BLASTX nr result

ID: Ephedra27_contig00026944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026944
         (411 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77417.1| unknown [Picea sitchensis]                             134   2e-29
gb|ADE76469.1| unknown [Picea sitchensis]                             134   2e-29
ref|XP_006846342.1| hypothetical protein AMTR_s00012p00258090 [A...   124   1e-26
ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago t...   118   9e-25
ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ...   117   2e-24
gb|EOX93311.1| RNA-binding family protein isoform 1 [Theobroma c...   114   1e-23
ref|XP_004502036.1| PREDICTED: RNA-binding protein Musashi homol...   113   3e-23
ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [...   113   3e-23
ref|XP_006357956.1| PREDICTED: glycine-rich RNA-binding protein ...   112   4e-23
gb|EXB37811.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]   112   5e-23
ref|NP_001130982.1| hypothetical protein [Zea mays] gi|194690622...   112   5e-23
ref|XP_004305987.1| PREDICTED: glycine-rich RNA-binding protein ...   111   9e-23
ref|XP_006447631.1| hypothetical protein CICLE_v10017091mg [Citr...   110   3e-22
ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein ...   110   3e-22
ref|XP_004243523.1| PREDICTED: glycine-rich RNA-binding protein ...   109   3e-22
ref|NP_187457.1| RNA recognition motif-containing protein [Arabi...   109   4e-22
ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein ...   108   6e-22
ref|XP_004971023.1| PREDICTED: glycine-rich RNA-binding protein ...   108   7e-22
ref|XP_004971022.1| PREDICTED: glycine-rich RNA-binding protein ...   108   7e-22
ref|XP_001769839.1| predicted protein [Physcomitrella patens] gi...   107   1e-21

>gb|ADE77417.1| unknown [Picea sitchensis]
          Length = 175

 Score =  134 bits (336), Expect = 2e-29
 Identities = 69/111 (62%), Positives = 79/111 (71%), Gaps = 14/111 (12%)
 Frame = -1

Query: 294 IFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTE--------------VRIMYD 157
           + H TTR  AS  LFVGGLAW+ DEKT++DAFSTYG VTE              VRIMYD
Sbjct: 33  LLHVTTRGLASSKLFVGGLAWHADEKTIKDAFSTYGDVTEGWPTGGPVYASSNTVRIMYD 92

Query: 156 RDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGKSPNPRS 4
           RDSGRSRGFGF+HFS E+SA+ AK GMDG+E  GRP+RID+AI K    RS
Sbjct: 93  RDSGRSRGFGFIHFSNESSAEDAKNGMDGKELLGRPLRIDYAIDKPAAGRS 143


>gb|ADE76469.1| unknown [Picea sitchensis]
          Length = 175

 Score =  134 bits (336), Expect = 2e-29
 Identities = 69/111 (62%), Positives = 79/111 (71%), Gaps = 14/111 (12%)
 Frame = -1

Query: 294 IFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTE--------------VRIMYD 157
           + H TTR  AS  LFVGGLAW+ DEKT++DAFSTYG VTE              VRIMYD
Sbjct: 33  LLHVTTRGLASSKLFVGGLAWHADEKTIKDAFSTYGDVTEGWPTGGPVYASSNTVRIMYD 92

Query: 156 RDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGKSPNPRS 4
           RDSGRSRGFGF+HFS E+SA+ AK GMDG+E  GRP+RID+AI K    RS
Sbjct: 93  RDSGRSRGFGFIHFSNESSAEDAKNGMDGKELLGRPLRIDYAIDKPAAGRS 143


>ref|XP_006846342.1| hypothetical protein AMTR_s00012p00258090 [Amborella trichopoda]
           gi|548849112|gb|ERN08017.1| hypothetical protein
           AMTR_s00012p00258090 [Amborella trichopoda]
          Length = 132

 Score =  124 bits (311), Expect = 1e-26
 Identities = 59/96 (61%), Positives = 74/96 (77%)
 Frame = -1

Query: 309 LLTKSIFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGF 130
           LL+ S+ H    S +S  LFVGGL+W VDEK+L+D+FS++G VTEVRI+YDRDSGRSRGF
Sbjct: 18  LLSSSLLHRRCMSTSSSRLFVGGLSWGVDEKSLKDSFSSFGDVTEVRIIYDRDSGRSRGF 77

Query: 129 GFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
           GF++FS E  AK AK+ MDG+   GRP+RI  AI K
Sbjct: 78  GFIYFSNEDEAKCAKDAMDGKALLGRPLRISFAIEK 113


>ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
           gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding
           protein [Medicago truncatula]
          Length = 135

 Score =  118 bits (295), Expect = 9e-25
 Identities = 59/103 (57%), Positives = 79/103 (76%), Gaps = 5/103 (4%)
 Frame = -1

Query: 315 QHLLTKS-----IFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRD 151
           QHL   S      F++++ S +S  LFVGGL+W+VDEK+L+DAFS++G VTEVRI+YD+D
Sbjct: 13  QHLRPSSHPQFRFFNSSSSSASSNKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKD 72

Query: 150 SGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
           SGR+RGFGFV FS E +AK AK+ MDG+   GRP+RI+ A+ K
Sbjct: 73  SGRARGFGFVIFSNEDAAKSAKDAMDGKALLGRPLRINFALEK 115


>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
           product [Vitis vinifera]
          Length = 140

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/88 (62%), Positives = 72/88 (81%), Gaps = 4/88 (4%)
 Frame = -1

Query: 273 SFASP----SLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEE 106
           SF +P     LFV GL+W+VDEK+L+DAFS++G VTEVRIMYD+DSGRSRGFGFV+FS+E
Sbjct: 30  SFPTPPSNTKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKE 89

Query: 105 ASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
             A+ AK+ MDG+ F GRP+R+ +A+ K
Sbjct: 90  VDARSAKDAMDGKAFLGRPLRVSYALEK 117


>gb|EOX93311.1| RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 137

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/88 (60%), Positives = 71/88 (80%)
 Frame = -1

Query: 285 NTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEE 106
           ++TR   +  LFV GL+W+VDEK+L+DAFS++G V+EVRIMYD+D+GRSRGFGFVHFS+E
Sbjct: 34  SSTRPPPNGKLFVAGLSWSVDEKSLKDAFSSFGHVSEVRIMYDKDTGRSRGFGFVHFSKE 93

Query: 105 ASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
             A+ AK+ MDG+   GRP+RI  A+ K
Sbjct: 94  DEARCAKDAMDGKALLGRPLRISFALEK 121


>ref|XP_004502036.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cicer
           arietinum]
          Length = 180

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/82 (64%), Positives = 68/82 (82%)
 Frame = -1

Query: 267 ASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLA 88
           +S  LFVGGL+W+VDEK+L+DAFS++G VTEVRI+YD+D+GRSRGFGFV FS E  AK A
Sbjct: 77  SSNKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDTGRSRGFGFVIFSNEEHAKSA 136

Query: 87  KEGMDGQEFKGRPIRIDHAIGK 22
           K+ MDG+   GRP+RI+ A+ K
Sbjct: 137 KDSMDGKALLGRPLRINFALDK 158


>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 126

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/89 (59%), Positives = 70/89 (78%)
 Frame = -1

Query: 288 HNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSE 109
           HN+     +  LFV GL+W+VDEK+L+DAFS++G+V+EVRIMYD+DSGRSRGFGFV+FS+
Sbjct: 16  HNSPSPPPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSK 75

Query: 108 EASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
           E  A  AK+ MDG+   GRP+RI  A+ K
Sbjct: 76  ENEAVCAKDAMDGKALLGRPLRISFALEK 104


>ref|XP_006357956.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 151

 Score =  112 bits (281), Expect = 4e-23
 Identities = 52/96 (54%), Positives = 73/96 (76%)
 Frame = -1

Query: 309 LLTKSIFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGF 130
           LL  +   +++    +  LFV GL+W+VDEK+L DAFS++GQVTEVRIMYD+++GRSRGF
Sbjct: 34  LLPNNKLFSSSSLLPNNKLFVAGLSWSVDEKSLSDAFSSFGQVTEVRIMYDKETGRSRGF 93

Query: 129 GFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
           GFV+FS++  A  AK+ MDG+ F GRP+R+  A+ K
Sbjct: 94  GFVYFSKDEEASSAKDSMDGKAFLGRPLRVSFALEK 129


>gb|EXB37811.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]
          Length = 153

 Score =  112 bits (280), Expect = 5e-23
 Identities = 51/88 (57%), Positives = 72/88 (81%)
 Frame = -1

Query: 285 NTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEE 106
           +++ + ++  LFVGGL+W+VDEK+L+DAFS++G+V+EVRI+YD+DSGRSRGFGFVHF +E
Sbjct: 44  SSSSTTSNNKLFVGGLSWSVDEKSLKDAFSSFGEVSEVRILYDKDSGRSRGFGFVHFLKE 103

Query: 105 ASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
             A  AK+ MDG+   GRP+RI  A+ K
Sbjct: 104 EDAVSAKDSMDGKALLGRPLRISFALEK 131


>ref|NP_001130982.1| hypothetical protein [Zea mays] gi|194690622|gb|ACF79395.1| unknown
           [Zea mays] gi|413951564|gb|AFW84213.1| hypothetical
           protein ZEAMMB73_909652 [Zea mays]
          Length = 142

 Score =  112 bits (280), Expect = 5e-23
 Identities = 51/78 (65%), Positives = 65/78 (83%)
 Frame = -1

Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
           LFV GL+W+VDE++L DAFS++G VTEVRIMYD++SGRSRGFGFVHFS +  AK AK+ M
Sbjct: 50  LFVAGLSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRGFGFVHFSNDNEAKCAKDAM 109

Query: 75  DGQEFKGRPIRIDHAIGK 22
           DG+   GRP+RI  A+G+
Sbjct: 110 DGKVMLGRPLRISFALGR 127


>ref|XP_004305987.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Fragaria vesca subsp. vesca]
          Length = 139

 Score =  111 bits (278), Expect = 9e-23
 Identities = 54/93 (58%), Positives = 73/93 (78%)
 Frame = -1

Query: 306 LTKSIFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFG 127
           L K  F +++ S  +  LFVGGL+W++DEK+L++AFS+YG+VTEV I+YD+DSGRSRGFG
Sbjct: 25  LLKRCFSSSSSS-PNNKLFVGGLSWSLDEKSLKEAFSSYGEVTEVTIVYDKDSGRSRGFG 83

Query: 126 FVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAI 28
           FV+FS E  AK AK+ MDG+   GRP+RI  A+
Sbjct: 84  FVNFSREDDAKSAKDAMDGKALMGRPLRISFAL 116


>ref|XP_006447631.1| hypothetical protein CICLE_v10017091mg [Citrus clementina]
           gi|568830698|ref|XP_006469627.1| PREDICTED: glycine-rich
           RNA-binding protein 4, mitochondrial-like [Citrus
           sinensis] gi|557550242|gb|ESR60871.1| hypothetical
           protein CICLE_v10017091mg [Citrus clementina]
          Length = 145

 Score =  110 bits (274), Expect = 3e-22
 Identities = 50/76 (65%), Positives = 64/76 (84%)
 Frame = -1

Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
           LFV GL+W VDEK+L+DAFS++G+VTEV+I+YD+DSGRSRGFGFVHFS+E  A+ AK  M
Sbjct: 46  LFVAGLSWTVDEKSLKDAFSSFGEVTEVKIIYDKDSGRSRGFGFVHFSKEDDAESAKHAM 105

Query: 75  DGQEFKGRPIRIDHAI 28
           DG+   GRP+RI  A+
Sbjct: 106 DGKGLLGRPLRISFAL 121


>ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           [Glycine max]
          Length = 137

 Score =  110 bits (274), Expect = 3e-22
 Identities = 59/118 (50%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
 Frame = -1

Query: 369 RKMASWSRPLLWKQRATCQHLLTKSIFHNTTRSFASPS-LFVGGLAWNVDEKTLEDAFST 193
           +K  ++    +WK R       T+  F+ +  S AS + LFVGGL+W+VD K+L++AFS+
Sbjct: 2   KKCVAFLATTIWK-RFHVSPPQTQCRFYCSPPSHASSNKLFVGGLSWSVDHKSLKEAFSS 60

Query: 192 YGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGKS 19
           +G VTEV I+YD+DSGRSRGFGFV FS E  AK AK+ MDG+   GRP+RI+ A+ K+
Sbjct: 61  FGDVTEVTIVYDKDSGRSRGFGFVIFSNEDDAKCAKDAMDGKALLGRPLRINFALEKA 118


>ref|XP_004243523.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Solanum lycopersicum]
          Length = 141

 Score =  109 bits (273), Expect = 3e-22
 Identities = 49/78 (62%), Positives = 65/78 (83%)
 Frame = -1

Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
           LFV GL+W+VDEK+L DAFS++GQVTEVRIMYD+++GRSRGFGFV+F ++  A  AK+ M
Sbjct: 42  LFVAGLSWSVDEKSLSDAFSSFGQVTEVRIMYDKETGRSRGFGFVYFLKDEEASSAKDSM 101

Query: 75  DGQEFKGRPIRIDHAIGK 22
           DG+ F GRP+R+  A+ K
Sbjct: 102 DGKAFLGRPLRVSFALEK 119


>ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|6648212|gb|AAF21210.1|AC013483_34 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis
           thaliana] gi|46359799|gb|AAS88763.1| At3g08000
           [Arabidopsis thaliana] gi|332641108|gb|AEE74629.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 143

 Score =  109 bits (272), Expect = 4e-22
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 6/111 (5%)
 Frame = -1

Query: 342 LLWKQRATCQHLLTKSIFHNT----TRSFASPS--LFVGGLAWNVDEKTLEDAFSTYGQV 181
           L+ +  A  QH ++ S FH      T S ASPS  LF+GGL+W+VDE++L+DAFS++G+V
Sbjct: 9   LVRRVSAIPQHSISSS-FHFLPQFCTSSSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEV 67

Query: 180 TEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAI 28
            EVRI YD+ SGRSRGFGFV F+EE  A  AK+ MDG+   GRP+RI  A+
Sbjct: 68  AEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRISFAL 118


>ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Brachypodium distachyon]
          Length = 141

 Score =  108 bits (271), Expect = 6e-22
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = -1

Query: 267 ASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLA 88
           ++P LFV GL+W+ DE++L DAFS++G VTEVRIMYD++SGRSRGFGFV FS +  AK A
Sbjct: 45  SNPKLFVAGLSWSADERSLMDAFSSFGTVTEVRIMYDKNSGRSRGFGFVQFSNDYEAKCA 104

Query: 87  KEGMDGQEFKGRPIRIDHAIGK 22
           K+ MDG+   GR ++I +A+GK
Sbjct: 105 KDAMDGKVMLGRSLKISYALGK 126


>ref|XP_004971023.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           isoform X2 [Setaria italica]
          Length = 143

 Score =  108 bits (270), Expect = 7e-22
 Identities = 50/78 (64%), Positives = 63/78 (80%)
 Frame = -1

Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
           LFV GL+W+VDE++L DAFST+G VTEVRI+YD++SGR RGFGFVHFS +  AK AK+ M
Sbjct: 51  LFVAGLSWSVDERSLTDAFSTFGTVTEVRIIYDKNSGRPRGFGFVHFSNDHEAKCAKDAM 110

Query: 75  DGQEFKGRPIRIDHAIGK 22
           DG+   GRP+RI  A+ K
Sbjct: 111 DGKVMLGRPLRISFALEK 128


>ref|XP_004971022.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           isoform X1 [Setaria italica]
          Length = 145

 Score =  108 bits (270), Expect = 7e-22
 Identities = 50/78 (64%), Positives = 63/78 (80%)
 Frame = -1

Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
           LFV GL+W+VDE++L DAFST+G VTEVRI+YD++SGR RGFGFVHFS +  AK AK+ M
Sbjct: 51  LFVAGLSWSVDERSLTDAFSTFGTVTEVRIIYDKNSGRPRGFGFVHFSNDHEAKCAKDAM 110

Query: 75  DGQEFKGRPIRIDHAIGK 22
           DG+   GRP+RI  A+ K
Sbjct: 111 DGKVMLGRPLRISFALEK 128


>ref|XP_001769839.1| predicted protein [Physcomitrella patens]
           gi|162678948|gb|EDQ65401.1| predicted protein
           [Physcomitrella patens]
          Length = 133

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/118 (47%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
 Frame = -1

Query: 330 QRATCQHLLTKSIFHNTT----------RSFASPSLFVGGLAWNVDEKTLEDAFSTYGQV 181
           +R+  Q +LT S   + T          R  +S  LF+GGLAW  DE TL DAFS++G V
Sbjct: 12  RRSAAQSVLTASGLGSATVAVPAMLVAQRMMSSSKLFIGGLAWATDENTLRDAFSSFGTV 71

Query: 180 TEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGKSPNPR 7
           TEV+I+ DRD+GRSRGFGFV+F+    A++A + MDG+E  GR IR+D+A  K+   R
Sbjct: 72  TEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEMDGRELAGRQIRVDYATDKARETR 129


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