BLASTX nr result

ID: Ephedra27_contig00026670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026670
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]    57   5e-06
emb|CAN72675.1| hypothetical protein VITISV_020405 [Vitis vinifera]    56   8e-06

>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
          Length = 1291

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
 Frame = -1

Query: 577 KILDLQKQIEDQGKNLLDIDLIHYTLKALPFKFADFISKFDN--DDQDITYDEFCNKLQI 404
           +++D+  Q+   G+   D  ++   + ++P KF   IS  +   D Q +T  E  +KL  
Sbjct: 138 RLMDVVNQMRLLGEAFTDQKVVEKIMVSVPQKFEAKISAIEESCDLQTLTIVELTSKLHA 197

Query: 403 VESKLTLRNYSPDQFDVMVAHK------------YPNKR-------RKPTF--CKHCKKD 287
            E ++ +R     +      HK            + N R       RK  F  C HCK+ 
Sbjct: 198 QEQRVLMRGDEATEGAFQANHKGKNSGNLQGKKFFKNSRGKAEGSSRKGKFLPCSHCKRT 257

Query: 286 GFHNPKNYWNDPN---NPNATDLKEKAKKRMRNRNKEANIVEIMNPNSVALITEQVNNYN 116
             H  K+ W+      N N  +    ++K  R + K++       P   A +TE+  N +
Sbjct: 258 N-HAEKDCWHKGKPLFNCNFCNKLGHSEKYCRAKKKQSQ----QQPEQHASVTEEDKNDD 312

Query: 115 KHIPEANLCVDDN-CDIWYLNSGCSSHMIGNESILINI 5
           +H+  A+  +  +  + W ++SGC+SHM  + SI  +I
Sbjct: 313 EHLFMASQALSSHELNTWLIDSGCTSHMTKHLSIFTSI 350


>emb|CAN72675.1| hypothetical protein VITISV_020405 [Vitis vinifera]
          Length = 1919

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 29/227 (12%)
 Frame = -1

Query: 598  LTAKLIRKILDLQ--KQIEDQGKNLLDIDLIHYTLKALPFKFADFISKFDN--DDQDITY 431
            L   +  KI++L+  K +    K   D  ++   + ++P KF   IS  +   D Q +T 
Sbjct: 590  LVDHIFTKIMNLETLKLVGTXSKAFTDQKVVEKIMVSVPQKFEAKISAIEESCDLQTLTI 649

Query: 430  DEFCNKLQIVESKLTLRNYSPDQFDVMVAHKYPNKR-------------------RKPTF 308
             E  +KL   E ++ +R     +      HK  N R                   RK  F
Sbjct: 650  VELTSKLHAQEQRVLMRGDEATEAAFQANHKGKNSRNLQGKKFFKNNKRKXEGSSRKGXF 709

Query: 307  --CKHCKKDGFHNPKNYWNDPN---NPNATDLKEKAKKRMRNRNKEANIVEIMNPNSVAL 143
              C HC++   H  K+ W       N N  +    ++K  R + K++       P   A 
Sbjct: 710  XSCSHCRRTN-HAEKDCWQKXKPLFNCNFCNKLGHSEKHCRAKKKQSQ----QQPEQNAS 764

Query: 142  ITEQVNNYNKHIPEANLCVDDN-CDIWYLNSGCSSHMIGNESILINI 5
            +TE+  N ++H+  A+  +  +  + W ++SGC+SHM    SI  +I
Sbjct: 765  VTEEDKNDDEHLFMASQALSSHELNTWLIDSGCTSHMTKYLSIFXSI 811


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