BLASTX nr result
ID: Ephedra27_contig00026314
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00026314
(430 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_006410519.1| hypothetical protein EUTSA_v10016424mg [Eutr... 96 6e-18
ref|NP_001050194.1| Os03g0369700 [Oryza sativa Japonica Group] g... 96 6e-18
gb|EXC69910.1| hypothetical protein L484_000172 [Morus notabilis] 95 8e-18
gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis] 95 8e-18
ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selagin... 95 8e-18
ref|XP_004250511.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
gb|EOY32670.1| Pentatricopeptide repeat-containing protein [Theo... 94 1e-17
ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Caps... 94 1e-17
ref|XP_004297001.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
gb|EAY90173.1| hypothetical protein OsI_11738 [Oryza sativa Indi... 94 2e-17
ref|NP_180932.1| pentatricopeptide repeat-containing protein [Ar... 94 2e-17
ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selagin... 94 2e-17
ref|XP_002879469.1| pentatricopeptide repeat-containing protein ... 94 2e-17
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 94 2e-17
gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis] 93 3e-17
ref|XP_006468080.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_006436374.1| hypothetical protein CICLE_v10031036mg [Citr... 93 3e-17
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
emb|CBI40338.3| unnamed protein product [Vitis vinifera] 93 3e-17
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/135 (38%), Positives = 83/135 (61%)
Frame = +3
Query: 24 ELMIPLQSKSYLTTDDYLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYT 203
EL L S+ + T + +LL A VG+ + E IH+ +++AG+ N + +++MY+
Sbjct: 464 ELFSHLDSEVEVDTFTFASLLSGAASVGAVGKGEQIHARVLKAGIQSNQSVSNALISMYS 523
Query: 204 KCGSIESAHKVFDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYA 383
+CG+IE+A +VF+ M + N +W +IT +AK G + A+ +F +ML D I KPNE TY
Sbjct: 524 RCGNIEAAFQVFEGMEDRNVISWTSIITGFAKHGFAHRAVELFNQMLEDGI-KPNEVTYI 582
Query: 384 AALSACAKKGGLGHG 428
A LSAC+ G + G
Sbjct: 583 AVLSACSHVGLVDEG 597
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKC---GSIESAHKVFD 242
+ +L CAE G +H +I++ L + +G +++MY K GS++ + KVFD
Sbjct: 275 FSGVLSACAEPGLSLLGRQLHGGVIKSRLSADVCVGCSLVDMYAKSTMDGSMDDSRKVFD 334
Query: 243 KMSEENRTAWNLMITAYAKQGRCN-DAMFMFRRMLRDAIFKPNEFTYAAALSAC 401
+M++ N +W +IT Y + G + +A+ ++ RM+ + + KPN FT+++ L AC
Sbjct: 335 RMADHNVMSWTAIITGYVQSGHYDMEAIKLYCRMIDNPV-KPNHFTFSSLLKAC 387
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/119 (27%), Positives = 65/119 (54%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+ +LL C + +P E I++ ++ GL + + +++MY K G +E A K F+ +
Sbjct: 380 FSSLLKACGNLSNPAIGEQIYNHAVKLGLASVNCVANSLISMYAKSGRMEEARKAFELLF 439
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
E+N ++N+++ Y+K +A +F + D+ + + FT+A+ LS A G +G G
Sbjct: 440 EKNLVSYNIIVDGYSKSLDSAEAFELFSHL--DSEVEVDTFTFASLLSGAASVGAVGKG 496
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +3
Query: 174 LGTKILNMYTKCGS-IESAHKVFDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRD 350
+G +++++ K S + SA KVFD+M E N W LMIT +++ G DA+ +F M+ +
Sbjct: 207 VGCALIDLFAKGFSDLRSAKKVFDRMPERNLVTWTLMITRFSQLGASKDAVRLFLEMVSE 266
Query: 351 AIFKPNEFTYAAALSACAKKG 413
F P+ FT++ LSACA+ G
Sbjct: 267 G-FVPDRFTFSGVLSACAEPG 286
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/120 (30%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
Y LL C + +++HS + + L ++ L ++++Y+K GS E+A K+F+ M
Sbjct: 70 YTVLLKSCIRTRNFQFGQLLHSKLNDSPLEPDTILLNSLISLYSKMGSWETAEKIFESMG 129
Query: 252 EE-NRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSAC--AKKGGLG 422
E+ + +W+ MI+ YA G +++F F M+ + PN+F ++A + AC A+ G +G
Sbjct: 130 EKRDLVSWSAMISCYAHCGMELESVFTFFDMVEFGEY-PNQFCFSAVIQACCSAELGWVG 188
>ref|XP_006410519.1| hypothetical protein EUTSA_v10016424mg [Eutrema salsugineum]
gi|557111688|gb|ESQ51972.1| hypothetical protein
EUTSA_v10016424mg [Eutrema salsugineum]
Length = 583
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/119 (40%), Positives = 70/119 (58%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
++ LL CA+ G+ +H I++ GLG N LGT ++N+Y++CG + A +VFDKM+
Sbjct: 211 FVGLLSACAQTGAIGLGSWVHQYIVRDGLGLNVKLGTALINLYSRCGDVGKAREVFDKMT 270
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
E N AW MI+AY G A+ +F +M D PN+ T+ A LSACA G + G
Sbjct: 271 ETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDHGPIPNDVTFVAVLSACAHAGLVEEG 329
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/119 (29%), Positives = 73/119 (61%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+ +++ CA++ + + +H + +G G ++++ + Y+KCG +++A +VFDKM
Sbjct: 110 FTSVIKSCADLSALGIGKGVHCHAVVSGFGVDTYVQAAFVTFYSKCGDMKAARQVFDKMP 169
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
E++ AWN +++ + G +A+ +F +M R++ F+P+ T+ LSACA+ G +G G
Sbjct: 170 EKSIVAWNSLVSGLEQNGLAEEAIRVFYQM-RESGFEPDSATFVGLLSACAQTGAIGLG 227
>ref|NP_001050194.1| Os03g0369700 [Oryza sativa Japonica Group]
gi|12039352|gb|AAG46139.1|AC082644_21 hypothetical
protein [Oryza sativa Japonica Group]
gi|108708369|gb|ABF96164.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113548665|dbj|BAF12108.1| Os03g0369700 [Oryza sativa
Japonica Group] gi|125544037|gb|EAY90176.1| hypothetical
protein OsI_11741 [Oryza sativa Indica Group]
gi|125586399|gb|EAZ27063.1| hypothetical protein
OsJ_10992 [Oryza sativa Japonica Group]
Length = 513
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/125 (36%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +3
Query: 60 TTDDYLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVF 239
T ++++L C+ + SP E +H +I++ L + G+ +L+MY+KCG ++ ++F
Sbjct: 259 TVSTFVSVLGACSLLSSPEIGEQVHCQVIKSSLSSDIKAGSALLDMYSKCGRVDDGRRIF 318
Query: 240 DKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLR--DAIFKPNEFTYAAALSACAKKG 413
D+M+E N W MI Y K G ++A+ +F +MLR D +PN T+ +ALSACA+ G
Sbjct: 319 DRMAERNVITWTSMIDGYGKNGLSDEALQLFEQMLRRHDDAIRPNHATFLSALSACARAG 378
Query: 414 GLGHG 428
L G
Sbjct: 379 LLSRG 383
>gb|EXC69910.1| hypothetical protein L484_000172 [Morus notabilis]
Length = 301
Score = 95.1 bits (235), Expect = 8e-18
Identities = 43/120 (35%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
Frame = +3
Query: 75 LNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSE 254
+ +L CA+VG+ + + + +++GL H+ ++ T +L+MY KCGS++ A +VF++M +
Sbjct: 14 VGVLSACAQVGALDMGKWVDNFALESGLQHDVYVATALLDMYAKCGSLDDALRVFEEMPQ 73
Query: 255 ENRTAWNLMITAYAKQGRCNDAMFMFRRMLRD--AIFKPNEFTYAAALSACAKKGGLGHG 428
+N +WN MI+A A GR +A+ +F RM+ + A+ +PN+ T+ LSAC G + G
Sbjct: 74 KNEVSWNAMISALAFHGRAIEAISLFNRMIEEGGALARPNDITFVGVLSACVHAGLVDEG 133
>gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis]
Length = 619
Score = 95.1 bits (235), Expect = 8e-18
Identities = 43/120 (35%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
Frame = +3
Query: 75 LNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSE 254
+ +L CA+VG+ + + + +++GL H+ ++ T +L+MY KCGS++ A +VF++M +
Sbjct: 279 VGVLSACAQVGALDMGKWVDNFALESGLQHDVYVATALLDMYAKCGSLDDALRVFEEMPQ 338
Query: 255 ENRTAWNLMITAYAKQGRCNDAMFMFRRMLRD--AIFKPNEFTYAAALSACAKKGGLGHG 428
+N +WN MI+A A GR +A+ +F RM+ + A+ +PN+ T+ LSAC G + G
Sbjct: 339 KNEVSWNAMISALAFHGRAIEAISLFNRMIEEGGALARPNDITFVGVLSACVHAGLVDEG 398
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/118 (34%), Positives = 70/118 (59%)
Frame = +3
Query: 75 LNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSE 254
+++L C ++G + +++ L NS+LG+ ++ MY KCG + SA +VFD M++
Sbjct: 178 VSVLGACGDLGDLSLGRWVEEFVVEKSLEVNSYLGSALIGMYGKCGDLCSARRVFDSMTK 237
Query: 255 ENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
++ WN MI+ YA+ G ++A+ +F M ++A PN+ T LSACA+ G L G
Sbjct: 238 KDLVTWNAMISGYAQNGLSDEAIRLFGDM-KEAGINPNKITLVGVLSACAQVGALDMG 294
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/112 (31%), Positives = 57/112 (50%)
Frame = +3
Query: 93 CAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEENRTAW 272
CA + + HS + + GL + + ++ MY +CG + A +VFD+++ ++W
Sbjct: 83 CANLSTLNHGRTAHSSVFKIGLDGDEHVSNSLITMYARCGELGCAREVFDEITLRGLSSW 142
Query: 273 NLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
N MI+ Y+K G +A+ +F M D I P E T + L AC G L G
Sbjct: 143 NSMISGYSKMGYAREAVELFGEMRDDGI-APVEMTLVSVLGACGDLGDLSLG 193
>ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein
SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/119 (35%), Positives = 71/119 (59%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
++ +L C+ +G + +++H +++AGL N +GT ++ MY KCG +E A +VFDK++
Sbjct: 106 FVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLA 165
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
++ +W MI Y + RC +A+ +F RM + PN TYA A+SACA + G
Sbjct: 166 LQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVL-PNRITYATAISACAHVESMADG 223
Score = 83.6 bits (205), Expect = 2e-14
Identities = 39/119 (32%), Positives = 65/119 (54%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
Y + CA V S ++IHS +++ G + + I+NMY KCGS+E A +VF++M
Sbjct: 207 YATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMP 266
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
N +WN ++ A + G C +A++ F+RM P++ T+ L+AC+ L G
Sbjct: 267 HPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFG 325
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/125 (31%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 39 LQSKSYLTTDD--YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCG 212
+Q + +T D ++ +L+ C+ + E++H CI+Q G + +G I+ MY+ CG
Sbjct: 296 MQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCG 355
Query: 213 SIESAHKVFDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAAL 392
I++A F M E + +WN +I+ +A+ G C++A+ +FRRML + I P++FT+ + +
Sbjct: 356 RIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGI-TPDKFTFISII 414
Query: 393 SACAK 407
A+
Sbjct: 415 DGTAR 419
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/119 (27%), Positives = 60/119 (50%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+L LL LCA+ + + +HS + + + + ++MY KCG +E A VF +
Sbjct: 5 FLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLD 64
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
++ +WN ++ A+A+ G+ A +F+RM + P+ T+ L C+ G L G
Sbjct: 65 HPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGL-APDRITFVTVLDGCSAIGDLSRG 122
Score = 66.6 bits (161), Expect = 3e-09
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Frame = +3
Query: 3 SKHGRLRELMIPLQSKSY--LTTDDYLNLLHLCAEVGSPP----QPEIIHSCIIQAGLGH 164
++HG RE + Q + D + L A GS P Q ++ I G
Sbjct: 679 AEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYET 738
Query: 165 NSFLGTKILNMYTKCGSIESAHKVFDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRML 344
++ +G I++M+ + G + A + F+++ E + +WN+++TA+A+ G A+ +FRRM
Sbjct: 739 DTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQ 798
Query: 345 RDAIFKPNEFTYAAALSACAKKGGLGHG 428
+++ +P+ T + LSAC+ G + G
Sbjct: 799 QES-SRPDSITLVSVLSACSHGGLIEEG 825
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/107 (27%), Positives = 62/107 (57%)
Frame = +3
Query: 84 LHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEENR 263
L+ CA + + + ++IH+ I+ G + +G ++NMY KCG +E A +VF + +N
Sbjct: 512 LNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCG-KNL 570
Query: 264 TAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACA 404
+WN + AY ++ + +A+ +F+ M + + K ++ ++ L+ C+
Sbjct: 571 VSWNTIAAAYVQRDKWREALQLFQEMQLEGL-KADKVSFVTVLNGCS 616
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/122 (25%), Positives = 63/122 (51%)
Frame = +3
Query: 63 TDDYLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFD 242
T D + + + +I+ ++++G+ + FL + ++NM+++ G++ A +FD
Sbjct: 404 TPDKFTFISIIDGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFD 463
Query: 243 KMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLG 422
M + + W +I++Y + G +DA+ R M + + N+FT AL+ACA L
Sbjct: 464 DMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLM-GNDFTLVTALNACASLTALS 522
Query: 423 HG 428
G
Sbjct: 523 EG 524
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/109 (27%), Positives = 62/109 (56%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
++ +L+ C+ S + IH+ +++ G+ + + T +LNMYT S++ A ++F +M
Sbjct: 608 FVTVLNGCS---SASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRME 664
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSA 398
+ +WN MI A+ G +A+ MF+RM + + P++ ++ L+A
Sbjct: 665 FRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGV-APDKISFVTVLNA 712
>ref|XP_004250511.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Solanum lycopersicum]
Length = 646
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/116 (39%), Positives = 71/116 (61%)
Frame = +3
Query: 81 LLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEEN 260
LL ++V S + E +H I + G G+N+ L T + +MY KCG + + ++FD M +++
Sbjct: 410 LLSASSQVSSLEKGEKVHQYIKEVGFGNNTLLDTALTDMYAKCGQLTKSREIFDSMEKKD 469
Query: 261 RTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
+WN++I+ YA G NDA+ MF+ M + I KPNE T+ A LSACA G + G
Sbjct: 470 IVSWNVLISGYAMYGEANDAIEMFKNMEQTEI-KPNELTFLAVLSACAHAGLVEEG 524
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/101 (28%), Positives = 55/101 (54%)
Frame = +3
Query: 93 CAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEENRTAW 272
C +G+ + + H ++ G G++ + + +L MY+KCGS+E ++ F ++ E++ +W
Sbjct: 111 CGNLGALVEGKCFHGLGMKTGFGYHQVVQSSVLLMYSKCGSVEETYRSFCEVDEKDLFSW 170
Query: 273 NLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALS 395
++I YAK + + MF RML I P+ + LS
Sbjct: 171 TVVIGVYAKYECIGECVDMFLRMLASGI-TPDGMVISCVLS 210
>gb|EOY32670.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 869
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Frame = +3
Query: 75 LNLLHLCAEVGSPPQPEIIHSCII--QAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKM 248
+N+L C + PQ + H+ ++ ++ LGHN LG + MY +CGS++SA ++F +
Sbjct: 567 INILSSCTHLAHLPQGQCFHAYMLRQESSLGHNLSLGNAFITMYARCGSMQSAERIFKTL 626
Query: 249 SEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
N +WN +IT Y GR +DA+ F +ML D + PNE T+ + LSAC+ G + G
Sbjct: 627 PRRNIISWNAIITGYGMHGRGSDAILAFSQMLEDGYY-PNEVTFISVLSACSHSGMIEEG 685
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/107 (38%), Positives = 59/107 (55%)
Frame = +3
Query: 81 LLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEEN 260
+L C ++ + + IH I L + +GT I++ Y KCG IE A KVFD+M E +
Sbjct: 64 VLKACVKLNAVETGKRIHLSIRNTNLIEDVRVGTAIIDFYCKCGFIEEARKVFDEMVERD 123
Query: 261 RTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSAC 401
+WN MI+ YA G + +F+ RM R+ F+PN T A L AC
Sbjct: 124 LVSWNAMISGYAGCGEFEEVVFLVMRMQREG-FRPNSRTLVAMLLAC 169
Score = 58.9 bits (141), Expect = 7e-07
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 75 LNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSE 254
L L+ CAE GS IH I+ ++ F+ +LNMY GS++SA K+FD
Sbjct: 264 LALIQACAEFGSLELGSQIHQMAIKCSYSNDLFIVNALLNMYADIGSLKSACKLFDVTPR 323
Query: 255 ENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKG-GLGHG 428
+ WN MI+AY + +A +F M R K ++ T S CA+ GL G
Sbjct: 324 RDVALWNSMISAYFEYSCNEEATSLFVHM-RTEGNKEDDRTIVIMFSLCAESADGLRKG 381
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/100 (29%), Positives = 48/100 (48%)
Frame = +3
Query: 129 IHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEENRTAWNLMITAYAKQGR 308
+H +I+ G+ N L T + +MY CG +A +F+ + +WN +I Y K
Sbjct: 485 LHGFVIKQGIEVNVSLNTALTDMYINCGDEATARNLFESCPGRDLISWNALIATYVKNNL 544
Query: 309 CNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
++A +F RM+ + +PN T LS+C L G
Sbjct: 545 AHEAFLVFSRMISEV--EPNSVTIINILSSCTHLAHLPQG 582
>ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Capsella rubella]
gi|482564899|gb|EOA29089.1| hypothetical protein
CARUB_v10025353mg [Capsella rubella]
Length = 579
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/119 (38%), Positives = 68/119 (57%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+++LL CA+ G+ +H I++ GL N LGT ++N+Y++CG + + +VFDKM
Sbjct: 207 FVSLLSACAQTGAISLGSWVHQYIVREGLDLNVKLGTALVNLYSRCGDVGKSREVFDKMK 266
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
E N AW MI+AY G A+ +F +M D PN T+ A LSACA G + G
Sbjct: 267 ETNVAAWTAMISAYGTHGYGKQAVELFNKMEDDCGLAPNNVTFVAVLSACAHAGLVEEG 325
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/130 (28%), Positives = 72/130 (55%)
Frame = +3
Query: 39 LQSKSYLTTDDYLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSI 218
L S T + +++ CA++ + E +H + G G ++++ + Y+KCG +
Sbjct: 95 LSSNVSPTNYTFTSVVKSCADLSALRIGEGVHCHAVVTGFGLDTYVQAAFVTFYSKCGDL 154
Query: 219 ESAHKVFDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSA 398
+A +VFD M E++ AWN +I+ + G DA+ +F +M +++ +P+ T+ + LSA
Sbjct: 155 RAARQVFDIMPEKSIVAWNSLISGLEQNGMAEDAIRVFYQM-QESGLEPDSATFVSLLSA 213
Query: 399 CAKKGGLGHG 428
CA+ G + G
Sbjct: 214 CAQTGAISLG 223
>ref|XP_004297001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Fragaria vesca subsp. vesca]
Length = 580
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/114 (38%), Positives = 69/114 (60%)
Frame = +3
Query: 78 NLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEE 257
+ L CA+ + P + IH+ +I+A L + FL +LNMY KCG + +A ++FD+M
Sbjct: 34 HFLRTCAQSSNLPNGQAIHAKLIKASLPFSPFLQNHLLNMYVKCGHLNNALQLFDEMLHR 93
Query: 258 NRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGL 419
N +W+ +I + + G +A+ +F RM RD I KPNEFT ++L AC+ G L
Sbjct: 94 NVVSWSALIKGFVQHGCAKEALALFGRMHRDGITKPNEFTLVSSLQACSLCGSL 147
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +3
Query: 84 LHLCAEVGSPPQPEIIHSCII--QAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEE 257
L+ CA + S + + H I + + + +L+MY KCG ++ A VF+ M +
Sbjct: 339 LNACANLASLEEGKKFHGLRIKLETCTDVDVCVDNALLDMYAKCGCVDGARCVFESMKDC 398
Query: 258 NRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
+ +W MI A A+ G+ +A+ F +M +PN T+ L AC++ G + G
Sbjct: 399 SVVSWTTMIMACAQNGQAREALLTFDKMRLQEGIQPNYITFICVLYACSQGGFIDEG 455
>gb|EAY90173.1| hypothetical protein OsI_11738 [Oryza sativa Indica Group]
Length = 408
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Frame = +3
Query: 60 TTDDYLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVF 239
T ++++L C+ + SP E +H +I++ L + G+ +L+MY+KCG ++ ++F
Sbjct: 72 TVSTFVSVLGACSLLSSPEIGEQVHCQVIKSSLSSDIKAGSALLDMYSKCGRVDDGRRIF 131
Query: 240 DKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLR------DAIFKPNEFTYAAALSAC 401
D+M+E N W MI Y K G ++A+ +F +MLR D +PN T+ +ALSAC
Sbjct: 132 DRMAERNVITWTSMIDGYGKNGLSDEALQLFEQMLRRRRRRHDDAIRPNHATFLSALSAC 191
Query: 402 AKKGGLGHG 428
A+ G L G
Sbjct: 192 ARAGLLSRG 200
>ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g33760 gi|1707020|gb|AAC69141.1| hypothetical protein
[Arabidopsis thaliana] gi|330253787|gb|AEC08881.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 583
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/119 (40%), Positives = 67/119 (56%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+++LL CA+ G+ +H II GL N LGT ++N+Y++CG + A +VFDKM
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
E N AW MI+AY G A+ +F +M D PN T+ A LSACA G + G
Sbjct: 271 ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/119 (28%), Positives = 75/119 (63%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+ +++ CA++ + + +H + +G G ++++ ++ Y+KCG +E A +VFD+M
Sbjct: 110 FTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP 169
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
E++ AWN +++ + + G ++A+ +F +M R++ F+P+ T+ + LSACA+ G + G
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQM-RESGFEPDSATFVSLLSACAQTGAVSLG 227
>ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein
SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/119 (35%), Positives = 69/119 (57%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
++ +L C G + +++H +++AGL N +GT ++ MY KCG +E A +VFDK++
Sbjct: 106 FVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLA 165
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
++ +W MI Y + RC +A+ +F RM + PN TYA A+SACA + G
Sbjct: 166 LQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVL-PNRITYATAISACAHVESMADG 223
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/119 (32%), Positives = 65/119 (54%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
Y + CA V S ++IHS +++ G + + I+NMY KCGS+E A +VF++M
Sbjct: 207 YATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMP 266
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
N +WN ++ A + G C +A++ F+RM P++ T+ L+AC+ L G
Sbjct: 267 HPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFG 325
Score = 79.7 bits (195), Expect = 4e-13
Identities = 35/112 (31%), Positives = 68/112 (60%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
++ +L+ C+ + E+++ CI+Q G + +G I+ MY+ CG I++A F M
Sbjct: 309 FITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMV 368
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAK 407
E + +WN +I+ +A+ G C++A+ +FRRML + I P++FT+ + + A+
Sbjct: 369 ERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGI-TPDKFTFISIIDGTAR 419
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/119 (27%), Positives = 59/119 (49%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+L LL LCA+ + + +HS + + + + ++MY KCG +E A VF +
Sbjct: 5 FLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLD 64
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
++ +WN ++ A+A+ G+ A +F+RM + P+ T+ L C G L G
Sbjct: 65 HPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGL-APDRITFVTVLDGCTATGDLSRG 122
Score = 66.6 bits (161), Expect = 3e-09
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Frame = +3
Query: 3 SKHGRLRELMIPLQSKSY--LTTDDYLNLLHLCAEVGSPP----QPEIIHSCIIQAGLGH 164
++HG RE + Q + D + L A GS P Q ++ I G
Sbjct: 679 AEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYET 738
Query: 165 NSFLGTKILNMYTKCGSIESAHKVFDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRML 344
++ +G I++M+ + G + A + F+++ E + +WN+++TA+A+ G A+ +FRRM
Sbjct: 739 DTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQ 798
Query: 345 RDAIFKPNEFTYAAALSACAKKGGLGHG 428
+++ +P+ T + LSAC+ G + G
Sbjct: 799 QES-SRPDSITLVSVLSACSHGGLIEEG 825
Score = 63.2 bits (152), Expect = 3e-08
Identities = 30/107 (28%), Positives = 61/107 (57%)
Frame = +3
Query: 84 LHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEENR 263
L+ CA + + + ++IHS I+ G + +G ++NMY KCG +E A VF + +N
Sbjct: 512 LNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCG-KNL 570
Query: 264 TAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACA 404
+WN + AY ++ + +A+ +F+ M + + K ++ ++ L+ C+
Sbjct: 571 VSWNTIAAAYVQRDKWREALQLFQEMQLEGL-KADKVSFVTVLNGCS 616
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/122 (25%), Positives = 63/122 (51%)
Frame = +3
Query: 63 TDDYLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFD 242
T D + + + +I+ ++++G+ + FL + ++NM+++ G++ A +FD
Sbjct: 404 TPDKFTFISIIDGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFD 463
Query: 243 KMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLG 422
M + + W +I++Y + G +DA+ R M + + N+FT AL+ACA L
Sbjct: 464 DMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLM-GNDFTLVTALNACASLTALS 522
Query: 423 HG 428
G
Sbjct: 523 EG 524
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/109 (27%), Positives = 62/109 (56%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
++ +L+ C+ S + IH+ +++ G+ + + T +LNMYT S++ A ++F +M
Sbjct: 608 FVTVLNGCS---SASEGSKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRME 664
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSA 398
+ +WN MI A+ G +A+ MF+RM + + P++ ++ L+A
Sbjct: 665 FRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGV-APDKISFVTVLNA 712
>ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325308|gb|EFH55728.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 583
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/114 (40%), Positives = 65/114 (57%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+++LL CA+ G+ +H I+ GL N LGT ++N+Y++CG + A +VFDKM
Sbjct: 211 FVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKG 413
E N AW MI+AY G A+ +F +M D PN T+ A LSACA G
Sbjct: 271 ETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAG 324
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/119 (29%), Positives = 75/119 (63%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+ +++ CA++ + + +H + +G G ++++ ++ Y+KCG +E+A +VFD+M
Sbjct: 110 FTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMP 169
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
E++ AWN +++ + + G DA+ +F +M R++ F+P+ T+ + LSACA+ G + G
Sbjct: 170 EKSVVAWNSLVSGFEQNGLAEDAIRVFYQM-RESGFEPDSATFVSLLSACAQTGAISLG 227
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/118 (38%), Positives = 71/118 (60%)
Frame = +3
Query: 75 LNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSE 254
+ +L C ++G E IH CI++ G+ N F+GT +++MY KCG++E A VFD M E
Sbjct: 217 VRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPE 276
Query: 255 ENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
++ +W MI YA G +A+ +F +M R+ + KP+ +T LSACA+ G L G
Sbjct: 277 KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENV-KPDCYTVVGVLSACARLGALELG 333
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/100 (37%), Positives = 60/100 (60%)
Frame = +3
Query: 129 IHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEENRTAWNLMITAYAKQGR 308
IH+ +++ G + F+ T ++ +Y KCG +E AHKVFD + ++N +W +I+ Y G+
Sbjct: 134 IHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGK 193
Query: 309 CNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
+A+ MFRR+L + P+ FT LSAC + G L G
Sbjct: 194 FREAIDMFRRLL-EMNLAPDSFTIVRVLSACTQLGDLNSG 232
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/118 (28%), Positives = 60/118 (50%)
Frame = +3
Query: 75 LNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSE 254
+ +L CA +G+ E + + + +N LGT ++++Y KCGS+ A +VF M E
Sbjct: 318 VGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKE 377
Query: 255 ENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
++R WN +I+ A G + +F ++ + I KP+ T+ L C G + G
Sbjct: 378 KDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGI-KPDGNTFIGLLCGCTHAGLVDEG 434
>gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]
Length = 750
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/119 (38%), Positives = 74/119 (62%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+ +L CA GS Q + +H+ +I++G +F+G +L+MY K GSIE A KVFD++
Sbjct: 281 FSSLCTACASTGSLEQGKWVHAQVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKKVFDRLV 340
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
+ + +WN M+ YA++G +A+ +F M R+ FKP +FTY++ +ACA G L G
Sbjct: 341 KRDVVSWNSMLNGYARKGETENALRLFSMMHRED-FKPTDFTYSSLCTACASTGSLEQG 398
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/119 (35%), Positives = 67/119 (56%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
Y +L CA GS Q + +H+ +I++G +F+G +L+MY K GSIE A KVFD++
Sbjct: 382 YSSLCTACASTGSLEQGKWVHAHVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKKVFDRLV 441
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
+ + +WN M+ YA+ G + F M+ I +P T+ + L+AC+ G L G
Sbjct: 442 KRDVVSWNSMLRGYAQHGLGRKTVQHFEEMMTSGI-EPISVTFLSVLTACSHAGLLDEG 499
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/109 (32%), Positives = 63/109 (57%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
Y LL C E+ + +++H+ + + + +G ILNMY KCGS+ A K+FD+M
Sbjct: 79 YNRLLKRCTEMRKLREGKMVHAHFLNSQFRDDPVIGNTILNMYAKCGSLADARKLFDEMP 138
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSA 398
++ W +I+ Y++ + +A+ +F MLR + +PN+FT ++ L A
Sbjct: 139 LKDIVTWTALISGYSQHDQAEEALALFPLMLRRGL-EPNQFTLSSLLKA 186
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/146 (25%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Frame = +3
Query: 3 SKHGRLRELM--IPLQSKSYLTTDDYL--NLLHLCAEVGSPPQPEIIHSCIIQAGLGHNS 170
S+H + E + PL + L + + +LL + + + +H+ ++ G +
Sbjct: 153 SQHDQAEEALALFPLMLRRGLEPNQFTLSSLLKASGDGTTNKRGRQLHAYCLKCGYDSDV 212
Query: 171 FLGTKILNMYTKCGSIESAHKVFDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRD 350
++G+ +++MY + G + A +FD + +N +WN +I ++++G +A+ +F M R+
Sbjct: 213 YVGSSLVDMYARYGHLVEARLIFDGLVTKNEVSWNALIAGHSRKGETENALRLFSMMHRE 272
Query: 351 AIFKPNEFTYAAALSACAKKGGLGHG 428
FKP FT+++ +ACA G L G
Sbjct: 273 D-FKPTHFTFSSLCTACASTGSLEQG 297
>ref|XP_006468080.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like isoform X1 [Citrus sinensis]
gi|568827470|ref|XP_006468081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g20730-like isoform X2 [Citrus sinensis]
gi|568827472|ref|XP_006468082.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g20730-like isoform X3 [Citrus sinensis]
Length = 590
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/124 (39%), Positives = 71/124 (57%)
Frame = +3
Query: 57 LTTDDYLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKV 236
L Y++LL C + + Q +IH+ II G N L TK++ Y K G + SA V
Sbjct: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVVIFYAKVGDVVSARNV 87
Query: 237 FDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGG 416
FD+MSE N +W MI+ YA+ G +A+ +F MLR + + N+FTY++AL ACA+
Sbjct: 88 FDRMSERNVVSWTAMISGYAQNGYDENALLVFSAMLRAGV-RANQFTYSSALRACARMRW 146
Query: 417 LGHG 428
L G
Sbjct: 147 LQGG 150
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/111 (29%), Positives = 63/111 (56%)
Frame = +3
Query: 81 LLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEEN 260
+L++CA V S IH+ + +++ +G +++MY K G I A FD+M ++N
Sbjct: 340 MLNICANVASLSLGRQIHAFSFKYQSSYDAAVGNALIDMYAKSGEIADADHAFDEMGDKN 399
Query: 261 RTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKG 413
+W +I YAK G ++A+ ++++M + + PN+ T+ + L AC+ G
Sbjct: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTG 449
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/109 (31%), Positives = 59/109 (54%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
Y + L CA + ++ I + N F+ + +L++Y KCG IE A +F+++
Sbjct: 134 YSSALRACARMRWLQGGRMVQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSA 398
++ +WN MI A QG +D+ ++FR M+R + KP+ FT + L A
Sbjct: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSILRA 241
>ref|XP_006436374.1| hypothetical protein CICLE_v10031036mg [Citrus clementina]
gi|557538570|gb|ESR49614.1| hypothetical protein
CICLE_v10031036mg [Citrus clementina]
Length = 590
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/124 (38%), Positives = 70/124 (56%)
Frame = +3
Query: 57 LTTDDYLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKV 236
L Y++LL C + + Q +IH+ II G N L TK++ Y K G + SA K
Sbjct: 28 LDPSTYMSLLQFCIDKNAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
Query: 237 FDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGG 416
FD+M E N +W MI+ YA+ G +A+ +F MLR + + N+FTY++AL ACA+
Sbjct: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACARMRW 146
Query: 417 LGHG 428
L G
Sbjct: 147 LQGG 150
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/111 (29%), Positives = 65/111 (58%)
Frame = +3
Query: 81 LLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEEN 260
+L++CA V S IH+ + +++ +G +++MY K G I A++ FD+M ++N
Sbjct: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
Query: 261 RTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKG 413
+W +I YAK G ++A+ ++++M + + PN+ T+ + L AC+ G
Sbjct: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTG 449
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/109 (32%), Positives = 59/109 (54%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
Y + L CA + +I I + N F+ + +L++Y KCG IE A +F+++
Sbjct: 134 YSSALRACARMRWLQGGRMIQGGIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSA 398
++ +WN MI A QG +D+ ++FR M+R + KP+ FT + L A
Sbjct: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSILRA 241
>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum lycopersicum]
Length = 844
Score = 93.2 bits (230), Expect = 3e-17
Identities = 50/135 (37%), Positives = 82/135 (60%)
Frame = +3
Query: 24 ELMIPLQSKSYLTTDDYLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYT 203
EL + S+ + + +LL A VG+ + E IHS +++AG+ + + +++MY+
Sbjct: 459 ELFSHIDSEVGVDAFTFASLLSGAASVGAVGKGEQIHSRVLKAGIQSSQSVCNALISMYS 518
Query: 204 KCGSIESAHKVFDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYA 383
+CG+IE+A +VF+ M + N +W +IT +AK G + A+ +F +ML D I KPNE TY
Sbjct: 519 RCGNIEAAFQVFEGMEDRNVISWTSIITGFAKHGFAHRAVELFNQMLEDGI-KPNEVTYI 577
Query: 384 AALSACAKKGGLGHG 428
A LSAC+ G + G
Sbjct: 578 AVLSACSHVGLVDEG 592
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/114 (32%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKC---GSIESAHKVFD 242
+ +L CAE G +H +I++ L + +G +++MY K GS++ + KVFD
Sbjct: 270 FSGVLSACAEPGLSALGRQLHGGVIKSRLSADVCVGCSLVDMYAKSTMDGSMDDSRKVFD 329
Query: 243 KMSEENRTAWNLMITAYAKQGRCN-DAMFMFRRMLRDAIFKPNEFTYAAALSAC 401
+M++ N +W +IT Y ++G + +A+ ++ RM+ D + KPN FT+++ L AC
Sbjct: 330 RMADHNVMSWTAIITGYVQRGHYDMEAIKLYCRMI-DGLVKPNHFTFSSLLKAC 382
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +3
Query: 174 LGTKILNMYTKCGS-IESAHKVFDKMSEENRTAWNLMITAYAKQGRCNDAMFMFRRMLRD 350
+G +++++ K S + SA KVFD+M E N W LMIT +++ G DA+ +F M+ +
Sbjct: 202 VGCALIDLFAKGFSDLRSAKKVFDRMPERNLVTWTLMITRFSQLGASKDAVRLFLEMVSE 261
Query: 351 AIFKPNEFTYAAALSACAKKG 413
F P+ FT++ LSACA+ G
Sbjct: 262 G-FVPDRFTFSGVLSACAEPG 281
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/119 (26%), Positives = 63/119 (52%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
+ +LL C + +P E I++ ++ GL + + +++MY K G +E A K F+ +
Sbjct: 375 FSSLLKACGNLSNPAIGEQIYNHAVKLGLASVNCVANSLISMYAKSGRMEEARKAFELLF 434
Query: 252 EENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
E+N ++N+++ +K +A +F + D+ + FT+A+ LS A G +G G
Sbjct: 435 EKNLASYNIIVDGCSKSLDSAEAFELFSHI--DSEVGVDAFTFASLLSGAASVGAVGKG 491
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Frame = +3
Query: 72 YLNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMS 251
Y LL C + +++HS + + + ++ + ++++Y+K GS E+A K+F+ M
Sbjct: 65 YTVLLKSCIRTRNFQIGQLLHSKLNDSPIQPDTIVLNSLISLYSKMGSWETAEKIFESMG 124
Query: 252 EE-NRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSAC--AKKGGLG 422
E+ + +W+ MI+ YA G +++F F M+ + PN+F ++A + AC A+ G +G
Sbjct: 125 EKRDLVSWSAMISCYAHCGMELESVFTFYDMVEFGEY-PNQFCFSAVIQACCSAELGWVG 183
>emb|CBI40338.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 93.2 bits (230), Expect = 3e-17
Identities = 44/119 (36%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = +3
Query: 75 LNLLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSE 254
+N+L CA VG+ + + +H +++GL + F+G +++MY KCG +E A+KVF++M
Sbjct: 235 VNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKV 294
Query: 255 ENRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAI-FKPNEFTYAAALSACAKKGGLGHG 428
++ +WN M+T Y++ GR +DA+ +F ++ + I PN T + LS CA G L HG
Sbjct: 295 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNPNVVTLVSLLSGCALAGTLLHG 353
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +3
Query: 81 LLHLCAEVGSPPQPEIIHSCIIQAGLGHNSFLGTKILNMYTKCGSIESAHKVFDKMSEE- 257
+L C E+ S +H+ + +G N F+G +++MY +CG+ E+A +VFD+M E
Sbjct: 132 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 191
Query: 258 --NRTAWNLMITAYAKQGRCNDAMFMFRRMLRDAIFKPNEFTYAAALSACAKKGGLGHG 428
+ +WN ++ AY + G AM MF RM D +P+ + L ACA G G
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 250