPASTYCNLIQVCSQKRALEEGKKVHEHIKNSGFVPGVVICNRLLG 131
Query: 50 MYSKCGAAWDARQVFD 3
MY+KCG+ DAR++FD
Sbjct: 132 MYAKCGSLIDARKLFD 147
>gb|EMT23253.1| hypothetical protein F775_05915 [Aegilops tauschii]
Length = 647
Score = 57.8 bits (138), Expect = 1e-06
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = -3
Query: 152 CAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMYSKCGAAWDARQVFD 3
CAA + + EG+ +H+H +K G+ ++ + L+ MYS CG WDAR+VFD
Sbjct: 113 CAARRDVNEGRQVHSHAIKHGFGDDLYLRNGLMHMYSVCGCLWDARRVFD 162
>ref|XP_004231259.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Solanum lycopersicum]
Length = 602
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -3
Query: 176 TVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSN-LLSMYSKCGAAWDARQVFD 3
T+ ++Q CA ++S EGK IH H+ +G++ T+F +N L++MYSKCG +AR+VFD
Sbjct: 58 TLAFIIQQCANSRSREEGKWIHLHLKTTGWKHPTTFLANHLINMYSKCGDHMEARKVFD 116
>ref|XP_006847845.1| hypothetical protein AMTR_s00029p00062590 [Amborella trichopoda]
gi|548851150|gb|ERN09426.1| hypothetical protein
AMTR_s00029p00062590 [Amborella trichopoda]
Length = 625
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = -3
Query: 188 HAFSTVKDLLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMYSKCGAAWDARQV 9
HA +T LLQ C T+SL G+++H + +G+Q+ T +NL++MY+ CG DA+ V
Sbjct: 42 HAPATYASLLQACTKTKSLCTGRVLHALLFFNGHQQNTPLQTNLINMYATCGNLLDAQLV 101
Query: 8 FD 3
FD
Sbjct: 102 FD 103
>ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533264|gb|EEF35017.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 687
Score = 57.4 bits (137), Expect = 2e-06
Identities = 22/54 (40%), Positives = 41/54 (75%)
Frame = -3
Query: 164 LLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMYSKCGAAWDARQVFD 3
LLQ+C S++E ++IH HI+K+G ++ + ++L+++Y+KCGA +AR++FD
Sbjct: 80 LLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFD 133
>ref|XP_006577708.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like, partial [Glycine max]
Length = 799
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/88 (32%), Positives = 50/88 (56%)
Frame = -3
Query: 266 SLARRGRQWEEPMTSILLLGEATDLEHAFSTVKDLLQDCAATQSLTEGKLIHTHIVKSGY 87
+L + R + E + + + + ++ ST +L+ C + +SL GK IH HI+KS
Sbjct: 73 NLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNC 132
Query: 86 QEETSFYSNLLSMYSKCGAAWDARQVFD 3
Q + +++L+MY KCG+ DAR+ FD
Sbjct: 133 QPDLVLQNHILNMYGKCGSLKDARKAFD 160
>ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like isoform X1 [Citrus sinensis]
Length = 605
Score = 57.0 bits (136), Expect = 3e-06
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = -3
Query: 320 INKV*KPSKPHLVHFLMQSLARRGRQWEEPMTSILLLGEATDLEHAFSTVKDLLQDCAAT 141
IN+ P+ + FL SL +G Q E ++S+ LL + + T+ +LQ CA +
Sbjct: 10 INRKNLPNNCLIQSFL--SLISKG-QLSEAISSLDLLAQR-GIRLPAETLAFILQQCAES 65
Query: 140 QSLTEGKLIHTHIVKSGYQEETSFYSN-LLSMYSKCGAAWDARQVFD 3
+SL GK +H H+ + + T+F SN L+SMY KCG+ DAR+VFD
Sbjct: 66 KSLKLGKRVHLHLKLTQRKTPTTFLSNHLISMYFKCGSDVDARKVFD 112
>ref|XP_006296670.1| hypothetical protein CARUB_v10016279mg [Capsella rubella]
gi|482565379|gb|EOA29568.1| hypothetical protein
CARUB_v10016279mg [Capsella rubella]
Length = 717
Score = 56.6 bits (135), Expect = 3e-06
Identities = 21/54 (38%), Positives = 39/54 (72%)
Frame = -3
Query: 164 LLQDCAATQSLTEGKLIHTHIVKSGYQEETSFYSNLLSMYSKCGAAWDARQVFD 3
LL+ C +T+G+++H H+++S ++ + Y+ LL+MY+KCG+ +AR+VFD
Sbjct: 75 LLKKCTVFNLITQGRIVHAHLIQSIFRHDLVMYNTLLNMYAKCGSLEEARKVFD 128