BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00027106
         (439 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERE76345.1| ubiquitin carboxyl-terminal hydrolase 42-like pro...    96   6e-18
ref|XP_005368085.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    96   6e-18
ref|XP_005080080.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    96   6e-18
ref|XP_003496353.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    96   6e-18
ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    95   8e-18
ref|XP_003465820.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    95   1e-17
ref|XP_006889821.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   1e-17
ref|XP_005003767.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   1e-17
ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   1e-17
ref|NP_084025.2| ubiquitin carboxyl-terminal hydrolase 42 [Mus m...    94   1e-17
gb|AAR01977.1| DUB1 [Mus musculus]                                     94   1e-17
ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Ra...    94   1e-17
ref|XP_006941993.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   2e-17
ref|XP_006906664.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   2e-17
ref|XP_006859921.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   2e-17
ref|XP_006765537.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...    94   2e-17
ref|XP_006715853.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   2e-17
ref|XP_006150254.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   2e-17
ref|XP_006210481.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...    94   2e-17
ref|XP_006195948.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin sp...    94   2e-17

>gb|ERE76345.1| ubiquitin carboxyl-terminal hydrolase 42-like protein [Cricetulus
           griseus]
          Length = 1331

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 39/87 (44%), Positives = 60/87 (68%)
 Frame = +1

Query: 160 AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDK 339
           +H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C+++ H+ +
Sbjct: 105 SHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQTHITQ 164

Query: 340 VLSNPREVVSPYNFFHNVSGLSLSARF 420
            LSNP +V+ P    + +  ++   RF
Sbjct: 165 ALSNPGDVIKPMFVINEMRRIARHFRF 191


>ref|XP_005368085.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Microtus
           ochrogaster]
          Length = 1332

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 39/87 (44%), Positives = 60/87 (68%)
 Frame = +1

Query: 160 AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDK 339
           +H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C+++ H+ +
Sbjct: 105 SHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQTHITQ 164

Query: 340 VLSNPREVVSPYNFFHNVSGLSLSARF 420
            LSNP +V+ P    + +  ++   RF
Sbjct: 165 ALSNPGDVIKPMFVINEMRRIARHFRF 191


>ref|XP_005080080.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Mesocricetus
           auratus]
          Length = 1330

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 39/87 (44%), Positives = 60/87 (68%)
 Frame = +1

Query: 160 AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDK 339
           +H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C+++ H+ +
Sbjct: 105 SHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQTHITQ 164

Query: 340 VLSNPREVVSPYNFFHNVSGLSLSARF 420
            LSNP +V+ P    + +  ++   RF
Sbjct: 165 ALSNPGDVIKPMFVINEMRRIARHFRF 191


>ref|XP_003496353.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
           [Cricetulus griseus]
          Length = 1285

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 39/87 (44%), Positives = 60/87 (68%)
 Frame = +1

Query: 160 AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDK 339
           +H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C+++ H+ +
Sbjct: 105 SHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQTHITQ 164

Query: 340 VLSNPREVVSPYNFFHNVSGLSLSARF 420
            LSNP +V+ P    + +  ++   RF
Sbjct: 165 ALSNPGDVIKPMFVINEMRRIARHFRF 191


>ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
           garnettii]
          Length = 1330

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 39/86 (45%), Positives = 59/86 (68%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C+++ H+ + 
Sbjct: 107 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQAHITQA 166

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRF 192


>ref|XP_003465820.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
           porcellus]
          Length = 1056

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 39/87 (44%), Positives = 59/87 (67%)
 Frame = +1

Query: 160 AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDK 339
           +H VGAGL+NLGN+C++NAALQCLTYT PL  Y+ +  HT  C + GFC+ C+++ H+ +
Sbjct: 105 SHRVGAGLQNLGNTCFVNAALQCLTYTPPLANYMLSREHTKTCHAGGFCVMCIMQAHIIQ 164

Query: 340 VLSNPREVVSPYNFFHNVSGLSLSARF 420
            LS+P + + P      + G++   RF
Sbjct: 165 ALSHPGDAIKPIAVISELQGIASHFRF 191


>ref|XP_006889821.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Elephantulus
           edwardii]
          Length = 1333

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 39/87 (44%), Positives = 59/87 (67%)
 Frame = +1

Query: 160 AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDK 339
           +H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ +
Sbjct: 106 SHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQ 165

Query: 340 VLSNPREVVSPYNFFHNVSGLSLSARF 420
            LSNP +V+ P    + +  ++   RF
Sbjct: 166 ALSNPGDVIKPMFVINEMRRIARHFRF 192


>ref|XP_005003767.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like isoform X2
           [Cavia porcellus]
          Length = 1316

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 105 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 164

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 165 LSNPGDVIKPMFVINEMQRIARHFRF 190


>ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like isoform X1
           [Cavia porcellus]
          Length = 1328

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 105 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 164

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 165 LSNPGDVIKPMFVINEMQRIARHFRF 190


>ref|NP_084025.2| ubiquitin carboxyl-terminal hydrolase 42 [Mus musculus]
           gi|568938825|ref|XP_006504817.1| PREDICTED: ubiquitin
           carboxyl-terminal hydrolase 42 isoform X1 [Mus musculus]
           gi|568938827|ref|XP_006504818.1| PREDICTED: ubiquitin
           carboxyl-terminal hydrolase 42 isoform X2 [Mus musculus]
           gi|568938829|ref|XP_006504819.1| PREDICTED: ubiquitin
           carboxyl-terminal hydrolase 42 isoform X3 [Mus musculus]
           gi|322967639|sp|B2RQC2.1|UBP42_MOUSE RecName:
           Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
           Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
           thioesterase 42; AltName:
           Full=Ubiquitin-specific-processing protease 42
           gi|148687090|gb|EDL19037.1| ubiquitin specific peptidase
           42 [Mus musculus] gi|187953717|gb|AAI37853.1| Ubiquitin
           specific peptidase 42 [Mus musculus]
          Length = 1324

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 39/87 (44%), Positives = 59/87 (67%)
 Frame = +1

Query: 160 AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDK 339
           +H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ +
Sbjct: 105 SHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQ 164

Query: 340 VLSNPREVVSPYNFFHNVSGLSLSARF 420
            LSNP +V+ P    + +  ++   RF
Sbjct: 165 ALSNPGDVIKPMFVINEMRRIARHFRF 191


>gb|AAR01977.1| DUB1 [Mus musculus]
          Length = 729

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 39/87 (44%), Positives = 59/87 (67%)
 Frame = +1

Query: 160 AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDK 339
           +H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ +
Sbjct: 105 SHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQ 164

Query: 340 VLSNPREVVSPYNFFHNVSGLSLSARF 420
            LSNP +V+ P    + +  ++   RF
Sbjct: 165 ALSNPGDVIKPMFVINEMRRIARHFRF 191


>ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Rattus norvegicus]
           gi|564378218|ref|XP_006248926.1| PREDICTED: ubiquitin
           carboxyl-terminal hydrolase 42 isoform X1 [Rattus
           norvegicus] gi|322967640|sp|D3ZU96.1|UBP42_RAT RecName:
           Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
           Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
           thioesterase 42; AltName:
           Full=Ubiquitin-specific-processing protease 42
           gi|149034935|gb|EDL89655.1| ubiquitin specific protease
           42 (predicted) [Rattus norvegicus]
          Length = 1325

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 39/87 (44%), Positives = 59/87 (67%)
 Frame = +1

Query: 160 AHFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDK 339
           +H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ +
Sbjct: 105 SHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQ 164

Query: 340 VLSNPREVVSPYNFFHNVSGLSLSARF 420
            LSNP +V+ P    + +  ++   RF
Sbjct: 165 ALSNPGDVIKPMFVINEMRRIARHFRF 191


>ref|XP_006941993.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
          Length = 1320

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 107 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 166

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRF 192


>ref|XP_006906664.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pteropus
           alecto]
          Length = 1292

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 107 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 166

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRF 192


>ref|XP_006859921.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Chrysochloris
           asiatica]
          Length = 1339

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 107 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 166

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRF 192


>ref|XP_006765537.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 42 [Myotis davidii]
          Length = 1286

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 107 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 166

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRF 192


>ref|XP_006715853.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform X3
           [Homo sapiens] gi|578813668|ref|XP_006715854.1|
           PREDICTED: ubiquitin carboxyl-terminal hydrolase 42
           isoform X4 [Homo sapiens]
          Length = 1327

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 107 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 166

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRF 192


>ref|XP_006150254.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like isoform X1
           [Tupaia chinensis] gi|562842379|ref|XP_006150255.1|
           PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
           isoform X2 [Tupaia chinensis]
           gi|562842381|ref|XP_006150256.1| PREDICTED: ubiquitin
           carboxyl-terminal hydrolase 42-like isoform X3 [Tupaia
           chinensis]
          Length = 1231

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 107 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 166

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRF 192


>ref|XP_006210481.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 42 [Vicugna pacos]
          Length = 1429

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 107 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 166

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRF 192


>ref|XP_006195948.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin specific peptidase 42
           [Camelus ferus]
          Length = 1233

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +1

Query: 163 HFVGAGLRNLGNSCYLNAALQCLTYTRPLVTYLWNSPHTIPCESQGFCLFCVLKQHVDKV 342
           H VGAGL+NLGN+C+ NAALQCLTYT PL  Y+ +  H+  C ++GFC+ C ++ H+ + 
Sbjct: 107 HRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQA 166

Query: 343 LSNPREVVSPYNFFHNVSGLSLSARF 420
           LSNP +V+ P    + +  ++   RF
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRF 192