BLASTX nr result

ID: Ephedra27_contig00026579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026579
         (440 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850873.1| hypothetical protein AMTR_s00025p00149340 [A...    83   3e-14
ref|XP_002960608.1| hypothetical protein SELMODRAFT_402996 [Sela...    55   1e-05
ref|XP_002969251.1| hypothetical protein SELMODRAFT_410197 [Sela...    55   1e-05

>ref|XP_006850873.1| hypothetical protein AMTR_s00025p00149340 [Amborella trichopoda]
           gi|548854544|gb|ERN12454.1| hypothetical protein
           AMTR_s00025p00149340 [Amborella trichopoda]
          Length = 547

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/64 (56%), Positives = 47/64 (73%)
 Frame = -2

Query: 400 GGDKRSWVKSKNWLKTLDVQSVVKWFDARKKRTRLGDHFATSIEYVLRYSPFVQVKELLV 221
           GG   +W  S+ WL+ LDVQ +V WF +RKK TRLGDHFA  IEY LR+SP V++  L++
Sbjct: 3   GGSSENWELSEAWLQELDVQHLVDWFGSRKKNTRLGDHFAACIEYTLRFSPAVKLSNLII 62

Query: 220 SQQV 209
           SQQ+
Sbjct: 63  SQQI 66


>ref|XP_002960608.1| hypothetical protein SELMODRAFT_402996 [Selaginella moellendorffii]
           gi|300171547|gb|EFJ38147.1| hypothetical protein
           SELMODRAFT_402996 [Selaginella moellendorffii]
          Length = 465

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
 Frame = -2

Query: 439 NSKELPVASDSSLGGDKRSWVKSKNWLKTLDVQSVVKWFDARKK--RTRLG------DHF 284
           +S ELP+AS S L GD  +      W++ LD      WF +RK    TRLG      DHF
Sbjct: 49  DSDELPIASISGLIGDCAA-----GWIEELDPGHARDWFLSRKSSSNTRLGTLKVDGDHF 103

Query: 283 ATSIEYVLRYSPFVQVKELLVSQQVMQ 203
           A  +E+VLR++P   +  +  SQQV++
Sbjct: 104 AKCVEFVLRFAPLEGIDSIFYSQQVLE 130


>ref|XP_002969251.1| hypothetical protein SELMODRAFT_410197 [Selaginella moellendorffii]
           gi|300162727|gb|EFJ29339.1| hypothetical protein
           SELMODRAFT_410197 [Selaginella moellendorffii]
          Length = 414

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
 Frame = -2

Query: 439 NSKELPVASDSSLGGDKRSWVKSKNWLKTLDVQSVVKWFDARKK--RTRLG------DHF 284
           +S ELP+AS S L GD  +      W++ LD      WF +RK    TRLG      DHF
Sbjct: 34  DSDELPIASISGLIGDCAA-----GWIEELDPGHARDWFLSRKSSSNTRLGTLKVDGDHF 88

Query: 283 ATSIEYVLRYSPFVQVKELLVSQQVMQ 203
           A  +E+VLR++P   +  +  SQQV++
Sbjct: 89  AKCVEFVLRFAPLEGIDSIFYSQQVLE 115


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