BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026154
         (1051 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ...   207   6e-51
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ...   207   6e-51
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   207   6e-51
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              207   6e-51
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ...   206   1e-50
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr...   205   2e-50
ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [A...   202   2e-49
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ...   199   1e-48
gb|EPS68498.1| hypothetical protein M569_06270, partial [Genlise...   199   2e-48
ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair ...   196   2e-47
ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair ...   196   2e-47
ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair ...   196   2e-47
ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair ...   196   2e-47
ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495...   194   4e-47
gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus pe...   193   1e-46
gb|ESW22599.1| hypothetical protein PHAVU_005G166100g [Phaseolus...   191   3e-46
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   191   3e-46
ref|XP_003561357.1| PREDICTED: uncharacterized protein LOC100836...   191   4e-46
ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304...   186   2e-44
gb|EOY26936.1| MMS19 nucleotide excision repair protein, putativ...   185   3e-44

>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Citrus sinensis]
          Length = 1151

 Score =  207 bits (527), Expect = 6e-51
 Identities = 124/335 (37%), Positives = 185/335 (55%), Gaps = 9/335 (2%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            ADW +L GAL+GCLALL+R++  G +T+ D   +A+SY++N+ VQ+L Q+DR        
Sbjct: 97   ADWKALRGALVGCLALLRRKSSGGVITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLE 156

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSE---NSAADL 352
                 Y DAV+SL EDL+  +C AID EKDP CL+  F IV +  +    +   N A+DL
Sbjct: 157  CLLQRYPDAVVSLGEDLLYAICEAIDGEKDPHCLMLTFHIVEVAAELFSDDLLANFASDL 216

Query: 353  FDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLVTA 532
            F+I+  YFPI F   + +   +  +DLS AL+ AF S+ LF P  IPL LEKLSSSL +A
Sbjct: 217  FEILGCYFPIHFTHSKAEDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSA 276

Query: 533  KIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWSNKKPXXXXXXXXXXXL---YQVA 703
            K++SLKYL  C+  YG D I   A A+W+S+K+  +S+ +P           +     V 
Sbjct: 277  KVDSLKYLSHCTVKYGADRIEKHAKAMWSSIKDAVYSSHEPTLSFASESLDGVGFRENVI 336

Query: 704  LT---CLTDCAFAFQKEKEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTVEPEAK 874
            LT    L D  F    ++  G+             +FKS+      + +S+++  + +  
Sbjct: 337  LTESLNLLDTVF----KQNSGLFLSWIIGDEDINLIFKSISSYKTYKEISLQS--KQKLH 390

Query: 875  VFGRFLYAAAISTPVSCFSVCKRFLPPLLDLLVIS 979
              G  L  +A ++P +C SV + F P L+  L +S
Sbjct: 391  AVGSILSVSAKASPAACNSVMESFFPCLMHALGLS 425


>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Citrus sinensis]
          Length = 1155

 Score =  207 bits (527), Expect = 6e-51
 Identities = 124/335 (37%), Positives = 185/335 (55%), Gaps = 9/335 (2%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            ADW +L GAL+GCLALL+R++  G +T+ D   +A+SY++N+ VQ+L Q+DR        
Sbjct: 97   ADWKALRGALVGCLALLRRKSSGGVITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLE 156

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSE---NSAADL 352
                 Y DAV+SL EDL+  +C AID EKDP CL+  F IV +  +    +   N A+DL
Sbjct: 157  CLLQRYPDAVVSLGEDLLYAICEAIDGEKDPHCLMLTFHIVEVAAELFSDDLLANFASDL 216

Query: 353  FDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLVTA 532
            F+I+  YFPI F   + +   +  +DLS AL+ AF S+ LF P  IPL LEKLSSSL +A
Sbjct: 217  FEILGCYFPIHFTHSKAEDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSA 276

Query: 533  KIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWSNKKPXXXXXXXXXXXL---YQVA 703
            K++SLKYL  C+  YG D I   A A+W+S+K+  +S+ +P           +     V 
Sbjct: 277  KVDSLKYLSHCTVKYGADRIEKHAKAMWSSIKDAVYSSHEPTLSFASESLDGVGFRENVI 336

Query: 704  LT---CLTDCAFAFQKEKEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTVEPEAK 874
            LT    L D  F    ++  G+             +FKS+      + +S+++  + +  
Sbjct: 337  LTESLNLLDTVF----KQNSGLFLSWIIGDEDINLIFKSISSYKTYKEISLQS--KQKLH 390

Query: 875  VFGRFLYAAAISTPVSCFSVCKRFLPPLLDLLVIS 979
              G  L  +A ++P +C SV + F P L+  L +S
Sbjct: 391  AVGSILSVSAKASPAACNSVMESFFPCLMHALGLS 425


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score =  207 bits (527), Expect = 6e-51
 Identities = 126/337 (37%), Positives = 180/337 (53%), Gaps = 8/337 (2%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            ADW +L GAL+GCLAL++R+T +G ++  D   +A+SY +N+ VQ+L Q+DR        
Sbjct: 97   ADWKALRGALVGCLALMRRKTNVGSISQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLA 156

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPS-----ENSAA 346
               + Y DAV+SL +DL+ G+C AID EKDP CLL  FRIV LV K  P       +S++
Sbjct: 157  CLLEHYPDAVVSLGDDLVYGICEAIDGEKDPHCLLLTFRIVELVAKLFPDPTGALASSSS 216

Query: 347  DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
            DLF+ +  YFPI F   + +   +   DLS+AL+ AF S+PLF P  IPL LEKLSSSL 
Sbjct: 217  DLFEFLGCYFPIHFTHGKEEDIDVRRNDLSHALMRAFSSTPLFEPFAIPLLLEKLSSSLP 276

Query: 527  TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKN-EFWSNKKPXXXXXXXXXXXLYQVA 703
             AKI+SLKYL  C+  YG D +   ++AIW+S+K   F S  +P                
Sbjct: 277  LAKIDSLKYLSDCTVKYGADRMKKHSEAIWSSVKEIIFTSIGQPNLSINTESLNSPSFQE 336

Query: 704  LTCLTDCAFAFQK--EKEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTVEPEAKV 877
                T+     QK      G+            ++F  + I T  +   +++        
Sbjct: 337  NEMTTEALRLLQKMVVASNGLFLTLIINDEDVKDIFNILNIYTCYKDFPLQS--RQRLNA 394

Query: 878  FGRFLYAAAISTPVSCFSVCKRFLPPLLDLLVISYNQ 988
             G  LY +A ++  SC  V + +   LLD + IS +Q
Sbjct: 395  VGHILYTSASASVASCDHVFESYFHRLLDFMGISVDQ 431


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  207 bits (527), Expect = 6e-51
 Identities = 123/334 (36%), Positives = 180/334 (53%), Gaps = 8/334 (2%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            ADW +L GALIGCLAL+KR++ MG+VT  D   +A++Y+EN+ VQ+L Q+DR        
Sbjct: 97   ADWRALRGALIGCLALMKRKSNMGRVTDNDARAVAQAYLENVQVQSLGQHDRKLCFEILE 156

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
               D Y ++V SL +DL+ G+C AID EKDPRCL+  F IV ++ +  P  +      A 
Sbjct: 157  CLLDHYPESVASLGDDLVYGICGAIDGEKDPRCLMLTFHIVEILARLFPDPSGPLASFAG 216

Query: 347  DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
            DLFDI+  YFPI F  P+ +   +  +DLS AL+ AF S+ LF P  IPL LEKLSSSL 
Sbjct: 217  DLFDILGCYFPIHFTHPQGEDVDVKRDDLSRALMLAFSSTTLFEPFAIPLLLEKLSSSLP 276

Query: 527  TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNE-FWSNKKPXXXXXXXXXXXLYQVA 703
             AK++SLKYL  C   YG D ++   +AIW S+K+  F S ++P           +    
Sbjct: 277  LAKVDSLKYLSNCLLKYGDDRMTKHVEAIWFSVKDAIFCSEQEPMLSLASELLDHVGFQE 336

Query: 704  LTCLTDCAFAFQKE--KEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTVEPEAKV 877
               +T+     QK   +  G+             +  +V        + +++  + +   
Sbjct: 337  NEIVTEAIILLQKVILENSGLSLSLIVGDKDINTIVNTVTSFRSYNDIPLQS--KHKLCA 394

Query: 878  FGRFLYAAAISTPVSCFSVCKRFLPPLLDLLVIS 979
             GR LY +A ++   C  V + F   L+D L +S
Sbjct: 395  IGRILYVSAKASITCCNRVFESFFFRLMDTLGLS 428


>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Solanum lycopersicum]
          Length = 1153

 Score =  206 bits (524), Expect = 1e-50
 Identities = 103/220 (46%), Positives = 145/220 (65%), Gaps = 5/220 (2%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           ADW +LHGAL+GCLALL+R+T +G ++      +A SY++ + VQ+L Q+DR        
Sbjct: 112 ADWKALHGALVGCLALLRRKTGVGMISRSQAKAVAESYLKTLQVQSLGQHDRKLCLQILE 171

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPS-----ENSAA 346
              D Y DA+ SL +DL+ G+C AID EKDP+CL+ +F IV L+ +  P      EN A 
Sbjct: 172 CLLDRYRDALFSLGDDLVYGICEAIDGEKDPQCLMLIFHIVELLAQLFPEASGPLENFAG 231

Query: 347 DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
           DLF+I+  YFPI F  P++D   I  E+LS AL+ AF S+PLF P  IPL L+KLSSSL 
Sbjct: 232 DLFEILECYFPIHFTHPKSDDVDIKREELSRALMLAFASTPLFEPSVIPLLLDKLSSSLP 291

Query: 527 TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWSN 646
           +AK+ESLKYL  C+  YGGD +     ++W++LK+  +++
Sbjct: 292 SAKVESLKYLSFCTLKYGGDRMEKYTKSLWSALKDALFTS 331


>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
            gi|557528866|gb|ESR40116.1| hypothetical protein
            CICLE_v10024743mg [Citrus clementina]
          Length = 1155

 Score =  205 bits (522), Expect = 2e-50
 Identities = 123/335 (36%), Positives = 184/335 (54%), Gaps = 9/335 (2%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            ADW +L GAL+GCLALL+R++  G +T+ D   +A+SY++N+ VQ+L Q+DR        
Sbjct: 97   ADWKALRGALVGCLALLRRKSSGGVITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLE 156

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSE---NSAADL 352
                 Y DAV+SL EDL+  +C A+D EKDP CL+  F IV +  +    +   N A DL
Sbjct: 157  CLLQRYPDAVVSLGEDLLYAICEAVDGEKDPHCLMLTFHIVEVAAELFSDDLLANFAGDL 216

Query: 353  FDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLVTA 532
            F+I+  YFPI F   + +   +  +DLS AL+ AF S+ LF P  IPL LEKLSSSL +A
Sbjct: 217  FEILGCYFPIHFTHSKAEDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSA 276

Query: 533  KIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWSNKKPXXXXXXXXXXXL---YQVA 703
            K++SLKYL  C+  YG D I   A A+W+S+K+  +S+ +P           +     V 
Sbjct: 277  KVDSLKYLSHCTVKYGADRIEKHAKAMWSSIKDAIYSSHEPTLSFASESLDGVGFRDNVI 336

Query: 704  LT---CLTDCAFAFQKEKEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTVEPEAK 874
            LT    L D  F    ++  G+             +FKS+      + +S+++  + +  
Sbjct: 337  LTESLNLLDTVF----KQNSGLFLSWIIGDEDINLIFKSISSFKTYKEISLQS--KQKLH 390

Query: 875  VFGRFLYAAAISTPVSCFSVCKRFLPPLLDLLVIS 979
              G  L  +A ++P +C SV + F P L+  L +S
Sbjct: 391  AVGSILSVSAKASPAACNSVMESFFPCLMHPLGLS 425


>ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
           gi|548857353|gb|ERN15159.1| hypothetical protein
           AMTR_s00056p00136660 [Amborella trichopoda]
          Length = 1160

 Score =  202 bits (513), Expect = 2e-49
 Identities = 110/259 (42%), Positives = 152/259 (58%), Gaps = 9/259 (3%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           ADW +L GA IGCLALL+R++  G ++  D+  L +S++ NI VQAL  +DR+       
Sbjct: 97  ADWQALRGAFIGCLALLRRKSHTGTISDNDLINLTKSFLLNIQVQALALHDRLLCLELLE 156

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENSAADLFDI 361
              D +   +  L+++L+ GV AAIDEEKDPRCL+ VF +V L+++  P  + A D FDI
Sbjct: 157 CLLDQFPSVISVLDDELVYGVLAAIDEEKDPRCLMLVFHVVELLVQVFPDPSVAKDAFDI 216

Query: 362 ISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLVTAKIE 541
           + RYFPI F  P  D   I  EDLS  ++ AF SSPLF P  IPL LEKLSSSL  AK++
Sbjct: 217 LGRYFPIYFTRPNVDAIDIKREDLSRRMMNAFSSSPLFEPFCIPLLLEKLSSSLEMAKLD 276

Query: 542 SLKYLGKCSKSYGGDAISNQADAIWTSLKNEFW--SNKKPXXXXXXXXXXXL-------Y 694
           +LKYL  C+  YG   +++ A AIW++LK+  +  S+  P           L        
Sbjct: 277 ALKYLSHCAPRYGPSRMASHAYAIWSALKDVIFNLSSHGPSISIICELPDNLGSQENEVV 336

Query: 695 QVALTCLTDCAFAFQKEKE 751
           + AL CL +C   F   K+
Sbjct: 337 KEALVCLENCVLVFDIPKD 355


>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Solanum tuberosum]
          Length = 1170

 Score =  199 bits (507), Expect = 1e-48
 Identities = 100/219 (45%), Positives = 140/219 (63%), Gaps = 5/219 (2%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           ADW +LHGAL+GCLALL+R+T  G +       +A SY++ + VQ+L Q DR        
Sbjct: 99  ADWKALHGALVGCLALLRRKTGTGMINRSQAKAVAESYLKTLQVQSLGQQDRKLCLQILE 158

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPS-----ENSAA 346
              D Y DA+ SL +DL+ G+C AID EKDP+CL+ +F IV L+ +  P      EN A 
Sbjct: 159 CLLDRYRDALFSLGDDLVYGICEAIDGEKDPQCLMLIFHIVELLAQLFPEASGPLENFAG 218

Query: 347 DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
           DLF+I+  YFPI F  P++D   +   +LS AL+ AF S+PL+ P  IPL L+KLSSSL 
Sbjct: 219 DLFEILECYFPIHFTHPKSDDVDMKRGELSRALMLAFASTPLYEPSVIPLLLDKLSSSLP 278

Query: 527 TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWS 643
           +AK+ESLKYL  C+  YGGD +     ++W++LK+  ++
Sbjct: 279 SAKVESLKYLSYCTLKYGGDRMEKYTKSLWSALKDALFT 317


>gb|EPS68498.1| hypothetical protein M569_06270, partial [Genlisea aurea]
          Length = 970

 Score =  199 bits (506), Expect = 2e-48
 Identities = 121/332 (36%), Positives = 181/332 (54%), Gaps = 6/332 (1%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            ADW +L GAL+GCLALL+R+ ++G ++  +   +A+SY++++ VQAL Q+DR        
Sbjct: 34   ADWKALRGALVGCLALLRRKADVGGISGSEAKAIAQSYIQHLQVQALGQHDRKLSLQLLE 93

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMK-----NLPSENSAA 346
               DCY  AV  L ++L+ G+C AID EKDP+CLL VF IV ++ +     + P  N A 
Sbjct: 94   CLLDCYFSAVADLGDNLVYGICGAIDGEKDPQCLLIVFSIVEILGRLYSGSSGPLVNYAE 153

Query: 347  DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
            +LF++I  YFPI F  P+ D+     ++LS AL+ AF S+PLF P +IPL LEK SS+L 
Sbjct: 154  ELFEVIGSYFPIHFTHPKGDEDDRKRQELSRALMMAFASTPLFEPFSIPLLLEKFSSTLP 213

Query: 527  TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWSNKKPXXXXXXXXXXXLYQVAL 706
            +AK+ES++YL  CS  YG D ++  ++A+W+S+K+  + +  P                 
Sbjct: 214  SAKLESIRYLCYCSVKYGQDRMAKHSEALWSSVKDTVYFS--PDSTLSMESQSDALNFRE 271

Query: 707  TCLTDCAFAFQKE-KEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTVEPEAKVFG 883
            + +   AFA  +E                  NVF +  +    E   I   V+      G
Sbjct: 272  SDIMIQAFALLREINLQNGDFINLVIQDGDMNVFLN-SLNQYREFDDIPLKVKQRLHSVG 330

Query: 884  RFLYAAAISTPVSCFSVCKRFLPPLLDLLVIS 979
            R   A A ++  SC  V +RF P L+D L  S
Sbjct: 331  RIFSACAETSAASCSKVFERFFPLLMDGLGFS 362


>ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X4 [Glycine max]
          Length = 1095

 Score =  196 bits (497), Expect = 2e-47
 Identities = 103/215 (47%), Positives = 138/215 (64%), Gaps = 5/215 (2%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           ADW ++ GAL+GCLAL++R++ +G VT  D T +A+S+++ + VQ+L Q DR        
Sbjct: 97  ADWRAVQGALVGCLALIRRKSVVGMVTDSDATTIAQSFLQYMQVQSLGQYDRKLCFELLD 156

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
              + Y DAV +L EDLI G+C AID EKDP CL   F IV  + +  P  +S     A 
Sbjct: 157 CLLERYFDAVTTLGEDLIYGICEAIDAEKDPDCLKLAFHIVASLAQLNPDSSSLLASYAK 216

Query: 347 DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
           D+FDI+  YFPI F  P +    +  +DLS +L+ AF S+PLF P  IPL LEKLSSSL 
Sbjct: 217 DVFDILEPYFPIHFTHPSSGDTHVQRDDLSTSLMSAFSSTPLFEPFVIPLLLEKLSSSLH 276

Query: 527 TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKN 631
           +AKI+SLKYL  CS  YG + I+  A AIW+SLK+
Sbjct: 277 SAKIDSLKYLRVCSSKYGAERIAKYAGAIWSSLKD 311


>ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X3 [Glycine max]
          Length = 1102

 Score =  196 bits (497), Expect = 2e-47
 Identities = 103/215 (47%), Positives = 138/215 (64%), Gaps = 5/215 (2%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           ADW ++ GAL+GCLAL++R++ +G VT  D T +A+S+++ + VQ+L Q DR        
Sbjct: 97  ADWRAVQGALVGCLALIRRKSVVGMVTDSDATTIAQSFLQYMQVQSLGQYDRKLCFELLD 156

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
              + Y DAV +L EDLI G+C AID EKDP CL   F IV  + +  P  +S     A 
Sbjct: 157 CLLERYFDAVTTLGEDLIYGICEAIDAEKDPDCLKLAFHIVASLAQLNPDSSSLLASYAK 216

Query: 347 DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
           D+FDI+  YFPI F  P +    +  +DLS +L+ AF S+PLF P  IPL LEKLSSSL 
Sbjct: 217 DVFDILEPYFPIHFTHPSSGDTHVQRDDLSTSLMSAFSSTPLFEPFVIPLLLEKLSSSLH 276

Query: 527 TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKN 631
           +AKI+SLKYL  CS  YG + I+  A AIW+SLK+
Sbjct: 277 SAKIDSLKYLRVCSSKYGAERIAKYAGAIWSSLKD 311


>ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X2 [Glycine max]
          Length = 1133

 Score =  196 bits (497), Expect = 2e-47
 Identities = 103/215 (47%), Positives = 138/215 (64%), Gaps = 5/215 (2%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           ADW ++ GAL+GCLAL++R++ +G VT  D T +A+S+++ + VQ+L Q DR        
Sbjct: 97  ADWRAVQGALVGCLALIRRKSVVGMVTDSDATTIAQSFLQYMQVQSLGQYDRKLCFELLD 156

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
              + Y DAV +L EDLI G+C AID EKDP CL   F IV  + +  P  +S     A 
Sbjct: 157 CLLERYFDAVTTLGEDLIYGICEAIDAEKDPDCLKLAFHIVASLAQLNPDSSSLLASYAK 216

Query: 347 DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
           D+FDI+  YFPI F  P +    +  +DLS +L+ AF S+PLF P  IPL LEKLSSSL 
Sbjct: 217 DVFDILEPYFPIHFTHPSSGDTHVQRDDLSTSLMSAFSSTPLFEPFVIPLLLEKLSSSLH 276

Query: 527 TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKN 631
           +AKI+SLKYL  CS  YG + I+  A AIW+SLK+
Sbjct: 277 SAKIDSLKYLRVCSSKYGAERIAKYAGAIWSSLKD 311


>ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X1 [Glycine max]
          Length = 1135

 Score =  196 bits (497), Expect = 2e-47
 Identities = 103/215 (47%), Positives = 138/215 (64%), Gaps = 5/215 (2%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           ADW ++ GAL+GCLAL++R++ +G VT  D T +A+S+++ + VQ+L Q DR        
Sbjct: 97  ADWRAVQGALVGCLALIRRKSVVGMVTDSDATTIAQSFLQYMQVQSLGQYDRKLCFELLD 156

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
              + Y DAV +L EDLI G+C AID EKDP CL   F IV  + +  P  +S     A 
Sbjct: 157 CLLERYFDAVTTLGEDLIYGICEAIDAEKDPDCLKLAFHIVASLAQLNPDSSSLLASYAK 216

Query: 347 DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
           D+FDI+  YFPI F  P +    +  +DLS +L+ AF S+PLF P  IPL LEKLSSSL 
Sbjct: 217 DVFDILEPYFPIHFTHPSSGDTHVQRDDLSTSLMSAFSSTPLFEPFVIPLLLEKLSSSLH 276

Query: 527 TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKN 631
           +AKI+SLKYL  CS  YG + I+  A AIW+SLK+
Sbjct: 277 SAKIDSLKYLRVCSSKYGAERIAKYAGAIWSSLKD 311


>ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495813 [Cicer arietinum]
          Length = 1138

 Score =  194 bits (494), Expect = 4e-47
 Identities = 100/219 (45%), Positives = 139/219 (63%), Gaps = 5/219 (2%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           ADW ++ GAL+GCLAL++R++  G VT  D   +A+S+++ + VQ+L   DR        
Sbjct: 97  ADWKAVRGALVGCLALIRRKSVAGMVTGSDAKAIAQSFLQYLQVQSLGHYDRKLCFELLD 156

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
              + + DAV SLEEDLI G+C AID EKDP CL+  F IV  + +  P  +      A+
Sbjct: 157 FLLEHHADAVASLEEDLIYGICEAIDAEKDPECLMLAFHIVESLARLYPDPSGLLASFAS 216

Query: 347 DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
           D+FDI++ YFPI F  P +    +  +DLS  L+ AF S+PLF P  IPL LEKLSSSL 
Sbjct: 217 DVFDILAPYFPIHFTHPSSGDTHVQRDDLSKILMSAFSSTPLFEPFVIPLLLEKLSSSLH 276

Query: 527 TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWS 643
           +AKI+SL+YL  CS  YG + I+  A AIW+SLK+  ++
Sbjct: 277 SAKIDSLQYLRVCSSKYGAERIAKYAGAIWSSLKDTLYT 315


>gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
          Length = 1158

 Score =  193 bits (490), Expect = 1e-46
 Identities = 120/353 (33%), Positives = 180/353 (50%), Gaps = 8/353 (2%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            ADW +L GAL+GCLALL+R+   G V++ D   +A+SY+E++ VQ+L Q+DR        
Sbjct: 97   ADWRALRGALVGCLALLRRKVNAGMVSASDGKLVAQSYIESLQVQSLGQHDRKLCFELLE 156

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENSA-----A 346
               + + + + SL E    G+C A+D EKDP CL+  F IV  +++  P  + +      
Sbjct: 157  CLLERHPNEIASLGETFFYGICQAMDGEKDPHCLMLTFPIVETLVRIYPDPSGSLASFCG 216

Query: 347  DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
            DLF+++  YFPI F   +++  ++  +DLS AL+ AF S+PLF P  IPL LEKLSSSL 
Sbjct: 217  DLFELLGSYFPIHFTHLKDEDAEVKRDDLSKALMSAFSSTPLFEPFVIPLLLEKLSSSLP 276

Query: 527  TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWSN-KKPXXXXXXXXXXXLYQVA 703
             AK++SLKYL  C+  YG D ++  A AIW SLK+   ++ +KP           L    
Sbjct: 277  LAKVDSLKYLNHCTAKYGADRMAKHAGAIWISLKDAISNSLEKPDMSFTSEPLYGLGFQE 336

Query: 704  LTCLTDCAFAFQKE--KEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTVEPEAKV 877
                T+     QK   +   +             VF S+        + ++   +     
Sbjct: 337  NEIATEALMLLQKVTLQNEALFLSLIIQDEGINIVFNSIASHEHYNNIPLQG--KQWLHA 394

Query: 878  FGRFLYAAAISTPVSCFSVCKRFLPPLLDLLVISYNQNCPVPCTKEVEIRSKK 1036
             GR LY  + ++  SC SV + F P L++ L IS   +       E    SKK
Sbjct: 395  VGRILYIISKTSMASCNSVFESFFPRLMNTLEISVTNSAGDCTLNENTFPSKK 447


>gb|ESW22599.1| hypothetical protein PHAVU_005G166100g [Phaseolus vulgaris]
          Length = 1145

 Score =  191 bits (486), Expect = 3e-46
 Identities = 124/340 (36%), Positives = 177/340 (52%), Gaps = 14/340 (4%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            ADW ++ GAL+GCLAL++R++ +G VTS D   +A+S+ + + VQ+L Q+DR        
Sbjct: 98   ADWRAVRGALLGCLALIRRKSVLGIVTSTDAKAIAQSFFQYMQVQSLGQSDRKLCFELLD 157

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
               + Y DA+  L + LI G+C AID EKDP CL+  F IV    +  P  +      A 
Sbjct: 158  CLLEHYPDAITPLGDGLIYGICEAIDAEKDPECLMLAFHIVQSWAQLYPESSGLLATYAK 217

Query: 347  DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
            D+FDI+  YFPI F  P N    +  +DLS +L+ AF S+PLF P  IPL LEKLSSSL 
Sbjct: 218  DVFDILEPYFPIHFTHPTNADTPVQRDDLSRSLMSAFSSTPLFEPFVIPLLLEKLSSSLH 277

Query: 527  TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKN---------EFWSNKKPXXXXXXXX 679
            +AKI+SLKYL  CS  YG + I+  A++IW+S+K+         +F  N  P        
Sbjct: 278  SAKIDSLKYLRVCSSKYGAERIAKYANSIWSSIKDILSTYLGEPDFSLNIAPADGIGFPE 337

Query: 680  XXXLYQVALTCLTDCAFAFQKEKEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTV 859
               + + AL+ L       Q   +               N+F + I   E    +I    
Sbjct: 338  NEFVVE-ALSLLQ------QLIVQNSSLLVCLIVDDEDVNIFFNTIASYEIYD-AIPVQE 389

Query: 860  EPEAKVFGRFLYAAAISTPVSCFSVCKRFLPPLLDLLVIS 979
            + +    GR LY AA ST  SC +V +     ++D L +S
Sbjct: 390  KKKLHAIGRILYIAAKSTVTSCNAVFESLFSKIMDNLGVS 429


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score =  191 bits (486), Expect = 3e-46
 Identities = 125/343 (36%), Positives = 175/343 (51%), Gaps = 18/343 (5%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            ADW +L GAL+GCLAL++RR+  G +T  D   +A SY++N+ VQ+L Q DR        
Sbjct: 97   ADWRALRGALVGCLALIRRRSN-GIITGIDAKVVAESYLQNLQVQSLAQYDRKLCFELLE 155

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
               +    AV SL EDLI G+C AID EKDP+CL+  F IV ++ K  P  +      A 
Sbjct: 156  CLLENCPAAVASLGEDLIYGICEAIDGEKDPQCLMLTFHIVEVLGKLFPDPSGPFSSFAG 215

Query: 347  DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
            D+F I+  YFPI F  P+ +   +  +DLS AL+ AF S+PLF P  +PL LEKLSSSL 
Sbjct: 216  DIFSILGCYFPIHFTHPKAEDVDVKRDDLSRALMLAFSSTPLFEPFAMPLLLEKLSSSLP 275

Query: 527  TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWSNKKPXXXXXXXXXXXLYQVAL 706
            TAK++SLKYL  C+  +  D I+  A AIW+SLK+  +S+ +                  
Sbjct: 276  TAKVDSLKYLSYCTLKFRADRIAEHAGAIWSSLKDAIYSSGEEPMLSSDLES-------- 327

Query: 707  TCLTDCAFAFQKEKEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTV--------- 859
                D   + + E                 N F S+II  E E   I NT+         
Sbjct: 328  ---VDSPGSEKNEIATEALLLLENLIVQNNNFFLSMIISDE-EVKMIFNTITSYKSYNEI 383

Query: 860  ----EPEAKVFGRFLYAAAISTPVSCFSVCKRFLPPLLDLLVI 976
                + +  + GR LY  A  +  SC  + + + P L++ L I
Sbjct: 384  SLQSKQKLHMVGRILYVCAKVSVSSCNRIFESYFPRLMEALGI 426


>ref|XP_003561357.1| PREDICTED: uncharacterized protein LOC100836414 [Brachypodium
           distachyon]
          Length = 1140

 Score =  191 bits (485), Expect = 4e-46
 Identities = 97/219 (44%), Positives = 132/219 (60%), Gaps = 5/219 (2%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           +DW +L GAL+GCLALL R+  +G +   DV +L  S++E I VQ+L   DR        
Sbjct: 97  SDWQALRGALVGCLALLHRKPSVGSIVISDVKRLVESFLEYIQVQSLAAADRKLCFQILC 156

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
              + Y +AV +++++L+CG+C  IDEEKDP CL   F +V  VMK  P  +      A+
Sbjct: 157 CVLNDYPEAVKTMDDELLCGICQTIDEEKDPECLKLSFHLVEAVMKLFPDPSGLAAQFAS 216

Query: 347 DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
           DLF+I+S YFP+ F    +D    T +DLS AL+ AF S+P F P  IPL L+KLSSSL 
Sbjct: 217 DLFEILSNYFPVYFTHEASDNLGATRDDLSRALMHAFCSTPFFEPFAIPLLLDKLSSSLP 276

Query: 527 TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWS 643
            AK++SLKYL  C   YG D +     AIW+ LK   +S
Sbjct: 277 LAKLDSLKYLDNCISCYGADRMVRHTSAIWSKLKEVLFS 315


>ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304108 [Fragaria vesca
            subsp. vesca]
          Length = 1149

 Score =  186 bits (471), Expect = 2e-44
 Identities = 121/353 (34%), Positives = 170/353 (48%), Gaps = 8/353 (2%)
 Frame = +2

Query: 2    ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
            +DW +L GALIGCLALL+R+   G V++ D   +A+SY ENI VQ+L Q DR        
Sbjct: 97   SDWRALRGALIGCLALLRRQVNAGMVSASDAKVVAQSYRENIPVQSLAQQDRKLCFELLE 156

Query: 182  XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSENS-----AA 346
                 Y + V SL EDL   +  AIDEEKDP CL+  F IV  ++K  P  +        
Sbjct: 157  CLLQRYPNEVASLGEDLFYAISEAIDEEKDPHCLILTFHIVEALVKLFPDPSGPLATFCG 216

Query: 347  DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
            DLF+ +  YFPI F   +++   +  EDLS AL+ AF S+ LF P  IPL LEKLSSSL 
Sbjct: 217  DLFEFLGCYFPIHFTHLKDEDANVKREDLSKALMSAFSSTALFEPFVIPLLLEKLSSSLP 276

Query: 527  TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWSN-KKPXXXXXXXXXXXLYQVA 703
             AK++SLKYL  C+  YG + ++  A+ IW S+K+   ++ + P           L    
Sbjct: 277  LAKVDSLKYLNYCASRYGAERMAKHAETIWISIKHAISNSLEVPAKSFTAEPLVGLGFEE 336

Query: 704  LTCLTDCAFAFQK--EKEPGVXXXXXXXXXXXXNVFKSVIIKTEAETLSIENTVEPEAKV 877
               +T+     Q    +   +            NV  S  I +     +I +        
Sbjct: 337  NEIVTEALILLQNVTMQNDALLLSLIVRDEDINNVINS--IASHESYTNIPSQGRQSLHA 394

Query: 878  FGRFLYAAAISTPVSCFSVCKRFLPPLLDLLVISYNQNCPVPCTKEVEIRSKK 1036
             GR  +    ++  SC  V + F P L+  L IS   +      KE    SK+
Sbjct: 395  VGRIFFIITKTSMASCNRVFESFFPSLMKTLEISMGNSSKDCTLKENSFSSKR 447


>gb|EOY26936.1| MMS19 nucleotide excision repair protein, putative isoform 5
           [Theobroma cacao]
          Length = 1157

 Score =  185 bits (469), Expect = 3e-44
 Identities = 92/220 (41%), Positives = 141/220 (64%), Gaps = 5/220 (2%)
 Frame = +2

Query: 2   ADWPSLHGALIGCLALLKRRTEMGKVTSEDVTKLARSYVENISVQALVQNDRMXXXXXXX 181
           ADW +L GAL+GCLALL+R++  G V+  D   +A SY++N+ VQ+L + DR        
Sbjct: 97  ADWRALRGALVGCLALLRRKSSGGIVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLL 156

Query: 182 XXXDCYTDAVLSLEEDLICGVCAAIDEEKDPRCLLSVFRIVGLVMKNLPSE-----NSAA 346
              + Y  A+ SL ++LI G+C A+D EKDP CL+ +F I+ ++ +  P       + A 
Sbjct: 157 CLLERYPKAIASLGDNLIYGICEAVDGEKDPHCLMLIFHIIEILPQLFPDPLGPFTSFAH 216

Query: 347 DLFDIISRYFPISFRPPENDKPQITSEDLSNALLEAFMSSPLFAPHTIPLFLEKLSSSLV 526
           DLF+ +S YFP+ F  P+ +   I  +DL+ AL+ AF S+PLF P  IPL +EKLSSSL 
Sbjct: 217 DLFENLSYYFPVHFTHPKGEDVNIKRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLP 276

Query: 527 TAKIESLKYLGKCSKSYGGDAISNQADAIWTSLKNEFWSN 646
           +AK++SL+YL  C+  YG D ++   +A+W+SLK+  +++
Sbjct: 277 SAKVDSLRYLSDCTVKYGVDRMAKHGEALWSSLKDAVFTS 316