BLASTX nr result

ID: Ephedra27_contig00027639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00027639
         (815 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838131.1| hypothetical protein AMTR_s00106p00075970 [A...    59   3e-06

>ref|XP_006838131.1| hypothetical protein AMTR_s00106p00075970 [Amborella trichopoda]
           gi|548840589|gb|ERN00700.1| hypothetical protein
           AMTR_s00106p00075970 [Amborella trichopoda]
          Length = 513

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 50/137 (36%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
 Frame = -3

Query: 621 EEGESCGIQ*GSGANSEYLSQDHVAIEDLTLKD*CFEKLQRSLD*LLLSMIYD-ILGLGF 445
           E G+SC I  G+G+ S YLSQDHV + DL +KD  F +  +      L   +D ILGLGF
Sbjct: 142 ENGKSCEIHYGTGSVSGYLSQDHVQVGDLVVKDQVFIEATKEPSITFLVAKFDGILGLGF 201

Query: 444 QKYVTEKVVQLGIT*IVRAW*MNQSNLVIEHKF-------*TR*RGTNYIWRCLS*PLCW 286
           Q      VV +          M +  LV E  F            G   ++  +      
Sbjct: 202 QSISVGNVVPVWYN-------MVKKGLVKEPIFSFWFNRNAQDEEGGEIVFGGVDPNHFI 254

Query: 285 GTHTHTYVPVTKKGYWQ 235
           G   HTYVPVT+KGYWQ
Sbjct: 255 G--EHTYVPVTQKGYWQ 269


Top