BLASTX nr result
ID: Ephedra27_contig00027725
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00027725
(507 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citr... 74 2e-11
gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily p... 74 2e-11
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11
ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Popu... 73 4e-11
gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis] 72 1e-10
ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus pe... 72 1e-10
ref|XP_004969633.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
tpg|DAA58005.1| TPA: hypothetical protein ZEAMMB73_979671 [Zea m... 71 1e-10
ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [S... 71 1e-10
ref|XP_006664261.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_006663139.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutr... 71 2e-10
ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Caps... 71 2e-10
ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thalian... 71 2e-10
ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi... 71 2e-10
emb|CBI32614.3| unnamed protein product [Vitis vinifera] 71 2e-10
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
>ref|XP_006428878.1| hypothetical protein CICLE_v10011148mg [Citrus clementina]
gi|568853953|ref|XP_006480600.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Citrus sinensis]
gi|557530935|gb|ESR42118.1| hypothetical protein
CICLE_v10011148mg [Citrus clementina]
Length = 740
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME++ P NK KY+K++ + HS ++TSKH S RQ+ R ++KRAAEAFK W+GLPN Y+
Sbjct: 662 MEEHGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYY 720
>gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 758
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY+K++ + HS ++TSKH S RQ+ R+++KRAAEAFK W+GLPN Y+
Sbjct: 689 MEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRIERKRAAEAFKFWLGLPNSYY 747
>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
gi|449483612|ref|XP_004156638.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
Length = 736
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY +++ + HS ++TSKH S RQ+ R++KKRAAEAFK W+GLPN Y+
Sbjct: 665 MEENGIPPNKTKYSRIYVEMHSRMFTSKHASKARQDRRIEKKRAAEAFKFWLGLPNSYY 723
>ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Populus trichocarpa]
gi|550321129|gb|EEF04616.2| hypothetical protein
POPTR_0016s08650g [Populus trichocarpa]
Length = 724
Score = 72.8 bits (177), Expect = 4e-11
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY+K++ + HS ++TSKH S RQ+ R ++KRAAEAFK W+GLPN Y+
Sbjct: 653 MEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYY 711
>gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]
Length = 749
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY +++ + HS ++TSKH S RQ+ R +KKRAAEAFK W+GLPN Y+
Sbjct: 672 MEENGIPPNKTKYTRIYVEMHSRMFTSKHASQARQDRRREKKRAAEAFKFWLGLPNSYY 730
>ref|XP_004497462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 732
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY +++ + HS ++TSKH S RQ+ R+++KRAAEAFK W+GLPN Y+
Sbjct: 657 MEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQDRRVERKRAAEAFKFWLGLPNSYY 715
>ref|XP_004497461.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 732
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY +++ + HS ++TSKH S RQ+ R+++KRAAEAFK W+GLPN Y+
Sbjct: 657 MEENGIPPNKTKYTRIYVEMHSRMFTSKHASKARQDRRVERKRAAEAFKFWLGLPNSYY 715
>gb|EMJ07627.1| hypothetical protein PRUPE_ppa001926mg [Prunus persica]
Length = 740
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK K+ K++ + HS ++TSKH S RQ+ R+++KRAAEAFK W+GLPN Y+
Sbjct: 669 MEENGIPPNKTKFTKIYVEMHSRMFTSKHASQARQDRRIERKRAAEAFKFWLGLPNSYY 727
>ref|XP_004969633.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Setaria italica]
Length = 734
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ NK +YRKM+ + HS ++TSKH S RQ+ R ++KRAAEAFK W+GLPN Y+
Sbjct: 659 MEEKGIAPNKTRYRKMYIEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYY 717
>tpg|DAA58005.1| TPA: hypothetical protein ZEAMMB73_979671 [Zea mays]
Length = 730
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ NK KY+KM+ + HS ++TSKH S RQ+ R ++KRAAEAFK W+GLPN Y+
Sbjct: 656 MEEKGIAPNKTKYKKMYIEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYY 714
>ref|XP_002456190.1| hypothetical protein SORBIDRAFT_03g031900 [Sorghum bicolor]
gi|241928165|gb|EES01310.1| hypothetical protein
SORBIDRAFT_03g031900 [Sorghum bicolor]
Length = 731
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ NK KY+KM+ + HS ++TSKH S RQ+ R ++KRAAEAFK W+GLPN Y+
Sbjct: 657 MEEKGIAPNKTKYKKMYIEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYY 715
>ref|XP_006664261.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Oryza brachyantha]
Length = 553
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ NK KY++M+ + HS ++TSKH S RQ+ R ++KRAAEAFK W+GLPN Y+
Sbjct: 485 MEEMGLEANKGKYKRMYVELHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYY 543
>ref|XP_006663139.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like, partial [Oryza brachyantha]
Length = 507
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ NK KY++M+ + HS ++TSKH S RQ+ R ++KRAAEAFK W+GLPN Y+
Sbjct: 438 MEEMGLEANKGKYKRMYVELHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYY 496
>ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutrema salsugineum]
gi|557108800|gb|ESQ49107.1| hypothetical protein
EUTSA_v10020113mg [Eutrema salsugineum]
Length = 777
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY+K++ + HS ++TSKH S R R+++KRAAEAFK W+GLPN Y+
Sbjct: 708 MEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARVERRVERKRAAEAFKFWLGLPNSYY 766
>ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Capsella rubella]
gi|482565467|gb|EOA29656.1| hypothetical protein
CARUB_v10015405mg [Capsella rubella]
Length = 781
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY+K++ + HS ++TSKH S R + R+++KRAAEAFK W+GLPN Y+
Sbjct: 712 MEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGLPNSYY 770
>ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thaliana]
gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g09650, chloroplastic; AltName: Full=Protein HIGH
CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical
protein [Arabidopsis thaliana]
gi|332641272|gb|AEE74793.1| RNA binding protein HCF152
[Arabidopsis thaliana]
Length = 778
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY+K++ + HS ++TSKH S R + R+++KRAAEAFK W+GLPN Y+
Sbjct: 709 MEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGLPNSYY 767
>ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/60 (50%), Positives = 45/60 (75%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYHE 324
ME+ P NK K+ +++ + HS ++TSKH S RQ+ R+++KRAAEAFK W+GLPN Y++
Sbjct: 638 MEENGIPPNKTKFTRIYVEMHSRMFTSKHASRARQDRRVERKRAAEAFKFWLGLPNSYYD 697
>ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
gi|297328472|gb|EFH58891.1| HCF152 [Arabidopsis lyrata
subsp. lyrata]
Length = 772
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY+K++ + HS ++TSKH S R + R+++KRAAEAFK W+GLPN Y+
Sbjct: 703 MEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGLPNSYY 761
>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY +++ + HS ++TSKH S RQ+ R ++KRAAEAFK W+GLPN Y+
Sbjct: 635 MEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQDRRSERKRAAEAFKFWLGLPNSYY 693
>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Vitis vinifera]
Length = 749
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = -2
Query: 503 MEDYKFPVNKEKYRKMFRKYHSGIYTSKHKSLVRQNARLDKKRAAEAFKLWVGLPNVYH 327
ME+ P NK KY +++ + HS ++TSKH S RQ+ R ++KRAAEAFK W+GLPN Y+
Sbjct: 672 MEENGIPPNKSKYTRIYVEMHSRMFTSKHASKARQDRRSERKRAAEAFKFWLGLPNSYY 730