BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026288
         (768 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002519996.1| hypothetical protein EpeqC_p062 (chloroplast...   103   5e-20
ref|YP_002519742.1| hypothetical protein GnpaC_p015 [Gnetum parv...    66   1e-08
ref|YP_002519736.1| hypothetical protein GnpaC_p007 [Gnetum parv...    66   1e-08
dbj|BAH11177.1| hypothetical protein (chloroplast) [Welwitschia ...    60   8e-07
ref|YP_001876619.1| hypothetical chloroplast RF2 [Welwitschia mi...    60   8e-07

>ref|YP_002519996.1| hypothetical protein EpeqC_p062 (chloroplast) [Ephedra equisetina]
           gi|222139940|ref|YP_002520008.1| hypothetical protein
           EpeqC_p074 (chloroplast) [Ephedra equisetina]
           gi|220983597|dbj|BAH11364.1| hypothetical protein
           (chloroplast) [Ephedra equisetina]
           gi|220983609|dbj|BAH11376.1| hypothetical protein
           (chloroplast) [Ephedra equisetina]
          Length = 2125

 Score =  103 bits (258), Expect = 5e-20
 Identities = 50/59 (84%), Positives = 53/59 (89%)
 Frame = +1

Query: 13  LFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTFAFAQSLFSELHKNRLRNQIFDTDKQ 189
           LFHFCRLKPIVLKR D+ TLLLTNPNQ+SANNTFAFAQSLF ELHKNRL NQIFD  K+
Sbjct: 323 LFHFCRLKPIVLKRTDRFTLLLTNPNQVSANNTFAFAQSLFYELHKNRLGNQIFDHRKK 381


>ref|YP_002519742.1| hypothetical protein GnpaC_p015 [Gnetum parvifolium]
           gi|512721616|ref|YP_008082235.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
           gi|512721622|ref|YP_008082241.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
           gi|220983484|dbj|BAH11252.1| hypothetical protein
           (chloroplast) [Gnetum parvifolium]
           gi|490345061|gb|AGL11081.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
           gi|490345067|gb|AGL11087.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
          Length = 2185

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
 Frame = +1

Query: 13  LFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTF--AFAQSLFSELHKNRLRNQIFDTDK 186
           LF FCRLKPIVLKR D+ TL LTNP+Q+SAN +    +   LF EL K +L NQIF   K
Sbjct: 358 LFGFCRLKPIVLKRTDRFTLSLTNPSQVSANTSAFDIYYSKLFDELQKQKLWNQIFHHRK 417

Query: 187 Q 189
           +
Sbjct: 418 K 418


>ref|YP_002519736.1| hypothetical protein GnpaC_p007 [Gnetum parvifolium]
           gi|220983478|dbj|BAH11246.1| hypothetical protein
           (chloroplast) [Gnetum parvifolium]
          Length = 2185

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
 Frame = +1

Query: 13  LFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTF--AFAQSLFSELHKNRLRNQIFDTDK 186
           LF FCRLKPIVLKR D+ TL LTNP+Q+SAN +    +   LF EL K +L NQIF   K
Sbjct: 358 LFGFCRLKPIVLKRTDRFTLSLTNPSQVSANTSAFDIYYSKLFDELQKQKLWNQIFHHRK 417

Query: 187 Q 189
           +
Sbjct: 418 K 418


>dbj|BAH11177.1| hypothetical protein (chloroplast) [Welwitschia mirabilis]
           gi|220983417|dbj|BAH11186.1| hypothetical protein
           (chloroplast) [Welwitschia mirabilis]
          Length = 2266

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
 Frame = +1

Query: 13  LFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTFAF---AQSLFSELHKNRLRNQIF 174
           LFHFCRLKPIVLKR D+ TL LTNP+++SA  TFAF      L  E+   R  NQIF
Sbjct: 337 LFHFCRLKPIVLKRTDRFTLSLTNPSRVSA-KTFAFDIETPHLSYEIPYKRFWNQIF 392


>ref|YP_001876619.1| hypothetical chloroplast RF2 [Welwitschia mirabilis]
           gi|187763154|ref|YP_001876628.1| hypothetical
           chloroplast RF2 [Welwitschia mirabilis]
           gi|163311674|gb|ABY26832.1| hypothetical chloroplast RF2
           [Welwitschia mirabilis] gi|163311684|gb|ABY26842.1|
           hypothetical chloroplast RF2 [Welwitschia mirabilis]
          Length = 2266

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
 Frame = +1

Query: 13  LFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTFAF---AQSLFSELHKNRLRNQIF 174
           LFHFCRLKPIVLKR D+ TL LTNP+++SA  TFAF      L  E+   R  NQIF
Sbjct: 337 LFHFCRLKPIVLKRTDRFTLSLTNPSRVSA-KTFAFDIETPHLSYEIPYKRFWNQIF 392