BLASTX nr result
ID: Ephedra27_contig00026669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00026669
(520 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006464722.1| PREDICTED: probable E3 ubiquitin-protein lig... 80 2e-13
ref|XP_006464721.1| PREDICTED: probable E3 ubiquitin-protein lig... 80 2e-13
ref|XP_006451921.1| hypothetical protein CICLE_v10008120mg [Citr... 80 2e-13
ref|XP_006451920.1| hypothetical protein CICLE_v10008120mg [Citr... 80 2e-13
ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein lig... 80 2e-13
gb|ACU23737.1| unknown [Glycine max] 80 2e-13
ref|XP_006592905.1| PREDICTED: probable E3 ubiquitin-protein lig... 78 1e-12
ref|XP_006592904.1| PREDICTED: probable E3 ubiquitin-protein lig... 78 1e-12
ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein lig... 78 1e-12
gb|ESW21593.1| hypothetical protein PHAVU_005G083200g [Phaseolus... 78 1e-12
gb|ESW21592.1| hypothetical protein PHAVU_005G083200g [Phaseolus... 77 2e-12
ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group] g... 77 3e-12
ref|XP_004487688.1| PREDICTED: probable E3 ubiquitin-protein lig... 77 3e-12
ref|NP_001168691.1| putative regulator of chromosome condensatio... 77 3e-12
gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japo... 77 3e-12
gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indi... 77 3e-12
ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 76 4e-12
gb|EMJ13050.1| hypothetical protein PRUPE_ppa004744mg [Prunus pe... 76 5e-12
ref|XP_002316910.2| regulator of chromosome condensation family ... 75 7e-12
ref|XP_002329104.1| predicted protein [Populus trichocarpa] gi|5... 75 1e-11
>ref|XP_006464722.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
X2 [Citrus sinensis]
Length = 488
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 VLQIAAGVSYYGSHSGWLIVFIW-LWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+QIAAG SY + +G +V+ + CLGHG+ DEL PRA+Q FRRK IH++RV A
Sbjct: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
Query: 180 GDEHSVALDSNGY 218
GDEH VALDS+GY
Sbjct: 331 GDEHVVALDSSGY 343
>ref|XP_006464721.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
X1 [Citrus sinensis]
Length = 489
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 VLQIAAGVSYYGSHSGWLIVFIW-LWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+QIAAG SY + +G +V+ + CLGHG+ DEL PRA+Q FRRK IH++RV A
Sbjct: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
Query: 180 GDEHSVALDSNGY 218
GDEH VALDS+GY
Sbjct: 332 GDEHVVALDSSGY 344
>ref|XP_006451921.1| hypothetical protein CICLE_v10008120mg [Citrus clementina]
gi|557555147|gb|ESR65161.1| hypothetical protein
CICLE_v10008120mg [Citrus clementina]
Length = 489
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 VLQIAAGVSYYGSHSGWLIVFIW-LWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+QIAAG SY + +G +V+ + CLGHG+ DEL PRA+Q FRRK IH++RV A
Sbjct: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
Query: 180 GDEHSVALDSNGY 218
GDEH VALDS+GY
Sbjct: 332 GDEHVVALDSSGY 344
>ref|XP_006451920.1| hypothetical protein CICLE_v10008120mg [Citrus clementina]
gi|557555146|gb|ESR65160.1| hypothetical protein
CICLE_v10008120mg [Citrus clementina]
Length = 390
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 VLQIAAGVSYYGSHSGWLIVFIW-LWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+QIAAG SY + +G +V+ + CLGHG+ DEL PRA+Q FRRK IH++RV A
Sbjct: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
Query: 180 GDEHSVALDSNGY 218
GDEH VALDS+GY
Sbjct: 332 GDEHVVALDSSGY 344
>ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 485
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/74 (60%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +3
Query: 3 VLQIAAGVSYYGS--HSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVL 176
V+QIAAG SY S +G + F CLGHG+ DEL PRA+Q FRRK IHI+RV
Sbjct: 268 VVQIAAGPSYILSVTENGTVYSF-GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVS 326
Query: 177 AGDEHSVALDSNGY 218
AGDEH+VALDSNGY
Sbjct: 327 AGDEHAVALDSNGY 340
>gb|ACU23737.1| unknown [Glycine max]
Length = 485
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/74 (60%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +3
Query: 3 VLQIAAGVSYYGS--HSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVL 176
V+QIAAG SY S +G + F CLGHG+ DEL PRA+Q FRRK IHI+RV
Sbjct: 268 VVQIAAGPSYILSVTENGTVYSF-GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVS 326
Query: 177 AGDEHSVALDSNGY 218
AGDEH+VALDSNGY
Sbjct: 327 AGDEHAVALDSNGY 340
>ref|XP_006592905.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
X3 [Glycine max]
Length = 372
Score = 78.2 bits (191), Expect = 1e-12
Identities = 49/96 (51%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 VLQIAAGVSYYGS--HSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVL 176
V+QIAAG SY S +G + F CLGHG+ DEL PR +Q FRRK IHI+RV
Sbjct: 155 VVQIAAGPSYILSVTENGTVYSF-GSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVS 213
Query: 177 AGDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
AGDEH+VALDSNG FV T + YC L
Sbjct: 214 AGDEHAVALDSNG----------FVYTWGKGYCGAL 239
>ref|XP_006592904.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
X2 [Glycine max]
Length = 415
Score = 78.2 bits (191), Expect = 1e-12
Identities = 49/96 (51%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 VLQIAAGVSYYGS--HSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVL 176
V+QIAAG SY S +G + F CLGHG+ DEL PR +Q FRRK IHI+RV
Sbjct: 198 VVQIAAGPSYILSVTENGTVYSF-GSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVS 256
Query: 177 AGDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
AGDEH+VALDSNG FV T + YC L
Sbjct: 257 AGDEHAVALDSNG----------FVYTWGKGYCGAL 282
>ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
X1 [Glycine max]
Length = 485
Score = 78.2 bits (191), Expect = 1e-12
Identities = 49/96 (51%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 VLQIAAGVSYYGS--HSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVL 176
V+QIAAG SY S +G + F CLGHG+ DEL PR +Q FRRK IHI+RV
Sbjct: 268 VVQIAAGPSYILSVTENGTVYSF-GSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVS 326
Query: 177 AGDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
AGDEH+VALDSNG FV T + YC L
Sbjct: 327 AGDEHAVALDSNG----------FVYTWGKGYCGAL 352
>gb|ESW21593.1| hypothetical protein PHAVU_005G083200g [Phaseolus vulgaris]
Length = 364
Score = 77.8 bits (190), Expect = 1e-12
Identities = 47/87 (54%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 VLQIAAGVSYYGS--HSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVL 176
V+QIAAG SY S +G + F CLGHG+ +E PRAVQ FRRK IHI+RV
Sbjct: 268 VVQIAAGPSYILSVTENGTVYSF-GSGANFCLGHGEQHNEFQPRAVQKFRRKGIHIVRVS 326
Query: 177 AGDEHSVALDSNGYA--IVAAFFPLFV 251
AGDEH+VALDSNG+ I FP F+
Sbjct: 327 AGDEHAVALDSNGFVSFIGQDIFPSFI 353
>gb|ESW21592.1| hypothetical protein PHAVU_005G083200g [Phaseolus vulgaris]
Length = 478
Score = 77.0 bits (188), Expect = 2e-12
Identities = 49/96 (51%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 VLQIAAGVSYYGS--HSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVL 176
V+QIAAG SY S +G + F CLGHG+ +E PRAVQ FRRK IHI+RV
Sbjct: 268 VVQIAAGPSYILSVTENGTVYSF-GSGANFCLGHGEQHNEFQPRAVQKFRRKGIHIVRVS 326
Query: 177 AGDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
AGDEH+VALDSNG FV T + YC L
Sbjct: 327 AGDEHAVALDSNG----------FVYTWGKGYCGAL 352
>ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
gi|28564665|dbj|BAC57847.1| putative UVB-resistance
protein UVR8 [Oryza sativa Japonica Group]
gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa
Japonica Group] gi|215678781|dbj|BAG95218.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 484
Score = 76.6 bits (187), Expect = 3e-12
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 VLQIAAGVSY-YGSHSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+Q+AAG SY + + CLGHGD DEL PRA+Q F+R++IH++RV A
Sbjct: 263 VVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSA 322
Query: 180 GDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
GDEH+VALD+ GY V T R YC L
Sbjct: 323 GDEHAVALDALGY----------VYTWGRGYCGAL 347
>ref|XP_004487688.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cicer
arietinum]
Length = 492
Score = 76.6 bits (187), Expect = 3e-12
Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 VLQIAAGVSYYGS--HSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVL 176
V+Q+AAG ++ S G + F CLGHG+ DELLPR++Q FRRK+IH++RV
Sbjct: 272 VVQVAAGPNFILSVTQDGGVYSF-GSGSNFCLGHGEQHDELLPRSIQKFRRKNIHVVRVS 330
Query: 177 AGDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
+GDEH+VALDSNG FV T + YC L
Sbjct: 331 SGDEHAVALDSNG----------FVYTWGKGYCGAL 356
>ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays] gi|223950263|gb|ACN29215.1| unknown [Zea
mays] gi|414884497|tpg|DAA60511.1| TPA: putative
regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 483
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 VLQIAAGVSY-YGSHSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+QIAAG SY + + CLGHGD DELLPRA+Q F+R++IH++RV A
Sbjct: 262 VVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSA 321
Query: 180 GDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
GDEH+VALD+ G+ V T R YC L
Sbjct: 322 GDEHAVALDALGH----------VYTWGRGYCGAL 346
>gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
Length = 484
Score = 76.6 bits (187), Expect = 3e-12
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 VLQIAAGVSY-YGSHSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+Q+AAG SY + + CLGHGD DEL PRA+Q F+R++IH++RV A
Sbjct: 263 VVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSA 322
Query: 180 GDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
GDEH+VALD+ GY V T R YC L
Sbjct: 323 GDEHAVALDALGY----------VYTWGRGYCGAL 347
>gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
Length = 907
Score = 76.6 bits (187), Expect = 3e-12
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 VLQIAAGVSY-YGSHSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+Q+AAG SY + + CLGHGD DEL PRA+Q F+R++IH++RV A
Sbjct: 263 VVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSA 322
Query: 180 GDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
GDEH+VALD+ GY V T R YC L
Sbjct: 323 GDEHAVALDALGY----------VYTWGRGYCGAL 347
>ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 485
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 VLQIAAGVSY-YGSHSGWLIVFIWLWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+Q+AAG SY + + CLGHGD +ELLPRA+Q F+R++IH++RV A
Sbjct: 262 VVQVAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSA 321
Query: 180 GDEHSVALDSNGYAIVAAFFPLFVPT*NRWYCSLL 284
GDEH+VALD+ GY V T R YC L
Sbjct: 322 GDEHAVALDALGY----------VYTWGRGYCGAL 346
>gb|EMJ13050.1| hypothetical protein PRUPE_ppa004744mg [Prunus persica]
Length = 493
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 VLQIAAGVSYYGSHSGWLIVFIW-LWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
++QIAAG SY + + +V+ + CLGHG+ DE PRA+Q F+RK IH++RV A
Sbjct: 272 IVQIAAGPSYVLAVADNGVVYSFGSGSHFCLGHGEQHDEFQPRAIQTFKRKGIHVVRVSA 331
Query: 180 GDEHSVALDSNGY 218
GDEH+VALDS+GY
Sbjct: 332 GDEHAVALDSSGY 344
>ref|XP_002316910.2| regulator of chromosome condensation family protein [Populus
trichocarpa] gi|550328218|gb|EEE97522.2| regulator of
chromosome condensation family protein [Populus
trichocarpa]
Length = 492
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 VLQIAAGVSYYGSHSGWLIVFIW-LWFELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+QIAAG SY + + +V+ + LCLGHG+ DE PRA+Q FRRK IH++ V A
Sbjct: 271 VVQIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSA 330
Query: 180 GDEHSVALDSNGY 218
GDEH+VALDS+G+
Sbjct: 331 GDEHAVALDSSGF 343
>ref|XP_002329104.1| predicted protein [Populus trichocarpa]
gi|566154070|ref|XP_006370290.1| regulator of chromosome
condensation family protein [Populus trichocarpa]
gi|550349469|gb|ERP66859.1| regulator of chromosome
condensation family protein [Populus trichocarpa]
Length = 492
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 VLQIAAGVSYYGSHSGWLIVFIWLW-FELCLGHGDPPDELLPRAVQLFRRKSIHIIRVLA 179
V+QIAAG SY + + +V+ + + CLGHG+ DE PRA+Q FRRK IH++ V A
Sbjct: 271 VVQIAAGPSYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSA 330
Query: 180 GDEHSVALDSNGY 218
GDEH+VALDS+G+
Sbjct: 331 GDEHAVALDSSGF 343