BLASTX nr result
ID: Ephedra27_contig00027661
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00027661 (520 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB... 70 2e-10 gb|AFK49064.1| unknown [Lotus japonicus] 48 6e-09 emb|CAA30522.1| ORF 143 [Glycine max] 48 8e-07 ref|NP_042502.1| ORF42g [Pinus thunbergii] gi|1262742|dbj|BAA044... 45 2e-06 ref|YP_001152252.1| ORF42g [Pinus koraiensis] gi|145048877|gb|AB... 45 3e-06 >ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus koraiensis] Length = 40 Score = 70.5 bits (171), Expect = 2e-10 Identities = 33/38 (86%), Positives = 34/38 (89%), Gaps = 1/38 (2%) Frame = +1 Query: 409 MQIESCRKPYSAKVVCTVWREIFHT-RGPPYNMESKSR 519 MQIESC KPYS KVVCTVWREIFHT R PPYNMESKS+ Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38 >gb|AFK49064.1| unknown [Lotus japonicus] Length = 128 Score = 47.8 bits (112), Expect(2) = 6e-09 Identities = 25/31 (80%), Positives = 25/31 (80%), Gaps = 1/31 (3%) Frame = +3 Query: 429 KAVFGESCMYGLEGDLSY-QGSTLQYGVKKP 518 KAVF ES MYGLEGDLSY STLQYG KKP Sbjct: 97 KAVFDESRMYGLEGDLSYLSRSTLQYGAKKP 127 Score = 38.1 bits (87), Expect(2) = 6e-09 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%) Frame = +2 Query: 266 NSFFYTINLRT*LYRYGKYKISGHS-KRKETDTQ*RVSKHH 385 ++ Y NLRT Y Y KY+IS S KR+ETDTQ +VSK + Sbjct: 43 STLHYFENLRTQSYGYVKYRISNPSKKRRETDTQFQVSKQN 83 >emb|CAA30522.1| ORF 143 [Glycine max] Length = 143 Score = 47.8 bits (112), Expect(2) = 8e-07 Identities = 25/31 (80%), Positives = 25/31 (80%), Gaps = 1/31 (3%) Frame = +3 Query: 429 KAVFGESCMYGLEGDLSY-QGSTLQYGVKKP 518 KAVF ES MYGLEGDLSY STLQYG KKP Sbjct: 112 KAVFDESRMYGLEGDLSYLSRSTLQYGAKKP 142 Score = 30.8 bits (68), Expect(2) = 8e-07 Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +2 Query: 266 NSFFYTINLRT*LYRYGKYKISGHS-KRKETDTQ*RVSKHH 385 ++ Y N RT Y Y KY+IS S KR TDTQ +VSK + Sbjct: 58 STLHYFGNPRTQSYGYVKYRISNPSRKRGGTDTQFQVSKQN 98 >ref|NP_042502.1| ORF42g [Pinus thunbergii] gi|1262742|dbj|BAA04457.1| ORF42g [Pinus thunbergii] Length = 42 Score = 44.7 bits (104), Expect(2) = 2e-06 Identities = 19/21 (90%), Positives = 19/21 (90%) Frame = -3 Query: 347 FFCYDRKSCIFHIYTIKSLGL 285 FFCYD KSCI HIYTIKSLGL Sbjct: 18 FFCYDWKSCILHIYTIKSLGL 38 Score = 32.3 bits (72), Expect(2) = 2e-06 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -1 Query: 394 MHIMMFTHSSLSIRFLSF 341 MHI++FTHS LSIR LSF Sbjct: 1 MHIILFTHSQLSIRSLSF 18 >ref|YP_001152252.1| ORF42g [Pinus koraiensis] gi|145048877|gb|ABP35492.1| ORF42g [Pinus koraiensis] Length = 42 Score = 44.7 bits (104), Expect(2) = 3e-06 Identities = 19/21 (90%), Positives = 19/21 (90%) Frame = -3 Query: 347 FFCYDRKSCIFHIYTIKSLGL 285 FFCYD KSCI HIYTIKSLGL Sbjct: 18 FFCYDWKSCILHIYTIKSLGL 38 Score = 32.0 bits (71), Expect(2) = 3e-06 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -1 Query: 394 MHIMMFTHSSLSIRFLSF 341 MHI++FTHS LSIR LSF Sbjct: 1 MHIILFTHSRLSIRSLSF 18