BLASTX nr result
ID: Ephedra27_contig00026944
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00026944
(411 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77417.1| unknown [Picea sitchensis] 134 2e-29
gb|ADE76469.1| unknown [Picea sitchensis] 134 2e-29
ref|XP_006846342.1| hypothetical protein AMTR_s00012p00258090 [A... 124 1e-26
ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago t... 118 9e-25
ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ... 117 2e-24
gb|EOX93311.1| RNA-binding family protein isoform 1 [Theobroma c... 114 1e-23
ref|XP_004502036.1| PREDICTED: RNA-binding protein Musashi homol... 113 3e-23
ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [... 113 3e-23
ref|XP_006357956.1| PREDICTED: glycine-rich RNA-binding protein ... 112 4e-23
gb|EXB37811.1| Glycine-rich RNA-binding protein 2 [Morus notabilis] 112 5e-23
ref|NP_001130982.1| hypothetical protein [Zea mays] gi|194690622... 112 5e-23
ref|XP_004305987.1| PREDICTED: glycine-rich RNA-binding protein ... 111 9e-23
ref|XP_006447631.1| hypothetical protein CICLE_v10017091mg [Citr... 110 3e-22
ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein ... 110 3e-22
ref|XP_004243523.1| PREDICTED: glycine-rich RNA-binding protein ... 109 3e-22
ref|NP_187457.1| RNA recognition motif-containing protein [Arabi... 109 4e-22
ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein ... 108 6e-22
ref|XP_004971023.1| PREDICTED: glycine-rich RNA-binding protein ... 108 7e-22
ref|XP_004971022.1| PREDICTED: glycine-rich RNA-binding protein ... 108 7e-22
ref|XP_001769839.1| predicted protein [Physcomitrella patens] gi... 107 1e-21
>gb|ADE77417.1| unknown [Picea sitchensis]
Length = 175
Score = 134 bits (336), Expect = 2e-29
Identities = 69/111 (62%), Positives = 79/111 (71%), Gaps = 14/111 (12%)
Frame = -1
Query: 294 IFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTE--------------VRIMYD 157
+ H TTR AS LFVGGLAW+ DEKT++DAFSTYG VTE VRIMYD
Sbjct: 33 LLHVTTRGLASSKLFVGGLAWHADEKTIKDAFSTYGDVTEGWPTGGPVYASSNTVRIMYD 92
Query: 156 RDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGKSPNPRS 4
RDSGRSRGFGF+HFS E+SA+ AK GMDG+E GRP+RID+AI K RS
Sbjct: 93 RDSGRSRGFGFIHFSNESSAEDAKNGMDGKELLGRPLRIDYAIDKPAAGRS 143
>gb|ADE76469.1| unknown [Picea sitchensis]
Length = 175
Score = 134 bits (336), Expect = 2e-29
Identities = 69/111 (62%), Positives = 79/111 (71%), Gaps = 14/111 (12%)
Frame = -1
Query: 294 IFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTE--------------VRIMYD 157
+ H TTR AS LFVGGLAW+ DEKT++DAFSTYG VTE VRIMYD
Sbjct: 33 LLHVTTRGLASSKLFVGGLAWHADEKTIKDAFSTYGDVTEGWPTGGPVYASSNTVRIMYD 92
Query: 156 RDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGKSPNPRS 4
RDSGRSRGFGF+HFS E+SA+ AK GMDG+E GRP+RID+AI K RS
Sbjct: 93 RDSGRSRGFGFIHFSNESSAEDAKNGMDGKELLGRPLRIDYAIDKPAAGRS 143
>ref|XP_006846342.1| hypothetical protein AMTR_s00012p00258090 [Amborella trichopoda]
gi|548849112|gb|ERN08017.1| hypothetical protein
AMTR_s00012p00258090 [Amborella trichopoda]
Length = 132
Score = 124 bits (311), Expect = 1e-26
Identities = 59/96 (61%), Positives = 74/96 (77%)
Frame = -1
Query: 309 LLTKSIFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGF 130
LL+ S+ H S +S LFVGGL+W VDEK+L+D+FS++G VTEVRI+YDRDSGRSRGF
Sbjct: 18 LLSSSLLHRRCMSTSSSRLFVGGLSWGVDEKSLKDSFSSFGDVTEVRIIYDRDSGRSRGF 77
Query: 129 GFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
GF++FS E AK AK+ MDG+ GRP+RI AI K
Sbjct: 78 GFIYFSNEDEAKCAKDAMDGKALLGRPLRISFAIEK 113
>ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding
protein [Medicago truncatula]
Length = 135
Score = 118 bits (295), Expect = 9e-25
Identities = 59/103 (57%), Positives = 79/103 (76%), Gaps = 5/103 (4%)
Frame = -1
Query: 315 QHLLTKS-----IFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRD 151
QHL S F++++ S +S LFVGGL+W+VDEK+L+DAFS++G VTEVRI+YD+D
Sbjct: 13 QHLRPSSHPQFRFFNSSSSSASSNKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKD 72
Query: 150 SGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
SGR+RGFGFV FS E +AK AK+ MDG+ GRP+RI+ A+ K
Sbjct: 73 SGRARGFGFVIFSNEDAAKSAKDAMDGKALLGRPLRINFALEK 115
>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
product [Vitis vinifera]
Length = 140
Score = 117 bits (293), Expect = 2e-24
Identities = 55/88 (62%), Positives = 72/88 (81%), Gaps = 4/88 (4%)
Frame = -1
Query: 273 SFASP----SLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEE 106
SF +P LFV GL+W+VDEK+L+DAFS++G VTEVRIMYD+DSGRSRGFGFV+FS+E
Sbjct: 30 SFPTPPSNTKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKE 89
Query: 105 ASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
A+ AK+ MDG+ F GRP+R+ +A+ K
Sbjct: 90 VDARSAKDAMDGKAFLGRPLRVSYALEK 117
>gb|EOX93311.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 137
Score = 114 bits (286), Expect = 1e-23
Identities = 53/88 (60%), Positives = 71/88 (80%)
Frame = -1
Query: 285 NTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEE 106
++TR + LFV GL+W+VDEK+L+DAFS++G V+EVRIMYD+D+GRSRGFGFVHFS+E
Sbjct: 34 SSTRPPPNGKLFVAGLSWSVDEKSLKDAFSSFGHVSEVRIMYDKDTGRSRGFGFVHFSKE 93
Query: 105 ASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
A+ AK+ MDG+ GRP+RI A+ K
Sbjct: 94 DEARCAKDAMDGKALLGRPLRISFALEK 121
>ref|XP_004502036.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cicer
arietinum]
Length = 180
Score = 113 bits (282), Expect = 3e-23
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = -1
Query: 267 ASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLA 88
+S LFVGGL+W+VDEK+L+DAFS++G VTEVRI+YD+D+GRSRGFGFV FS E AK A
Sbjct: 77 SSNKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDTGRSRGFGFVIFSNEEHAKSA 136
Query: 87 KEGMDGQEFKGRPIRIDHAIGK 22
K+ MDG+ GRP+RI+ A+ K
Sbjct: 137 KDSMDGKALLGRPLRINFALDK 158
>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 126
Score = 113 bits (282), Expect = 3e-23
Identities = 53/89 (59%), Positives = 70/89 (78%)
Frame = -1
Query: 288 HNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSE 109
HN+ + LFV GL+W+VDEK+L+DAFS++G+V+EVRIMYD+DSGRSRGFGFV+FS+
Sbjct: 16 HNSPSPPPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSK 75
Query: 108 EASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
E A AK+ MDG+ GRP+RI A+ K
Sbjct: 76 ENEAVCAKDAMDGKALLGRPLRISFALEK 104
>ref|XP_006357956.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Solanum tuberosum]
Length = 151
Score = 112 bits (281), Expect = 4e-23
Identities = 52/96 (54%), Positives = 73/96 (76%)
Frame = -1
Query: 309 LLTKSIFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGF 130
LL + +++ + LFV GL+W+VDEK+L DAFS++GQVTEVRIMYD+++GRSRGF
Sbjct: 34 LLPNNKLFSSSSLLPNNKLFVAGLSWSVDEKSLSDAFSSFGQVTEVRIMYDKETGRSRGF 93
Query: 129 GFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
GFV+FS++ A AK+ MDG+ F GRP+R+ A+ K
Sbjct: 94 GFVYFSKDEEASSAKDSMDGKAFLGRPLRVSFALEK 129
>gb|EXB37811.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]
Length = 153
Score = 112 bits (280), Expect = 5e-23
Identities = 51/88 (57%), Positives = 72/88 (81%)
Frame = -1
Query: 285 NTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEE 106
+++ + ++ LFVGGL+W+VDEK+L+DAFS++G+V+EVRI+YD+DSGRSRGFGFVHF +E
Sbjct: 44 SSSSTTSNNKLFVGGLSWSVDEKSLKDAFSSFGEVSEVRILYDKDSGRSRGFGFVHFLKE 103
Query: 105 ASAKLAKEGMDGQEFKGRPIRIDHAIGK 22
A AK+ MDG+ GRP+RI A+ K
Sbjct: 104 EDAVSAKDSMDGKALLGRPLRISFALEK 131
>ref|NP_001130982.1| hypothetical protein [Zea mays] gi|194690622|gb|ACF79395.1| unknown
[Zea mays] gi|413951564|gb|AFW84213.1| hypothetical
protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 112 bits (280), Expect = 5e-23
Identities = 51/78 (65%), Positives = 65/78 (83%)
Frame = -1
Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
LFV GL+W+VDE++L DAFS++G VTEVRIMYD++SGRSRGFGFVHFS + AK AK+ M
Sbjct: 50 LFVAGLSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRGFGFVHFSNDNEAKCAKDAM 109
Query: 75 DGQEFKGRPIRIDHAIGK 22
DG+ GRP+RI A+G+
Sbjct: 110 DGKVMLGRPLRISFALGR 127
>ref|XP_004305987.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 139
Score = 111 bits (278), Expect = 9e-23
Identities = 54/93 (58%), Positives = 73/93 (78%)
Frame = -1
Query: 306 LTKSIFHNTTRSFASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFG 127
L K F +++ S + LFVGGL+W++DEK+L++AFS+YG+VTEV I+YD+DSGRSRGFG
Sbjct: 25 LLKRCFSSSSSS-PNNKLFVGGLSWSLDEKSLKEAFSSYGEVTEVTIVYDKDSGRSRGFG 83
Query: 126 FVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAI 28
FV+FS E AK AK+ MDG+ GRP+RI A+
Sbjct: 84 FVNFSREDDAKSAKDAMDGKALMGRPLRISFAL 116
>ref|XP_006447631.1| hypothetical protein CICLE_v10017091mg [Citrus clementina]
gi|568830698|ref|XP_006469627.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like [Citrus
sinensis] gi|557550242|gb|ESR60871.1| hypothetical
protein CICLE_v10017091mg [Citrus clementina]
Length = 145
Score = 110 bits (274), Expect = 3e-22
Identities = 50/76 (65%), Positives = 64/76 (84%)
Frame = -1
Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
LFV GL+W VDEK+L+DAFS++G+VTEV+I+YD+DSGRSRGFGFVHFS+E A+ AK M
Sbjct: 46 LFVAGLSWTVDEKSLKDAFSSFGEVTEVKIIYDKDSGRSRGFGFVHFSKEDDAESAKHAM 105
Query: 75 DGQEFKGRPIRIDHAI 28
DG+ GRP+RI A+
Sbjct: 106 DGKGLLGRPLRISFAL 121
>ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Glycine max]
Length = 137
Score = 110 bits (274), Expect = 3e-22
Identities = 59/118 (50%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
Frame = -1
Query: 369 RKMASWSRPLLWKQRATCQHLLTKSIFHNTTRSFASPS-LFVGGLAWNVDEKTLEDAFST 193
+K ++ +WK R T+ F+ + S AS + LFVGGL+W+VD K+L++AFS+
Sbjct: 2 KKCVAFLATTIWK-RFHVSPPQTQCRFYCSPPSHASSNKLFVGGLSWSVDHKSLKEAFSS 60
Query: 192 YGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGKS 19
+G VTEV I+YD+DSGRSRGFGFV FS E AK AK+ MDG+ GRP+RI+ A+ K+
Sbjct: 61 FGDVTEVTIVYDKDSGRSRGFGFVIFSNEDDAKCAKDAMDGKALLGRPLRINFALEKA 118
>ref|XP_004243523.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Solanum lycopersicum]
Length = 141
Score = 109 bits (273), Expect = 3e-22
Identities = 49/78 (62%), Positives = 65/78 (83%)
Frame = -1
Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
LFV GL+W+VDEK+L DAFS++GQVTEVRIMYD+++GRSRGFGFV+F ++ A AK+ M
Sbjct: 42 LFVAGLSWSVDEKSLSDAFSSFGQVTEVRIMYDKETGRSRGFGFVYFLKDEEASSAKDSM 101
Query: 75 DGQEFKGRPIRIDHAIGK 22
DG+ F GRP+R+ A+ K
Sbjct: 102 DGKAFLGRPLRVSFALEK 119
>ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative
RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis
thaliana] gi|46359799|gb|AAS88763.1| At3g08000
[Arabidopsis thaliana] gi|332641108|gb|AEE74629.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 143
Score = 109 bits (272), Expect = 4e-22
Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 6/111 (5%)
Frame = -1
Query: 342 LLWKQRATCQHLLTKSIFHNT----TRSFASPS--LFVGGLAWNVDEKTLEDAFSTYGQV 181
L+ + A QH ++ S FH T S ASPS LF+GGL+W+VDE++L+DAFS++G+V
Sbjct: 9 LVRRVSAIPQHSISSS-FHFLPQFCTSSSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEV 67
Query: 180 TEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAI 28
EVRI YD+ SGRSRGFGFV F+EE A AK+ MDG+ GRP+RI A+
Sbjct: 68 AEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRISFAL 118
>ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 141
Score = 108 bits (271), Expect = 6e-22
Identities = 49/82 (59%), Positives = 66/82 (80%)
Frame = -1
Query: 267 ASPSLFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLA 88
++P LFV GL+W+ DE++L DAFS++G VTEVRIMYD++SGRSRGFGFV FS + AK A
Sbjct: 45 SNPKLFVAGLSWSADERSLMDAFSSFGTVTEVRIMYDKNSGRSRGFGFVQFSNDYEAKCA 104
Query: 87 KEGMDGQEFKGRPIRIDHAIGK 22
K+ MDG+ GR ++I +A+GK
Sbjct: 105 KDAMDGKVMLGRSLKISYALGK 126
>ref|XP_004971023.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Setaria italica]
Length = 143
Score = 108 bits (270), Expect = 7e-22
Identities = 50/78 (64%), Positives = 63/78 (80%)
Frame = -1
Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
LFV GL+W+VDE++L DAFST+G VTEVRI+YD++SGR RGFGFVHFS + AK AK+ M
Sbjct: 51 LFVAGLSWSVDERSLTDAFSTFGTVTEVRIIYDKNSGRPRGFGFVHFSNDHEAKCAKDAM 110
Query: 75 DGQEFKGRPIRIDHAIGK 22
DG+ GRP+RI A+ K
Sbjct: 111 DGKVMLGRPLRISFALEK 128
>ref|XP_004971022.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Setaria italica]
Length = 145
Score = 108 bits (270), Expect = 7e-22
Identities = 50/78 (64%), Positives = 63/78 (80%)
Frame = -1
Query: 255 LFVGGLAWNVDEKTLEDAFSTYGQVTEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGM 76
LFV GL+W+VDE++L DAFST+G VTEVRI+YD++SGR RGFGFVHFS + AK AK+ M
Sbjct: 51 LFVAGLSWSVDERSLTDAFSTFGTVTEVRIIYDKNSGRPRGFGFVHFSNDHEAKCAKDAM 110
Query: 75 DGQEFKGRPIRIDHAIGK 22
DG+ GRP+RI A+ K
Sbjct: 111 DGKVMLGRPLRISFALEK 128
>ref|XP_001769839.1| predicted protein [Physcomitrella patens]
gi|162678948|gb|EDQ65401.1| predicted protein
[Physcomitrella patens]
Length = 133
Score = 107 bits (268), Expect = 1e-21
Identities = 56/118 (47%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
Frame = -1
Query: 330 QRATCQHLLTKSIFHNTT----------RSFASPSLFVGGLAWNVDEKTLEDAFSTYGQV 181
+R+ Q +LT S + T R +S LF+GGLAW DE TL DAFS++G V
Sbjct: 12 RRSAAQSVLTASGLGSATVAVPAMLVAQRMMSSSKLFIGGLAWATDENTLRDAFSSFGTV 71
Query: 180 TEVRIMYDRDSGRSRGFGFVHFSEEASAKLAKEGMDGQEFKGRPIRIDHAIGKSPNPR 7
TEV+I+ DRD+GRSRGFGFV+F+ A++A + MDG+E GR IR+D+A K+ R
Sbjct: 72 TEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEMDGRELAGRQIRVDYATDKARETR 129