BLASTX nr result
ID: Ephedra27_contig00026741
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00026741
(545 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi... 89 9e-16
gb|EMJ26349.1| hypothetical protein PRUPE_ppa002505mg [Prunus pe... 77 2e-12
ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containi... 76 6e-12
gb|EOX98059.1| Pentatricopeptide repeat (PPR) superfamily protei... 74 3e-11
gb|EOX98058.1| Pentatricopeptide repeat superfamily protein isof... 74 3e-11
ref|XP_006431883.1| hypothetical protein CICLE_v10000525mg [Citr... 73 4e-11
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,... 72 9e-11
gb|EXB36428.1| hypothetical protein L484_009995 [Morus notabilis] 71 2e-10
gb|EPS61248.1| hypothetical protein M569_13550, partial [Genlise... 67 3e-09
ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006826767.1| hypothetical protein AMTR_s00136p00085920 [A... 66 5e-09
ref|XP_006343483.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006343481.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_002299667.2| hypothetical protein POPTR_0001s21880g [Popu... 64 2e-08
ref|XP_004968981.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
gb|AAB65486.1| membrane-associated salt-inducible protein isolog... 62 7e-08
ref|NP_172560.2| pentatricopeptide repeat-containing protein [Ar... 62 7e-08
ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [S... 62 9e-08
>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 88.6 bits (218), Expect = 9e-16
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = +1
Query: 97 HKRRYRVTANSLPTVEGRVSNAPQKGKNFQKTWINPKKAKPESFGSKEFANELHG--RRH 270
H+ R + +V S+A KN Q + +P+ A ++G +RH
Sbjct: 11 HRHVLRTRLPTPSSVMASASHAVTTIKNNQSNSVAILPKEPQFLPGSSNAKLINGAQKRH 70
Query: 271 FSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEW 450
+ QSAI ++ S L P L R +L+AQ LN+ LR+FG L W ++ QLFEW
Sbjct: 71 SKSYLERQSAIAQVKDCS--ELAPALARYGGLLKAQDLNVILRHFGMLSRWKDLSQLFEW 128
Query: 451 MMEQGKTNAASYTTFITLMGKGHQPQKALE 540
M E GKTN +SY+++I MG+G P KALE
Sbjct: 129 MQETGKTNVSSYSSYIKFMGRGLNPLKALE 158
>gb|EMJ26349.1| hypothetical protein PRUPE_ppa002505mg [Prunus persica]
Length = 664
Score = 77.4 bits (189), Expect = 2e-12
Identities = 42/93 (45%), Positives = 60/93 (64%)
Frame = +1
Query: 262 RRHFSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQL 441
+RH Q QSAI+++Q SS +L L R+ L+ Q LN +R+FG L+ W ++ QL
Sbjct: 65 KRHSKQYLARQSAILEVQESS--DLDSALTRLGGSLKVQDLNAIIRHFGILKRWHDLSQL 122
Query: 442 FEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
FEWM + GK +A+SY+++I MGK P KALE
Sbjct: 123 FEWMQQNGKISASSYSSYIKFMGKSLNPVKALE 155
>ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 642
Score = 75.9 bits (185), Expect = 6e-12
Identities = 42/93 (45%), Positives = 57/93 (61%)
Frame = +1
Query: 262 RRHFSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQL 441
R H Q QSAI+ +Q SS +L L R+ L Q LN +R+FG L+ W ++ QL
Sbjct: 49 RPHSKQYLARQSAILQVQHSS--DLESALTRLGGSLNVQDLNAIIRHFGMLKRWHDLSQL 106
Query: 442 FEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
FEWM + GK +A+SY+++I MGK P KALE
Sbjct: 107 FEWMQQNGKVSASSYSSYIKFMGKSLNPVKALE 139
>gb|EOX98059.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao]
Length = 649
Score = 73.6 bits (179), Expect = 3e-11
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Frame = +1
Query: 46 VCSLCGHSTPLHTFT-PQHKRRYRVTANSLPTVEGRVSNAPQKGKNFQKTWINPKKAKPE 222
+ SL G L T P R+ + S PT +SN P +P
Sbjct: 3 ISSLLGTGFHLQILTFPSPSSFPRIPSLSPPTPRASISNLNSATSTTATPVKEPNPTRP- 61
Query: 223 SFGSKEFANELHGRRHFSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRY 402
H + + + +SA++++Q SS N L+ +L+ Q LN+ +R+
Sbjct: 62 -----------HSKSYLQR----KSALLEVQQSSDLN--SALQNFGGILKPQDLNVIIRH 104
Query: 403 FGRLQWWPEVLQLFEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
FG+L W + +LF WM + GKTN +SY+++I +MGK P KALE
Sbjct: 105 FGKLGKWHHLSELFAWMQQHGKTNGSSYSSYIKIMGKKLSPIKALE 150
>gb|EOX98058.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao]
Length = 717
Score = 73.6 bits (179), Expect = 3e-11
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Frame = +1
Query: 46 VCSLCGHSTPLHTFT-PQHKRRYRVTANSLPTVEGRVSNAPQKGKNFQKTWINPKKAKPE 222
+ SL G L T P R+ + S PT +SN P +P
Sbjct: 3 ISSLLGTGFHLQILTFPSPSSFPRIPSLSPPTPRASISNLNSATSTTATPVKEPNPTRP- 61
Query: 223 SFGSKEFANELHGRRHFSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRY 402
H + + + +SA++++Q SS N L+ +L+ Q LN+ +R+
Sbjct: 62 -----------HSKSYLQR----KSALLEVQQSSDLN--SALQNFGGILKPQDLNVIIRH 104
Query: 403 FGRLQWWPEVLQLFEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
FG+L W + +LF WM + GKTN +SY+++I +MGK P KALE
Sbjct: 105 FGKLGKWHHLSELFAWMQQHGKTNGSSYSSYIKIMGKKLSPIKALE 150
>ref|XP_006431883.1| hypothetical protein CICLE_v10000525mg [Citrus clementina]
gi|557534005|gb|ESR45123.1| hypothetical protein
CICLE_v10000525mg [Citrus clementina]
Length = 660
Score = 73.2 bits (178), Expect = 4e-11
Identities = 41/94 (43%), Positives = 60/94 (63%)
Frame = +1
Query: 259 GRRHFSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQ 438
G+R S +SAI+++Q SS +L +LER+ +L+ LN LR+FG L +VLQ
Sbjct: 64 GKRQSSSYLARKSAILEVQQSS--DLTSSLERLGGILKVPDLNAILRHFGDLGRGRDVLQ 121
Query: 439 LFEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
LFEWM + GKT+ +SY+++I +GK KALE
Sbjct: 122 LFEWMQQHGKTSISSYSSYIKFLGKSGNSLKALE 155
>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product
[Vitis vinifera]
Length = 659
Score = 73.2 bits (178), Expect = 4e-11
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Frame = +1
Query: 130 LPTVEGRVSNAPQ--KGKNFQKTWINPKKAKPESFGSKEFANELHGRRHFSQSPKVQSAI 303
LP++ S P + K+ T P K + R H QSAI
Sbjct: 20 LPSLSSPASPLPSTTRAKSSHLTSATPPLHKESQIEPTHVSVTPRKRCHSVGYKARQSAI 79
Query: 304 VDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEWMMEQGKTNAAS 483
+++Q SS +L L R+ ++L+ Q LN+ LR+FG+L W ++ QLF+WM + K +S
Sbjct: 80 LEVQQSS--DLGSALARLGDMLKVQDLNVILRHFGKLCRWQDLSQLFDWMQKHEKITFSS 137
Query: 484 YTTFITLMGKGHQPQKALE 540
Y+T+I MGK P KALE
Sbjct: 138 YSTYIKFMGKSLNPIKALE 156
>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 672
Score = 72.0 bits (175), Expect = 9e-11
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Frame = +1
Query: 61 GHSTPLHTFTPQHKRRYRVTANSLPTVEGRVSNAPQKGKNFQKTWINPKKAKPESFGSKE 240
GH +FTP + R ++ N T+ R +N+ + + +++
Sbjct: 11 GHHIFTRSFTPNNSRT--ISGNPPKTIS-RANNSQRSSAVLSTNTTTETPLLKQPHNNEQ 67
Query: 241 FAN-ELHGRRHFSQSPKV-QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRL 414
N + H +R S+S Q+AI+++Q S +L L R+ +L+AQ LN+ LR G+
Sbjct: 68 PPNGQFHVQRRHSKSYLARQAAILEVQQSP--DLDSALRRLGAILKAQDLNVILRNLGKQ 125
Query: 415 QWWPEVLQLFEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
W ++ +LF+WM + K + +SYT+++ MGK P KALE
Sbjct: 126 SRWQDLSKLFDWMQQHSKISVSSYTSYMKFMGKSLNPAKALE 167
>gb|EXB36428.1| hypothetical protein L484_009995 [Morus notabilis]
Length = 744
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/106 (36%), Positives = 61/106 (57%)
Frame = +1
Query: 223 SFGSKEFANELHGRRHFSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRY 402
+F + E A +RH QSAI ++Q SS L R+ VL+ Q LN LR+
Sbjct: 48 TFVNGEVAATQTQKRHSKSYLARQSAIREVQQSSDCR--SALSRLEGVLKVQDLNAILRH 105
Query: 403 FGRLQWWPEVLQLFEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
FG + W ++ Q+F+WM + GK +A+SY+++I +G+ P +ALE
Sbjct: 106 FGTRKRWHDLSQIFDWMQQNGKISASSYSSYIKFLGESLNPMEALE 151
>gb|EPS61248.1| hypothetical protein M569_13550, partial [Genlisea aurea]
Length = 238
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +1
Query: 298 AIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEWMMEQGKTNA 477
++ D+Q SS +L L R L+AQ LN+ LR+FG L ++ QLF+WM + KTN
Sbjct: 4 SVRDIQESS--DLASALVRSGNTLRAQDLNVILRHFGNLNRLKDLCQLFDWMKQNEKTNF 61
Query: 478 ASYTTFITLMGKGHQPQKALE 540
ASY+++I +GKG KALE
Sbjct: 62 ASYSSYIKFIGKGSNSLKALE 82
>ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Solanum lycopersicum]
Length = 642
Score = 67.0 bits (162), Expect = 3e-09
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +1
Query: 292 QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEWMMEQGKT 471
QS I+ +Q SS +L L R + L+ Q +N+ LRYFG+L PE+ Q+FEWM + K
Sbjct: 63 QSTILHIQDSS--DLASALARHGDTLKVQDMNVILRYFGKLNRRPELCQVFEWMQQNQKI 120
Query: 472 NAASYTTFITLMGKGHQPQKALE 540
N ASY++++ MGK A+E
Sbjct: 121 NVASYSSYVKFMGKSLSCVDAVE 143
>ref|XP_006826767.1| hypothetical protein AMTR_s00136p00085920 [Amborella trichopoda]
gi|548831187|gb|ERM94004.1| hypothetical protein
AMTR_s00136p00085920 [Amborella trichopoda]
Length = 690
Score = 66.2 bits (160), Expect = 5e-09
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +1
Query: 292 QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEWMMEQGKT 471
++AI ++Q +S +L L R+ LQ Q LN+ LR FG+ W E+ QLF WM + GK
Sbjct: 103 RAAITEIQGAS--DLGSALSRLGGKLQLQDLNIILRNFGKSNKWREISQLFNWMQKLGKV 160
Query: 472 NAASYTTFITLMGKGHQPQKALE 540
N +SY++FI MG+ KAL+
Sbjct: 161 NISSYSSFIKYMGRSGNTVKALQ 183
>ref|XP_006343483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X3 [Solanum tuberosum]
Length = 646
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +1
Query: 292 QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEWMMEQGKT 471
QSAI+ +Q SS +L L R + L+ Q +N+ LRYFG+L E+ Q FEWM + K
Sbjct: 63 QSAILHIQDSS--DLASALARHGDTLKVQDMNVILRYFGKLSRRRELYQAFEWMQQNQKI 120
Query: 472 NAASYTTFITLMGKGHQPQKALE 540
N ASY++++ MGK A+E
Sbjct: 121 NVASYSSYVKFMGKSLSCVDAVE 143
>ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 651
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +1
Query: 292 QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEWMMEQGKT 471
QSAI+ +Q SS +L L R + L+ Q +N+ LRYFG+L E+ Q FEWM + K
Sbjct: 63 QSAILHIQDSS--DLASALARHGDTLKVQDMNVILRYFGKLSRRRELYQAFEWMQQNQKI 120
Query: 472 NAASYTTFITLMGKGHQPQKALE 540
N ASY++++ MGK A+E
Sbjct: 121 NVASYSSYVKFMGKSLSCVDAVE 143
>ref|XP_006343481.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 652
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +1
Query: 292 QSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEWMMEQGKT 471
QSAI+ +Q SS +L L R + L+ Q +N+ LRYFG+L E+ Q FEWM + K
Sbjct: 63 QSAILHIQDSS--DLASALARHGDTLKVQDMNVILRYFGKLSRRRELYQAFEWMQQNQKI 120
Query: 472 NAASYTTFITLMGKGHQPQKALE 540
N ASY++++ MGK A+E
Sbjct: 121 NVASYSSYVKFMGKSLSCVDAVE 143
>ref|XP_002299667.2| hypothetical protein POPTR_0001s21880g [Populus trichocarpa]
gi|550347847|gb|EEE84472.2| hypothetical protein
POPTR_0001s21880g [Populus trichocarpa]
Length = 673
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +1
Query: 262 RRHFSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQL 441
RR ++AI+++Q S +L L+R+ +L+ Q LN+ LR FG W ++ QL
Sbjct: 80 RRQSKSYMSRKAAILEVQQSP--HLDSALQRLGGMLKVQDLNIILRNFGEQCRWQDLSQL 137
Query: 442 FEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
F+WM K +A+SY+++I MG P KALE
Sbjct: 138 FDWMQRHNKISASSYSSYIKFMGTSLNPAKALE 170
>ref|XP_004968981.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like isoform X1 [Setaria italica]
Length = 645
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +1
Query: 280 SPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEWMME 459
SP+ +SA+ ++++SS + L R +VLQ Q N+ LR+ G + W ++ ++FEWM E
Sbjct: 55 SPR-RSAVAEVKASSDP--VAALNRFEDVLQTQDCNIILRHCGDTRRWDDLSKVFEWMQE 111
Query: 460 QGKTNAASYTTFITLMGKGHQPQKALE 540
+ TNAASY+++ +G P +AL+
Sbjct: 112 REMTNAASYSSYFKYLGLSRDPARALQ 138
>gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
[Arabidopsis thaliana]
Length = 652
Score = 62.4 bits (150), Expect = 7e-08
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = +1
Query: 262 RRHFSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQL 441
+RH + +SAI ++Q SS + L +L+R+ VL+ Q LN+ LR FG W +++QL
Sbjct: 63 KRHSNSYLARKSAISEVQRSS--DFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQL 120
Query: 442 FEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
FEWM + GK + ++Y++ I +G KALE
Sbjct: 121 FEWMQQHGKISVSTYSSCIKFVG-AKNVSKALE 152
>ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated
salt-inducible protein isolog [Arabidopsis thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 62.4 bits (150), Expect = 7e-08
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = +1
Query: 262 RRHFSQSPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQL 441
+RH + +SAI ++Q SS + L +L+R+ VL+ Q LN+ LR FG W +++QL
Sbjct: 63 KRHSNSYLARKSAISEVQRSS--DFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQL 120
Query: 442 FEWMMEQGKTNAASYTTFITLMGKGHQPQKALE 540
FEWM + GK + ++Y++ I +G KALE
Sbjct: 121 FEWMQQHGKISVSTYSSCIKFVG-AKNVSKALE 152
>ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein
SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 62.0 bits (149), Expect = 9e-08
Identities = 31/87 (35%), Positives = 53/87 (60%)
Frame = +1
Query: 280 SPKVQSAIVDLQSSSPTNLLPTLERVREVLQAQHLNLTLRYFGRLQWWPEVLQLFEWMME 459
SP+ +SA+ +++ + + L R EVLQ Q N+ LR+ G + W ++ ++FEWM E
Sbjct: 52 SPR-RSAVAEVKGAPDP--IAALNRFEEVLQTQDCNIILRHCGDTRRWDDLSKVFEWMQE 108
Query: 460 QGKTNAASYTTFITLMGKGHQPQKALE 540
+ TNAASY+++ +G P +AL+
Sbjct: 109 REMTNAASYSSYFKYLGLSRDPARALQ 135