BLASTX nr result

ID: Ephedra27_contig00026433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026433
         (386 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17210.1| unknown [Picea sitchensis]                              57   2e-06
gb|AFK46248.1| unknown [Lotus japonicus]                               56   4e-06
ref|XP_006285135.1| hypothetical protein CARUB_v10006476mg [Caps...    56   6e-06

>gb|ABR17210.1| unknown [Picea sitchensis]
          Length = 79

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/48 (52%), Positives = 38/48 (79%)
 Frame = +3

Query: 48  AESSGRARKAMMVCGEEALQLLNCVANSSYDDSKCLPLLSKLRSCILQ 191
           + S+ + ++A  VCG+EAL+LLNCVA++ Y + KC+ LLS LR+CI+Q
Sbjct: 9   SSSTTQQQEAEPVCGDEALKLLNCVASTPYQEEKCVALLSALRTCIIQ 56


>gb|AFK46248.1| unknown [Lotus japonicus]
          Length = 67

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/38 (68%), Positives = 28/38 (73%)
 Frame = +3

Query: 75  AMMVCGEEALQLLNCVANSSYDDSKCLPLLSKLRSCIL 188
           A  VC EEAL LLNCVA SSYD  KCL LL+ LR C+L
Sbjct: 7   AKPVCAEEALNLLNCVAQSSYDQDKCLHLLNSLRDCVL 44


>ref|XP_006285135.1| hypothetical protein CARUB_v10006476mg [Capsella rubella]
           gi|482553840|gb|EOA18033.1| hypothetical protein
           CARUB_v10006476mg [Capsella rubella]
          Length = 145

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +3

Query: 84  VCGEEALQLLNCVANSSYDDSKCLPLLSKLRSCIL 188
           VCG+EALQLLNCVA+S +D  KCL LL  LR C+L
Sbjct: 84  VCGQEALQLLNCVADSKFDQEKCLRLLQSLRECVL 118


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