BLASTX nr result

ID: Ephedra27_contig00026714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026714
         (1088 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345699.1| PREDICTED: SAP domain-containing ribonucleop...    58   8e-06
ref|XP_004246720.1| PREDICTED: uncharacterized protein LOC101264...    57   1e-05

>ref|XP_006345699.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Solanum
           tuberosum]
          Length = 198

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
 Frame = +1

Query: 334 AEKFGVSLKLSEEEKRTLRSARFG-----GSMATSKGDXXXXXXXXXXXXXXFGLSKSSS 498
           AE+FG++++LSEEEKR  R+ RFG     GS A+ K +              FGLS+S+S
Sbjct: 77  AERFGMTVQLSEEEKRNTRAERFGTSAPQGSDASKKAE----EQKRKARAERFGLSQSNS 132

Query: 499 LDEXXXXXXXXXXFGLKS-----EEEKKQERALRFRRQAARDIAKENNRPKT 639
            DE          F   +     EE+K++ RALRF +  +   ++EN + KT
Sbjct: 133 TDEEAKKKARLARFAPPAKADPVEEDKRKARALRFSQSQSGSQSQENGKEKT 184


>ref|XP_004246720.1| PREDICTED: uncharacterized protein LOC101264966 [Solanum
           lycopersicum]
          Length = 200

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
 Frame = +1

Query: 334 AEKFGVSLKLSEEEKRTLRSARFG-----GSMATSKGDXXXXXXXXXXXXXXFGLSKSSS 498
           AE+FG++++LSEEEKR  R+ RFG     GS A+ K +              FGLS+S S
Sbjct: 79  AERFGMTVQLSEEEKRNTRAERFGTSAPQGSDASKKAE----EQKRKARAERFGLSQSDS 134

Query: 499 LDEXXXXXXXXXXFGLKS-----EEEKKQERALRFRRQAARDIAKENNRPKT 639
            DE          F   +     EE+K++ RALRF +  +   ++EN + KT
Sbjct: 135 TDEDAKKKARLARFAPPAKADPVEEDKRKARALRFSQSKSGSQSQENGKEKT 186


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