BLASTX nr result

ID: Ephedra27_contig00026177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026177
         (427 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76467.1| unknown [Picea sitchensis]                              67   3e-09
ref|XP_001780259.1| predicted protein [Physcomitrella patens] gi...    58   1e-06

>gb|ADE76467.1| unknown [Picea sitchensis]
          Length = 69

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -2

Query: 393 MDGPRGFVISPPPLTRRFFWMLGFRYDKSSNYMLYRGSAVNKTNSNLL*CSTK 235
           MDGP GF   PPPL RRFFWM+GFRYDK   +M+Y+G  ++  +++ L   TK
Sbjct: 1   MDGPSGFAAFPPPLARRFFWMIGFRYDKKFYFMVYQGKLLDNIDASSLDSDTK 53


>ref|XP_001780259.1| predicted protein [Physcomitrella patens]
           gi|162668313|gb|EDQ54923.1| predicted protein
           [Physcomitrella patens]
          Length = 236

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = -2

Query: 426 IVKYLAKGTRKMDGPRGFVISPPPLTRRFFWMLGFRYDKSSNYMLYRG 283
           IVK L +  +K  GP GF + PPP+ R+FFW++GFR D+    M YRG
Sbjct: 154 IVKRLVQEIKKKGGPSGFAVFPPPIARQFFWLIGFRSDRKYRLMGYRG 201


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