BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026539
         (429 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37296.3| unnamed protein product [Vitis vinifera]               65   7e-09
gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium ...    65   9e-09
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]    61   1e-07
pir||E84492 probable retroelement pol polyprotein [imported] - A...    59   7e-07
gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsi...    59   7e-07
emb|CCA17998.1| putative polyprotein [Albugo laibachii Nc14]           59   9e-07
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]          57   2e-06
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         57   2e-06
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...    57   2e-06
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]    57   2e-06
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]            57   2e-06
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]    57   3e-06
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    57   3e-06
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]            57   3e-06
ref|XP_004237308.1| PREDICTED: uncharacterized protein LOC101266...    56   4e-06
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      56   4e-06
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    56   4e-06
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    56   4e-06
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    56   4e-06
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...    56   4e-06

>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
 Frame = +3

Query: 15  EPMKAECYLTNAE-ISNLWHN*LAYMSNIYLDKMEAT--VSHRPKNMTPTKKISNYIVAK 185
           +P+ + C+ T  E I  LWH    ++S   L  ++    V+  P+   P+K   + +V K
Sbjct: 436 QPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKLCKDCLVGK 495

Query: 186 LHRKPFKNRTK-TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSKMT 335
            HR     ++     + L++VH+D+CGPI PI+   K Y+LTF+DD+S+ T
Sbjct: 496 QHRSSIPKKSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDFSRKT 546


>gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium castaneum]
          Length = 2375

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
 Frame = +3

Query: 63  LWHN*LAYMSNIYL-----DKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTKT-T 224
           LWH  L ++SN  L     + M + ++ R  N   ++     + +K+ + PF  R+   T
Sbjct: 407 LWHRRLGHLSNKNLVTLSKNNMVSGLNIRNSNCNESQICEVCVKSKITKLPFGKRSDNKT 466

Query: 225 NQCLEIVHSDLCGPITPITCD*KSYILTFSDDYS 326
            + LE++HSDLCGPITP T D K Y LTF DDY+
Sbjct: 467 TRVLELIHSDLCGPITPETHDGKRYFLTFLDDYT 500


>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
          Length = 808

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = +3

Query: 123 VSHRPKNMTPTKKISNYIVAKLHRKPF-KNRTKTTNQCLEIVHSDLCGPITPITCD*KSY 299
           V+  P   TP++     +V K HR  F K ++   N+ LE+VHSD+CGPI P +   K Y
Sbjct: 2   VTGLPPIQTPSQICEECVVGKQHRYQFPKGKSWKANKVLELVHSDICGPINPTSNGGKRY 61

Query: 300 ILTFSDDYSKMT 335
            +TF DDYS+ T
Sbjct: 62  FITFIDDYSRKT 73


>pir||E84492 probable retroelement pol polyprotein [imported] - Arabidopsis
           thaliana
          Length = 531

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = +3

Query: 36  YLTNAEISNLWHN*LAYMSNIYLDKM--EATVSHRPKNMTPTKKISNYIVAKLHRKPFKN 209
           YLT+  +S+LWH  + ++S I L  M  +  +   P  +  ++   + ++ K  R+ F  
Sbjct: 295 YLTSTSMSSLWHARMGHVSLITLKSMIDKELIQGAPSLVIESEVCGSCLLGKQTRQSFPQ 354

Query: 210 RTK-TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
            T     + LE++H DLCGPITP T     YI    DDYS+
Sbjct: 355 ATVFRATKKLELIHGDLCGPITPKTSVGNRYIFVLIDDYSR 395


>gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 767

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = +3

Query: 36  YLTNAEISNLWHN*LAYMSNIYLDKM--EATVSHRPKNMTPTKKISNYIVAKLHRKPFKN 209
           YLT+  +S+LWH  + ++S I L  M  +  +   P  +  ++   + ++ K  R+ F  
Sbjct: 192 YLTSTSMSSLWHARMGHVSLITLKSMIDKELIQGAPSLVIESEVCGSCLLGKQTRQSFPQ 251

Query: 210 RTK-TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
            T     + LE++H DLCGPITP T     YI    DDYS+
Sbjct: 252 ATVFRATKKLELIHGDLCGPITPKTSVGNRYIFVLIDDYSR 292


>emb|CCA17998.1| putative polyprotein [Albugo laibachii Nc14]
          Length = 859

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
 Frame = +3

Query: 60  NLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKI-------SNYIVAKLHRKPF---KN 209
           NLWH  + ++    + K++  VS    N      +       S     K   KPF   KN
Sbjct: 197 NLWHAWVGHLPIDQIQKLQQCVSGIHVNELLAHDVYDDEDVCSGCAKGKASVKPFNKLKN 256

Query: 210 RTKTTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSKM 332
           +  +T   LEIVHSD+ GPITP +     Y+LTF+DDYS++
Sbjct: 257 KEYSTTDVLEIVHSDIMGPITPTSVGGSRYVLTFTDDYSRL 297


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/97 (35%), Positives = 49/97 (50%)
 Frame = +3

Query: 39  LTNAEISNLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTK 218
           L+N++ +NLWH  L +MS I L ++        +++   K   + I  K  R  F   T 
Sbjct: 259 LSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTH 318

Query: 219 TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
           TT   L+ VHSDL GP    +     YI+T  DDYS+
Sbjct: 319 TTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSR 355


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/97 (34%), Positives = 50/97 (51%)
 Frame = +3

Query: 39  LTNAEISNLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTK 218
           L+N++ +NLWH  L +MS I L ++        ++++  K   + I  K  R  F   T 
Sbjct: 427 LSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTH 486

Query: 219 TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
           TT   L+ VHSDL GP    +     Y++T  DDYS+
Sbjct: 487 TTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSR 523


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/97 (35%), Positives = 49/97 (50%)
 Frame = +3

Query: 39  LTNAEISNLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTK 218
           L+N++ +NLWH  L +MS I L ++        +++   K   + I  K  R  F   T 
Sbjct: 393 LSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTH 452

Query: 219 TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
           TT   L+ VHSDL GP    +     YI+T  DDYS+
Sbjct: 453 TTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSR 489


>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
          Length = 1283

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
 Frame = +3

Query: 63  LWHN*LAYMSNIYLDKMEAT--VSHRPKNMTPTKKISNYIVAKLHRKPF-KNRTKTTNQC 233
           LWH    +++   L  ++    V+  P   TP++     +V K HR  F K ++   N+ 
Sbjct: 425 LWHFRYGHLNFGGLKTLQQKNMVTGLPPIXTPSQICEECVVGKQHRYQFPKGKSWRXNKV 484

Query: 234 LEIVHSDLCGPITPITCD*KSYILTFSDDYSKMT 335
           LE+VHSD+CGPI P +   K Y +TF  DYS  T
Sbjct: 485 LELVHSDICGPINPTSNGGKRYFITFIXDYSXKT 518


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/97 (35%), Positives = 49/97 (50%)
 Frame = +3

Query: 39  LTNAEISNLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTK 218
           L+N++ +NLWH  L +MS I L ++        +++   K   + I  K  R  F   T 
Sbjct: 259 LSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTH 318

Query: 219 TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
           TT   L+ VHSDL GP    +     YI+T  DDYS+
Sbjct: 319 TTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSR 355


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
 Frame = +3

Query: 9   VMEPMKAECYLTNAE-ISNLWHN*LAYMSNIYLDKMEAT--VSHRPKNMTPTKKISNYIV 179
           + +P+ + C+    E I +LWH    ++S   L  ++    V+  P+  +P +   + +V
Sbjct: 393 ISQPIASTCFNAITEDIVHLWHCRYGHLSFKGLKTLQQKKMVNGLPQLKSPLRLCKDCLV 452

Query: 180 AKLHRKPFK-NRTKTTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSKMT 335
            K  R  F    T   +Q L +VH+D+ GPI PI+   K Y++TF+DD+S+ T
Sbjct: 453 GKQQRYSFPWKSTWRASQILXLVHADIXGPIKPISNSKKRYLITFTDDFSRKT 505


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
 Frame = +3

Query: 57  SNLWHN*LAYMS--NIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPF-KNRTKTTN 227
           SNLWH    +++   + L   +  V   PK +         I  K  +KPF K R++  +
Sbjct: 548 SNLWHLRYGHLNVKGLKLLSKKEMVFELPK-IDSVNVCEGCIYGKQSKKPFPKGRSRRAS 606

Query: 228 QCLEIVHSDLCGPITPITCD*KSYILTFSDDYSKMT 335
            CLEI+H+DLCGP+   +     Y L F+DD+S+M+
Sbjct: 607 SCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMS 642


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/97 (34%), Positives = 49/97 (50%)
 Frame = +3

Query: 39  LTNAEISNLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTK 218
           L+N++ +NLWH  L +MS I L ++        +++       + I  K HR  F   T 
Sbjct: 248 LSNSDATNLWHMRLGHMSEIGLAELSKRGMLDGQSIGKLIFCEHCIFGKHHRVKFNTSTH 307

Query: 219 TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
           TT   L+ VHSDL GP    +     Y++T  DDYS+
Sbjct: 308 TTEGILDYVHSDLWGPTCKTSFGGARYMMTIIDDYSR 344


>ref|XP_004237308.1| PREDICTED: uncharacterized protein LOC101266020 [Solanum
           lycopersicum]
          Length = 771

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
 Frame = +3

Query: 33  CYLTNAEISNLWHN*LAYMSNIYLDKM--EATVSHRPKNMTPTKKISNYIV-AKLHRKPF 203
           C     E ++LWH  L ++S+  L+K+  +  V   PK      KI    V  K  R  F
Sbjct: 428 CLSAQNENADLWHRRLGHVSSSLLNKLISKDLVQGLPKLKFAENKICEACVKGKQIRSSF 487

Query: 204 KNRTK-TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSKMT 335
           K + + T+++ LE++H DLCGP+   + + K YIL   DDYS+ T
Sbjct: 488 KPKNQVTSSRTLELLHMDLCGPLKVQSRNGKKYILVIVDDYSRYT 532


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 49/97 (50%)
 Frame = +3

Query: 39  LTNAEISNLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTK 218
           L+N++ +NLWH  L +MS I L ++        +++   K   + I  K  R  F   T 
Sbjct: 462 LSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTH 521

Query: 219 TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
           TT   L+ VHSDL GP    +     Y++T  DDYS+
Sbjct: 522 TTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSR 558


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 49/97 (50%)
 Frame = +3

Query: 39  LTNAEISNLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTK 218
           L+N++ +NLWH  L +MS I L ++        +++   K   + I  K  R  F   T 
Sbjct: 388 LSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTH 447

Query: 219 TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
           TT   L+ VHSDL GP    +     Y++T  DDYS+
Sbjct: 448 TTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSR 484


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 49/97 (50%)
 Frame = +3

Query: 39  LTNAEISNLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTK 218
           L+N++ +NLWH  L +MS I L ++        +++   K   + I  K  R  F   T 
Sbjct: 442 LSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTH 501

Query: 219 TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
           TT   L+ VHSDL GP    +     Y++T  DDYS+
Sbjct: 502 TTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSR 538


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 49/97 (50%)
 Frame = +3

Query: 39  LTNAEISNLWHN*LAYMSNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTK 218
           L+N++ +NLWH  L +MS I L ++        +++   K   + I  K  R  F   T 
Sbjct: 462 LSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTH 521

Query: 219 TTNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSK 329
           TT   L+ VHSDL GP    +     Y++T  DDYS+
Sbjct: 522 TTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSR 558


>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
 Frame = +3

Query: 51  EISNLWHN*LAYM--SNIYLDKMEATVSHRPKNMTPTKKISNYIVAKLHRKPFKNRTKT- 221
           E + LWH  L +   SN+ + + +  V+  PK      K  + I++K  R PF   ++T 
Sbjct: 155 EATELWHKRLGHTGHSNLKILQSKEMVTGLPKFNVEEGKCESCILSKHSRDPFPKESETR 214

Query: 222 TNQCLEIVHSDLCGPITPITCD*KSYILTFSDDYSKM 332
               LE++HSD+CGP+   + +   YILTF DD ++M
Sbjct: 215 AKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRM 251