BLASTX nr result
ID: Ephedra27_contig00027528
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00027528
(463 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006857021.1| hypothetical protein AMTR_s00197p00040880 [A... 69 6e-10
ref|XP_002879279.1| pentatricopeptide repeat-containing protein ... 66 5e-09
ref|XP_006294198.1| hypothetical protein CARUB_v10023194mg [Caps... 64 2e-08
gb|EOX94888.1| Pentatricopeptide repeat-containing protein, puta... 64 3e-08
ref|XP_002524769.1| pentatricopeptide repeat-containing protein,... 63 5e-08
ref|NP_180636.1| pentatricopeptide repeat-containing protein [Ar... 62 6e-08
ref|XP_006410178.1| hypothetical protein EUTSA_v10016605mg [Eutr... 62 8e-08
ref|XP_006294134.1| hypothetical protein CARUB_v10023129mg [Caps... 62 8e-08
ref|XP_006294133.1| hypothetical protein CARUB_v10023129mg [Caps... 62 8e-08
gb|ABD33237.1| Pentatricopeptide repeat [Medicago truncatula] 61 2e-07
ref|XP_003595573.1| Pentatricopeptide repeat-containing protein ... 61 2e-07
ref|XP_004963778.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_003616089.1| Pentatricopeptide repeat-containing protein ... 57 2e-06
ref|XP_003616088.1| Pentatricopeptide repeat-containing protein ... 57 2e-06
ref|XP_002882141.1| predicted protein [Arabidopsis lyrata subsp.... 57 2e-06
ref|NP_850482.3| pentatricopeptide repeat-containing protein-lik... 57 3e-06
gb|AAM20584.1| unknown protein [Arabidopsis thaliana] gi|2213646... 57 3e-06
ref|XP_006444185.1| hypothetical protein CICLE_v10019759mg [Citr... 57 3e-06
ref|XP_004488316.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_006360543.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
>ref|XP_006857021.1| hypothetical protein AMTR_s00197p00040880 [Amborella trichopoda]
gi|548861097|gb|ERN18488.1| hypothetical protein
AMTR_s00197p00040880 [Amborella trichopoda]
Length = 536
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/96 (36%), Positives = 57/96 (59%)
Frame = +3
Query: 6 VSEAYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTST 185
+ +YF V+ LE F KQA+ +GW+L ++H +M +Y S +F EME V EM
Sbjct: 432 IISSYFRCNAVDKLEVFIKQAEFAGWRLCRSLYHSKMVMYGSLNRFPEMESVIGEMEAFN 491
Query: 186 CIRPNRDTYLVLYRTYVEYGKQTELERTIENMRAAG 293
P + T+L+LY++YV+ G++ ++ R + M AG
Sbjct: 492 -FHPTKKTFLILYKSYVKSGQRNDVLRILGAMCKAG 526
>ref|XP_002879279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325118|gb|EFH55538.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 452
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/94 (32%), Positives = 55/94 (58%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
AYF +V+ L F K+A+ +GWKL ++H ++ +Y SQK+F+EME V EM +
Sbjct: 360 AYFRFNEVDNLANFVKRAESAGWKLCRSLYHCKIMMYGSQKRFEEMEGVLNEMAETNYGL 419
Query: 195 PNRDTYLVLYRTYVEYGKQTELERTIENMRAAGI 296
+ T+ ++Y+ Y +G +++ E+ M G+
Sbjct: 420 VTK-TFAIMYKAYKNHGMESDAEKVKGMMLKRGL 452
>ref|XP_006294198.1| hypothetical protein CARUB_v10023194mg [Capsella rubella]
gi|482562906|gb|EOA27096.1| hypothetical protein
CARUB_v10023194mg [Capsella rubella]
Length = 452
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/94 (32%), Positives = 55/94 (58%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
AYF +V+ L F K+A+ +GWKL ++H ++ +Y SQK+F+EME V EM +
Sbjct: 360 AYFRCNEVDNLANFVKRAESAGWKLCRSLYHCKIIMYGSQKRFEEMEGVVNEMAQTNYGL 419
Query: 195 PNRDTYLVLYRTYVEYGKQTELERTIENMRAAGI 296
+ T+ ++Y+ Y +G +++ E+ M G+
Sbjct: 420 VTK-TFAIMYKAYKSHGMESDAEKVKGKMLKLGL 452
>gb|EOX94888.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 529
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
AYF + V+ L F K+A+ +GW++ ++H +M +Y SQK+ +EME V EM +
Sbjct: 428 AYFRYNAVDKLANFVKRAECAGWRICRSLYHCKMVMYGSQKRLEEMENVLNEMDNFN-MD 486
Query: 195 PNRDTYLVLYRTYVEYGKQTELERTIENM--RAAGIP 299
+ T+ +LY+ Y GK+ ++E+ + M R GIP
Sbjct: 487 YTKKTFWILYKAYSMCGKRHKVEQVVGLMCKRGYGIP 523
>ref|XP_002524769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535953|gb|EEF37612.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 509
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/93 (34%), Positives = 56/93 (60%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
+YF V+ L F K+A+ SGW++ ++H +M +YAS+K+ DEME V +M R
Sbjct: 408 SYFRCNAVDRLADFVKRAECSGWRICRSLYHCKMVMYASEKRLDEMESVLNDMENFNLGR 467
Query: 195 PNRDTYLVLYRTYVEYGKQTELERTIENMRAAG 293
+ T+++LY+ Y+ GK+ ++E+ + M G
Sbjct: 468 -TKKTFVILYKAYLMCGKKYKVEQVLGLMYKHG 499
>ref|NP_180636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75219588|sp|O49343.1|PP177_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g30780 gi|2880055|gb|AAC02749.1| hypothetical protein
[Arabidopsis thaliana] gi|110736845|dbj|BAF00380.1|
hypothetical protein [Arabidopsis thaliana]
gi|330253346|gb|AEC08440.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 452
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/94 (31%), Positives = 54/94 (57%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
AYF +V+ L F K+A+ +GWKL ++H ++ +Y SQK+F+EME V EM +
Sbjct: 360 AYFRCNEVDNLANFVKRAESAGWKLCRSLYHCKIMMYGSQKRFEEMEGVVNEMAETNYGL 419
Query: 195 PNRDTYLVLYRTYVEYGKQTELERTIENMRAAGI 296
+ T+ ++ + Y +G +++ E+ M G+
Sbjct: 420 VTK-TFAIMIKAYKNHGMESDAEKVKGKMLKRGL 452
>ref|XP_006410178.1| hypothetical protein EUTSA_v10016605mg [Eutrema salsugineum]
gi|557111347|gb|ESQ51631.1| hypothetical protein
EUTSA_v10016605mg [Eutrema salsugineum]
Length = 471
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/96 (32%), Positives = 54/96 (56%)
Frame = +3
Query: 6 VSEAYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTST 185
+S AYF +V+ L F K+A+ +GWKL ++H ++ +Y SQK+F+EME V EM +
Sbjct: 357 ISAAYFRCNEVDSLVNFVKRAESAGWKLCRSLYHCKIMMYGSQKRFEEMEGVVNEMGETN 416
Query: 186 CIRPNRDTYLVLYRTYVEYGKQTELERTIENMRAAG 293
+ T+ ++ + Y +G + E+ + M G
Sbjct: 417 YGLVTK-TFAIMCKAYKSHGMELNAEKVMGKMLKHG 451
>ref|XP_006294134.1| hypothetical protein CARUB_v10023129mg [Capsella rubella]
gi|482562842|gb|EOA27032.1| hypothetical protein
CARUB_v10023129mg [Capsella rubella]
Length = 473
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +3
Query: 18 YFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIRP 197
YF V+ L KF ++A +GWK+S +FH M +Y SQK+F EME V +EM + R
Sbjct: 374 YFRCNAVDKLAKFVQRAHSAGWKMSRSMFHGLMLMYGSQKRFKEMENVLSEMESFNISR- 432
Query: 198 NRDTYLVLYRTYVEYGKQTELER 266
++ T +L+R Y +G++ ++ +
Sbjct: 433 SKKTLCILHRVYAMHGQEHKVNQ 455
>ref|XP_006294133.1| hypothetical protein CARUB_v10023129mg [Capsella rubella]
gi|482562841|gb|EOA27031.1| hypothetical protein
CARUB_v10023129mg [Capsella rubella]
Length = 437
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +3
Query: 18 YFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIRP 197
YF V+ L KF ++A +GWK+S +FH M +Y SQK+F EME V +EM + R
Sbjct: 338 YFRCNAVDKLAKFVQRAHSAGWKMSRSMFHGLMLMYGSQKRFKEMENVLSEMESFNISR- 396
Query: 198 NRDTYLVLYRTYVEYGKQTELER 266
++ T +L+R Y +G++ ++ +
Sbjct: 397 SKKTLCILHRVYAMHGQEHKVNQ 419
>gb|ABD33237.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 514
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/89 (31%), Positives = 53/89 (59%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
AYF + +E LEKF +++ +GW++ Y ++H ++ +Y SQK EM+ V EM S I+
Sbjct: 413 AYFRNNAIESLEKFTRRSVLAGWRMCYSLYHSKLVMYGSQKNLREMQNVLEEM-DSVNIQ 471
Query: 195 PNRDTYLVLYRTYVEYGKQTELERTIENM 281
+ T ++Y+ Y G+++ + + + M
Sbjct: 472 RTKKTMWIMYKAYWNCGQRSMVLKILGQM 500
>ref|XP_003595573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484621|gb|AES65824.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 621
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/89 (31%), Positives = 53/89 (59%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
AYF + +E LEKF +++ +GW++ Y ++H ++ +Y SQK EM+ V EM S I+
Sbjct: 413 AYFRNNAIESLEKFTRRSVLAGWRMCYSLYHSKLVMYGSQKNLREMQNVLEEM-DSVNIQ 471
Query: 195 PNRDTYLVLYRTYVEYGKQTELERTIENM 281
+ T ++Y+ Y G+++ + + + M
Sbjct: 472 RTKKTMWIMYKAYWNCGQRSMVLKILGQM 500
>ref|XP_004963778.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g30780-like [Setaria italica]
Length = 511
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +3
Query: 6 VSEAYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTST 185
V +YF V+ L F +QA+++GWKL ++H +M +Y + +EM RV EM S
Sbjct: 407 VISSYFQCDAVDKLAHFVRQAEEAGWKLCRSLYHCKMVMYGKHNRLEEMHRVLDEMECSK 466
Query: 186 CIRPNRDTYLVLYRTYVEYGKQTE 257
R + T+ ++Y+ YV G++TE
Sbjct: 467 FGR-TKKTFWIMYKAYVSCGRRTE 489
>ref|XP_003616089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517424|gb|AES99047.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 552
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/89 (30%), Positives = 52/89 (58%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
AYF + +E LEKF ++ +GW++ Y ++H ++ +Y SQK EM+ V EM S ++
Sbjct: 451 AYFRNNAIESLEKFTIRSVLAGWRMCYSLYHSKLVMYGSQKNLREMQNVLEEM-DSVNMQ 509
Query: 195 PNRDTYLVLYRTYVEYGKQTELERTIENM 281
+ T ++Y+ Y G+++ + + + M
Sbjct: 510 RTKKTLWIMYKAYWSCGQRSLVLKILGQM 538
>ref|XP_003616088.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517423|gb|AES99046.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 494
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/89 (30%), Positives = 52/89 (58%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
AYF + +E LEKF ++ +GW++ Y ++H ++ +Y SQK EM+ V EM S ++
Sbjct: 393 AYFRNNAIESLEKFTIRSVLAGWRMCYSLYHSKLVMYGSQKNLREMQNVLEEM-DSVNMQ 451
Query: 195 PNRDTYLVLYRTYVEYGKQTELERTIENM 281
+ T ++Y+ Y G+++ + + + M
Sbjct: 452 RTKKTLWIMYKAYWSCGQRSLVLKILGQM 480
>ref|XP_002882141.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327980|gb|EFH58400.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 323
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
+YF + L KF ++A +GWK+S +FH M +Y SQK+F EME V +EM R
Sbjct: 219 SYFRCNAADKLAKFMQRAISAGWKMSRSMFHGLMIMYGSQKRFKEMEDVLSEMERFNISR 278
Query: 195 PNRDTYLVLYRTYV-EYGKQTELERTIENMRAAGIPYFGRD 314
++ T+ +L+R YV +G++ ++ + M G + R+
Sbjct: 279 -SKKTFCILHRVYVAAHGQEHKVNQVAGMMLKDGHDLWRRE 318
>ref|NP_850482.3| pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
gi|75268024|sp|Q9ZU88.1|PP204_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g48000 gi|4249407|gb|AAD13704.1| hypothetical protein
[Arabidopsis thaliana] gi|330255828|gb|AEC10922.1|
pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
Length = 481
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
+YF V+ L KF ++A +GWK+S +FH M +Y SQK+F EME V +EM S I
Sbjct: 374 SYFRCNAVDKLAKFVQRANSAGWKMSRSMFHGLMIMYGSQKRFKEMENVLSEM-ESFKIS 432
Query: 195 PNRDTYLVLYRTY 233
++ T +L R Y
Sbjct: 433 RSKKTLCILLRVY 445
>gb|AAM20584.1| unknown protein [Arabidopsis thaliana] gi|22136460|gb|AAM91308.1|
unknown protein [Arabidopsis thaliana]
Length = 367
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +3
Query: 15 AYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIR 194
+YF V+ L KF ++A +GWK+S +FH M +Y SQK+F EME V +EM S I
Sbjct: 260 SYFRCNAVDKLAKFVQRANSAGWKMSRSMFHGLMIMYGSQKRFKEMENVLSEM-ESFKIS 318
Query: 195 PNRDTYLVLYRTY 233
++ T +L R Y
Sbjct: 319 RSKKTLCILLRVY 331
>ref|XP_006444185.1| hypothetical protein CICLE_v10019759mg [Citrus clementina]
gi|567903396|ref|XP_006444186.1| hypothetical protein
CICLE_v10019759mg [Citrus clementina]
gi|568852322|ref|XP_006479827.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g30780-like isoform X1 [Citrus sinensis]
gi|557546447|gb|ESR57425.1| hypothetical protein
CICLE_v10019759mg [Citrus clementina]
gi|557546448|gb|ESR57426.1| hypothetical protein
CICLE_v10019759mg [Citrus clementina]
Length = 513
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/89 (30%), Positives = 52/89 (58%)
Frame = +3
Query: 6 VSEAYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTST 185
+ +YF V+ L F K+A+ +GW+L ++H +M +YASQ++ +EME V EM
Sbjct: 409 IVSSYFRCNAVDKLANFVKRAESAGWRLCRSLYHSKMVMYASQRRVEEMESVLKEMENYK 468
Query: 186 CIRPNRDTYLVLYRTYVEYGKQTELERTI 272
I ++ T+ ++Y Y G++ ++ + +
Sbjct: 469 -IDCSKKTFWIMYYAYATCGQRRKVNQVL 496
>ref|XP_004488316.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g30780-like [Cicer arietinum]
Length = 506
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/72 (36%), Positives = 42/72 (58%)
Frame = +3
Query: 18 YFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTSTCIRP 197
YF H +E LE F ++A +GW++ ++H +M +Y SQK EM+ V EM + I
Sbjct: 406 YFRHNSLEKLEDFVRRAAFAGWRVCQSLYHCKMVMYGSQKNLKEMQNVLQEM-NNVNINC 464
Query: 198 NRDTYLVLYRTY 233
N+ T ++Y+ Y
Sbjct: 465 NKKTLWIMYKAY 476
>ref|XP_006360543.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g30780-like [Solanum tuberosum]
Length = 504
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +3
Query: 6 VSEAYFFHKDVEGLEKFAKQAKKSGWKLSYVVFHYRMQLYASQKQFDEMERVFAEMTTST 185
+ +YF + V+ L F +A+ +GWK+ ++H +M +Y+SQK+ EME+V +EM
Sbjct: 403 IISSYFRNNAVDKLANFVSRAECAGWKICRSLYHCKMVMYSSQKRLIEMEKVLSEM-DKV 461
Query: 186 CIRPNRDTYLVLYRTYVEYGKQTELERTIENM--RAAGIPYFG 308
+ ++ T +L + Y +G++ +L + + M GIP G
Sbjct: 462 NLDFSKKTLWILLKAYGTWGEKDKLHQVLGMMCRHGYGIPING 504