BLASTX nr result

ID: Ephedra27_contig00026732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026732
         (523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006840317.1| hypothetical protein AMTR_s00045p00081020 [A...    60   3e-07

>ref|XP_006840317.1| hypothetical protein AMTR_s00045p00081020 [Amborella trichopoda]
           gi|548842035|gb|ERN01992.1| hypothetical protein
           AMTR_s00045p00081020 [Amborella trichopoda]
          Length = 564

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
 Frame = -3

Query: 407 WVDRSLCFRGRKSVSEVPTIFQKANQVGRQT--KNSRKKNHGPKYSDKMSKVLPADFVKE 234
           W++RSLC RGRKS+     +      VG Q   +  +KK+     ++KM +  P D+VK+
Sbjct: 65  WINRSLCARGRKSM-----VVSGVANVGVQPIREEGKKKSRPAVRNNKMVQPSP-DYVKK 118

Query: 233 QVNYFQEVDSFELDEEDISFQQPGKDFNGRWQ-----------SQGNTSDIFALRKMRLS 87
            V+YF+EVD+F LDEE  S         GRWQ             G TS +  +  +RLS
Sbjct: 119 WVSYFEEVDAFTLDEESAS-----PKVRGRWQRNSELPQFGLKGNGETSMLSIVEGLRLS 173

Query: 86  GV---IDE 72
            +   IDE
Sbjct: 174 WIARAIDE 181


Top