BLASTX nr result

ID: Ephedra27_contig00027984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00027984
         (512 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006841410.1| hypothetical protein AMTR_s00003p00022210 [A...    70   4e-10
ref|XP_002527040.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216...    66   4e-09
ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo...    64   2e-08

>ref|XP_006841410.1| hypothetical protein AMTR_s00003p00022210 [Amborella trichopoda]
            gi|548843431|gb|ERN03085.1| hypothetical protein
            AMTR_s00003p00022210 [Amborella trichopoda]
          Length = 1309

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
 Frame = -1

Query: 452  SAMVRNVFIAYREFLVASNGGL-----SGFQNVSDNKSKIPGSGIIVGCAVEDESGLNGE 288
            S++V + F AYR FL      L     +    +  N +++P +   V     D+  L   
Sbjct: 1018 SSLVESAFDAYRNFLETYCNKLLLRKLTITYPLLANPNRLPCNARRV-----DDPALTRS 1072

Query: 287  LYHIFLDHLRTCCLWSIPKSYELFSSIFHYLPDFSVGKKSVIELLVNFLVPAEVFKFENR 108
            L    L  L+ C  W     + +F +IF +L D S  KK ++ LL+     AE+   E  
Sbjct: 1073 L----LSDLKCCFGWKKRNPHIMFENIFSHLADLSTCKKPIVRLLLGISDHAELLNMEFE 1128

Query: 107  LMLQKISVFGEDPKILCGLVKVSLNWDYIEQQLFW 3
            + L++ SVFG++ +++C LVK SL W++ EQQ  W
Sbjct: 1129 IGLKRFSVFGDNIEMICHLVKDSLYWEFSEQQKLW 1163


>ref|XP_002527040.1| conserved hypothetical protein [Ricinus communis]
           gi|223533602|gb|EEF35340.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 982

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/84 (40%), Positives = 51/84 (60%)
 Frame = -1

Query: 254 CCLWSIPKSYELFSSIFHYLPDFSVGKKSVIELLVNFLVPAEVFKFENRLMLQKISVFGE 75
           C  W   K+  LF SIF +  D  VG K +I LL+  L  A++ + +  + L+KIS+FGE
Sbjct: 727 CLQWERAKAKFLFCSIFQHFADLCVGDKKIIRLLIGLLDHADLVEVQFVIGLKKISLFGE 786

Query: 74  DPKILCGLVKVSLNWDYIEQQLFW 3
           + + +  L+K SL+WD +EQ  FW
Sbjct: 787 NCETIFLLIKNSLSWDPLEQHRFW 810


>ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216642 [Cucumis sativus]
          Length = 1058

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 46/156 (29%), Positives = 69/156 (44%)
 Frame = -1

Query: 470  IGMEELSAMVRNVFIAYREFLVASNGGLSGFQNVSDNKSKIPGSGIIVGCAVEDESGLNG 291
            I  EE++ +V N F AYR FL      L    +VS  K                      
Sbjct: 718  INKEEIAKLVTNAFSAYRCFLAYLKDILHKDADVSLTK---------------------- 755

Query: 290  ELYHIFLDHLRTCCLWSIPKSYELFSSIFHYLPDFSVGKKSVIELLVNFLVPAEVFKFEN 111
                +F   L +C  W+  +   LF  IF  L D  + K+ +++LLV  L   ++   + 
Sbjct: 756  ----VFYRDLMSCVEWNARRVKFLFHCIFDLLSDLCLCKEEIVKLLVTLLDDTDLVNMQF 811

Query: 110  RLMLQKISVFGEDPKILCGLVKVSLNWDYIEQQLFW 3
             ++ +K  VFG+D K +  LVK SLNW  +EQ+  W
Sbjct: 812  EIIAKKFCVFGKDIKSIFLLVKSSLNWGCLEQRKLW 847


>ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera]
          Length = 928

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 44/157 (28%), Positives = 70/157 (44%)
 Frame = -1

Query: 473  KIGMEELSAMVRNVFIAYREFLVASNGGLSGFQNVSDNKSKIPGSGIIVGCAVEDESGLN 294
            K+  + ++ +V   F AYR FL+ S  GL    +++                        
Sbjct: 648  KMDHQLVAKLVDGAFSAYRCFLMYSRNGLHKEADMT------------------------ 683

Query: 293  GELYHIFLDHLRTCCLWSIPKSYELFSSIFHYLPDFSVGKKSVIELLVNFLVPAEVFKFE 114
              L  +    L +C  W        F SIF +L D S G++ +I+LLV  L  A +   +
Sbjct: 684  --LARLLFSDLVSCSKWEKKMLRFSFCSIFCHLSDLSTGEEDIIKLLVALLDHANIVFMQ 741

Query: 113  NRLMLQKISVFGEDPKILCGLVKVSLNWDYIEQQLFW 3
              + L+K S+FGE+ + +  L+K SLNW + EQ   W
Sbjct: 742  FEIALKKFSIFGENTETIFYLIKNSLNWGFEEQHKVW 778


Top