BLASTX nr result

ID: Ephedra27_contig00026594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026594
         (670 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
gb|EMJ13096.1| hypothetical protein PRUPE_ppa010317mg [Prunus pe...    60   8e-07

>ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449471407|ref|XP_004153300.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449474047|ref|XP_004154059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449503375|ref|XP_004161971.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 258

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 7/196 (3%)
 Frame = -1

Query: 667 LLKRLCLRGHMETAGELVSTCLVVGMPYEGIDLSLFVGKMRRQRKKTVT-NFLCRIKNGN 491
           LL RLCL  H+ TA  L+   L+       + LS+    +  Q    +T + L R+K+  
Sbjct: 66  LLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKH-- 123

Query: 490 YEGAESVCRNVYKRLIEEYSKHFQLVRARFLLRTM--PGC----NETVYANVIEYCCKAG 329
           +  A      +   LI  Y K  +   A  L   M  PG      E VY  +I    + G
Sbjct: 124 HPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKG 183

Query: 328 NLYLALQMVSSILSRTSLVPGPGIRVVLFKSLLKDARIKEAYRLHDCFEILDKVHSPFYR 149
             + AL+++ +++  ++LVP   +R  +F+SLLK+A I EA   +D    +   ++  + 
Sbjct: 184 MTFDALKVLRNMID-SNLVPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHL 242

Query: 148 CKVFRFICRVLKDWKD 101
            +V   + R++ +W D
Sbjct: 243 RRVSELLNRIITNWID 258


>gb|EMJ13096.1| hypothetical protein PRUPE_ppa010317mg [Prunus persica]
          Length = 254

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
 Frame = -1

Query: 667 LLKRLCLRGHMETAGELVSTCLVVGMPYEGIDLSLFVGKMRRQRKKT-VTNFLCRIKNGN 491
           LL RLCL  H++TA  L  T L+   P + + LS+ +     Q       + L R+++  
Sbjct: 59  LLPRLCLLNHLDTATHLTITALLTNPPLKSLSLSILIHSFTSQPDMARPMSLLTRLRHN- 117

Query: 490 YEGAESVCRNVYKRLIEEYSKHFQ----LVRARFLLRTMPGC--NETVYANVIEYCCKAG 329
              +      +    I  Y K  +    L    +L+R    C  +E V   ++   CK G
Sbjct: 118 -PPSHPYLTPITTMFIASYFKKNKPKEALKMFNWLVRPGSPCVLDERVCEVLVNGFCKNG 176

Query: 328 NLYLALQMVSSILSRTSLVPGPGIRVVLFKSLLKDARIKEAYRLHDCFEIL-DKVHSPFY 152
            +  AL+++ ++LS T++VPG  ++  ++K LL++ARIKEA  L++    + D+      
Sbjct: 177 MVLEALKVLRAMLS-TNIVPGCDLKKWVYKVLLREARIKEAVELNEALGCVGDREKGDES 235

Query: 151 RC--KVFRFICRVLKDWKD 101
            C  KV   +  ++ +W +
Sbjct: 236 ECVKKVLALLDHMIGNWAE 254


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