BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00026121
         (1672 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...   481   e-133
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   447   e-123
ref|XP_004972829.1| PREDICTED: probable RNA polymerase II transc...   431   e-118
ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transc...   423   e-115
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g...   421   e-115
ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [S...   420   e-115
gb|ACG24327.1| BSD domain containing protein [Zea mays]               419   e-114
gb|AFW61224.1| BSD domain containing protein [Zea mays]               419   e-114
dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]    418   e-114
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr...   417   e-114
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   417   e-114
dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]    417   e-114
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc...   417   e-114
ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transc...   413   e-112
ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transc...   412   e-112
gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indi...   409   e-111
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr...   404   e-110
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   404   e-110
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   403   e-109
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc...   400   e-109

>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
            gi|548861733|gb|ERN19104.1| hypothetical protein
            AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  481 bits (1238), Expect = e-133
 Identities = 268/571 (46%), Positives = 365/571 (63%), Gaps = 24/571 (4%)
 Frame = +3

Query: 27   DPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSKHGSKQALLNLIRDPSA 206
            DPGV G L + +  F+F P+DP  S+++KL V FR I+G KFSK GSKQALLNL +D   
Sbjct: 19   DPGVAGVLTMRDDSFIFRPNDP--SSSVKLDVSFRCIKGHKFSKEGSKQALLNLTQD--- 73

Query: 207  KRAGFIFEFDSFESRDVCRDLVGEILRN-------------------NQNVCQLTKAEAE 329
            K  G++FEF +F+ RDVCRDLVG +L                      Q+  QL+ AE E
Sbjct: 74   KGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQSAQVVPAQPTTQHDNQLSMAEME 133

Query: 330  LTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAV--STRQRKGLKSVMLTDF 503
                LL++DS+L+KL+ +LV   +LTE EFW TRK+LLD+A   +++QR G KS ML D 
Sbjct: 134  QRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASKQRAGFKSAMLADV 193

Query: 504  SPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYRT 683
             P+ DG++NKVTF L PE IHQIFAEKPAV +A+L  VP KM E +FW KYCR+EYL+RT
Sbjct: 194  RPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWTKYCRAEYLHRT 253

Query: 684  DNXXXXXXXXXXXXXXXQFLD-DESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGTA 860
             N                FL  D+ L +EAR KIR+VDP VDMA +  DDYSHL GHG  
Sbjct: 254  KNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDYSHLPGHGIL 313

Query: 861  QDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNAE 1040
            +D  +E +D ++   KRTL++D+NRHAAVVLEG+ L D + G+TRTVAEAL R++Q  AE
Sbjct: 314  RDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTL-DVELGDTRTVAEALARSKQ--AE 370

Query: 1041 VAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHAQSD 1220
            VA  T D   +++  +   +M++IEDLQA ++ PYA LCI+D R+YF SQ+A+   A  D
Sbjct: 371  VATETSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQRANAFKATGD 430

Query: 1221 RRYLGKAE--HFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKYH 1394
                   +  H +  + Y SL   +L ++  G KDPI+  + A+K  N+++Q +SST   
Sbjct: 431  TGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQQLSSTDPQ 490

Query: 1395 NGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQK 1574
             GK  Q  V   LP + +++L + W +IQE+L  FW+   + +TF+  K+ R+KDAMAQ 
Sbjct: 491  LGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNRVKDAMAQI 550

Query: 1575 YDNLQSAKASTKVEYRHEISLLIHPMLQALD 1667
            Y  L   K S + E+RH++SLL+ PMLQ LD
Sbjct: 551  YRKLPEVKESVQSEFRHQVSLLVKPMLQVLD 581


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
            protein product [Vitis vinifera]
          Length = 602

 Score =  447 bits (1149), Expect = e-123
 Identities = 261/573 (45%), Positives = 348/573 (60%), Gaps = 20/573 (3%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSKHGS-KQALLNL 188
            K SV D GV G L ++E  FVF P+DPT S   +  V+FR I+G KFSK GS K ALLNL
Sbjct: 12   KTSVKDSGVAGVLKMTEDKFVFMPNDPTSSA--RFDVEFRFIKGHKFSKGGSNKPALLNL 69

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC--------------QLTKAEA 326
             +D S K  G+IFEF+++  R+VCR+ VG  L                     QL+  E 
Sbjct: 70   TQD-SEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQLSTIEM 128

Query: 327  ELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVS--TRQRKGLKSVMLTD 500
            E   KLL++DS+L+KL+ + V   +LTE EFW TRK LLD   S  ++QR G KS M++D
Sbjct: 129  ERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISD 188

Query: 501  FSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYR 680
              P+ DG++N+VTF+L PE IHQIFAEKPAV +A+L  VP KM E +FWNKYCR+EYL+ 
Sbjct: 189  LKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHC 248

Query: 681  TDNXXXXXXXXXXXXXXXQFLD-DESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGT 857
            T N                FL  D+ L NEAR KIR+VDP +DM  +  DDY HL  HG 
Sbjct: 249  TRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGI 308

Query: 858  AQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNA 1037
             +D  +E ID    Q +RTL +D+NRHAAVVLEG+ + D +  +TRTVAEAL ++++   
Sbjct: 309  FRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPI-DVELEDTRTVAEALAKSKR--V 365

Query: 1038 EVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHAQS 1217
            E A    D        +    M++IEDLQA +  P+A+LCI+D R YF SQQA+ +    
Sbjct: 366  EAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLG 425

Query: 1218 DRRYLGKAEH--FNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKY 1391
            D     K      +  E YGSL   +  I+  GL DPI+  + A+K  N L+Q ISSTK+
Sbjct: 426  DTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKF 485

Query: 1392 HNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQ 1571
            H GK  Q+ V   LP   +++L   W +IQE+L  FW+   + +T++  K  RLKDAM+Q
Sbjct: 486  HLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQ 545

Query: 1572 KYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
             Y  LQ  K S + ++RH++SLL+ PMLQALDA
Sbjct: 546  IYPKLQEIKESVQSDFRHQVSLLVQPMLQALDA 578


>ref|XP_004972829.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like isoform X1 [Setaria italica]
          Length = 600

 Score =  431 bits (1107), Expect = e-118
 Identities = 251/577 (43%), Positives = 361/577 (62%), Gaps = 24/577 (4%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQALLNL 188
            K ++ DPG PG L +++  F FTP+DP  +  MKL+V+FR+I+G KF+K  G+K ALLNL
Sbjct: 11   KTTLKDPGTPGILRMNDDKFTFTPNDPRSA--MKLNVEFRSIKGHKFNKVDGNKPALLNL 68

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC-----------------QLTK 317
             +D S K  G++FEFD+  +RD+CRD V  +L  +Q +                  QL+ 
Sbjct: 69   SKD-SDKGGGYMFEFDNVGNRDLCRDFVARVLGKHQGMPPRPTMPPEISVPSAGMEQLSA 127

Query: 318  AEAELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVS--TRQRKGLKSVM 491
            AE E   KLL++DS+L+KL+ + V  NIL E EFW TRK+LLD+  +  ++Q+ G K+ M
Sbjct: 128  AEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDVANKASKQKPGFKTAM 187

Query: 492  LTDFSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEY 671
             +D  P  DG++NKVTF+L PE IHQIFAEKPAVRRA+L  VP KM ++EFW KYCR+EY
Sbjct: 188  -SDVRPSADGRTNKVTFNLTPEMIHQIFAEKPAVRRAFLDFVPKKMTDLEFWRKYCRAEY 246

Query: 672  LYRTDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLSG 848
            L RT N                FL +D+ LV EA+ KI++VDP +DM  +  DDY HL  
Sbjct: 247  LLRTKNTAAAAAEAAEDEELAVFLKNDDILVKEAKLKIKQVDPTLDMEADAGDDYIHLPD 306

Query: 849  HGTAQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQ 1028
            HG  +D  +E +D D+  ++RTL +++NRHAAVVLEG A SD +  + ++VAEAL R+++
Sbjct: 307  HGILRDGSKETVDNDSEFARRTLSQELNRHAAVVLEGIA-SDVELTDAKSVAEALARSKK 365

Query: 1029 DNAEVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMH 1208
            +    +A  VD+ S ER       M++IEDLQA ++ PYA LCI+D R+YF SQQA+ + 
Sbjct: 366  EPPSTSA--VDDTSHERLLK-VARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQQANALR 422

Query: 1209 ---AQSDRRYLGKAEHFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFIS 1379
               A +D R        + +E +  L   +  I+ +     ++ ++ AVK  N L++ IS
Sbjct: 423  SLGASNDGRKSRNCS-LSIEEAFHHLTDQISSIKVNKSNCTVIQSDMAVKVLNELNEGIS 481

Query: 1380 STKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKD 1559
             ++  N K  Q+ +   +P+  RD+L + W  IQE+L  FW+   + ST + NK++R+KD
Sbjct: 482  RSRRLNLKNPQEGLLGRVPQHTRDELMDHWTAIQELLRHFWSSYPITSTVLYNKVQRVKD 541

Query: 1560 AMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
            AM Q Y  LQ+ K S + + RHEIS L+ PM QALDA
Sbjct: 542  AMTQIYQKLQAIKESAQPDVRHEISRLVKPMTQALDA 578


>ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Brachypodium distachyon]
          Length = 602

 Score =  423 bits (1087), Expect = e-115
 Identities = 246/577 (42%), Positives = 346/577 (59%), Gaps = 24/577 (4%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQA--LL 182
            K ++ DPG  G L ++E    F P+DP   + MKL+V FR I+G KF+K  GSK    LL
Sbjct: 11   KTTLKDPGTTGVLRMNEDKLAFIPNDPR--SLMKLNVDFRTIKGHKFNKVDGSKPTPPLL 68

Query: 183  NLIRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC------------------Q 308
            NL +D S K  G++FEFD+  +RD+CRD V  +L  +Q +                   Q
Sbjct: 69   NLSKD-SDKGGGYMFEFDNVGNRDLCRDFVARVLGKHQGIVPPRPNAPPEKSVAAAGPEQ 127

Query: 309  LTKAEAELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVST--RQRKGLK 482
            L+ AE E   KLL++DS+L+KL+ + V  NIL E EFW TRK+LLD+  +T  +Q+ G +
Sbjct: 128  LSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEANTASKQKPGFR 187

Query: 483  SVMLTDFSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCR 662
            SVML D  P  DGQ+NKVTF L  E IHQIFAEKPAV RA+L  VP K+ E +FW KYCR
Sbjct: 188  SVMLADVRPSADGQTNKVTFSLTNEIIHQIFAEKPAVHRAFLDYVPKKLSEKDFWTKYCR 247

Query: 663  SEYLYRTDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSH 839
            +EYL RT N                FL +D+ +  EA+ KI++VDP +DM  +  DDY H
Sbjct: 248  AEYLLRTKNTLAAKAEAADDEELAIFLRNDDIVAKEAKLKIKRVDPTLDMEADAGDDYIH 307

Query: 840  LSGHGTAQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALER 1019
            L  HG  +D  RE  D D+  ++RTL +D+NRHAAVVLEG+  +D +  + +TVAEAL R
Sbjct: 308  LPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRK-TDVEIADAKTVAEALAR 366

Query: 1020 TEQDNAEVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQAS 1199
            ++ +     ++  D+ S ER       M++IEDLQA ++ PYA LCI+D R+YF SQQA+
Sbjct: 367  SKTETP--CSSIADDASHERLLK-VARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQQAN 423

Query: 1200 PMHAQSDRRYLGKAEHFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFIS 1379
            P+          ++   + D+ +  L   +  ++ + L  P++ +  A+K  N L++ IS
Sbjct: 424  PLRPLGGDGRKARSCSLSTDDAFRHLMDQISSVKVNKLSCPVVQSNVALKVLNELNEGIS 483

Query: 1380 STKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKD 1559
             ++  N K  Q  +   LP + RD+L + W  IQE+L  FW+   + +T + NKI+R+KD
Sbjct: 484  RSRRLNLKNPQDSLLGRLPHRTRDELMDHWTAIQELLRHFWSSYPITTTVLYNKIQRVKD 543

Query: 1560 AMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
            AM Q Y  LQ  K S + + RHEIS L+ PM QALDA
Sbjct: 544  AMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDA 580


>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
            gi|38636938|dbj|BAD03200.1| unknown protein [Oryza sativa
            Japonica Group] gi|113623552|dbj|BAF23497.1| Os08g0338200
            [Oryza sativa Japonica Group]
            gi|215686948|dbj|BAG90767.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 604

 Score =  421 bits (1083), Expect = e-115
 Identities = 248/580 (42%), Positives = 354/580 (61%), Gaps = 27/580 (4%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQA--LL 182
            K ++ DPG  G L ++E  F FTP DP  +  MKL+V FR+I+G KF+K  GSK A  LL
Sbjct: 11   KTTLKDPGTTGVLRMNEDKFTFTPHDPRSA--MKLNVDFRSIKGHKFNKVDGSKPAPPLL 68

Query: 183  NLIRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC------------------Q 308
            NL +D S K  G++FEFD+  +RD+ RD V ++L   Q                     Q
Sbjct: 69   NLSKD-SDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSVTSTGEEQ 127

Query: 309  LTKAEAELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVS--TRQRKGLK 482
            L+ AE +   KLLQ+DS+L+KL+ + V  NIL E EFW TRK+LL++  +  ++QR G K
Sbjct: 128  LSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANKGSKQRPGFK 187

Query: 483  SVMLTDFSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCR 662
            S ML D  P  DG++NKVTF L  E IHQIFAEKPAV RA+L  VP KM E +FW KY R
Sbjct: 188  SAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFR 247

Query: 663  SEYLYRTDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSH 839
            +EYL RT N                FL +D+ L  EAR KI++VDP +DM  +  DDY H
Sbjct: 248  AEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIH 307

Query: 840  LSGHGTAQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALER 1019
            L  HG  +D  +E ID D   ++RTL +D+NRHAAVVLEG++ SD +  +T+TVAEA+ R
Sbjct: 308  LPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRS-SDVELTDTKTVAEAIAR 366

Query: 1020 TEQDNAEVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQAS 1199
            ++++    +++  D+ + ER       M++IEDLQA ++ PYA LCI+D R+YF SQQA+
Sbjct: 367  SKKEPP--SSSISDDTNHERLVK-VARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQQAN 423

Query: 1200 PMHA---QSDRRYLGKAEHFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQ 1370
             + +    +D R+       + D+ +  L   +  I+ +GL  P++ ++ A+K  N L++
Sbjct: 424  ALRSLGGNNDGRHARNCR-LSTDDAFDHLLGQISSIKVNGLNYPVIQSDVALKVLNELNE 482

Query: 1371 FISSTKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRR 1550
             IS ++  N K  Q  +   +P++ RD+L + W  IQE+L  FW+   + ++ + NK++R
Sbjct: 483  GISRSRRLNLKNPQDSLLGQIPRRTRDELMDHWAAIQELLQHFWSSYPITTSVLYNKVQR 542

Query: 1551 LKDAMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
            +KDAM Q Y  LQ  K S + + RHEIS L+ PM QALDA
Sbjct: 543  IKDAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDA 582


>ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [Sorghum bicolor]
            gi|241940216|gb|EES13361.1| hypothetical protein
            SORBIDRAFT_07g003540 [Sorghum bicolor]
          Length = 600

 Score =  420 bits (1080), Expect = e-115
 Identities = 245/577 (42%), Positives = 348/577 (60%), Gaps = 24/577 (4%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQALLNL 188
            K ++ DPG PG L +++  F FTP+DP  +  MK +V FR I+G KF+K  G+K ALLNL
Sbjct: 11   KTTIKDPGTPGILRMNDDRFTFTPNDPRSA--MKFNVDFRTIKGHKFNKVEGNKAALLNL 68

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC------------------QLT 314
             ++  A   G+IFEFD+  +RD+CRD V  +L  +Q                     QL+
Sbjct: 69   SKEDKA--GGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPPRPTVAPENSVASAALEQLS 126

Query: 315  KAEAELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVSTR--QRKGLKSV 488
             AE E   KLL++DS+L+KL+ + V  NIL E EFW TRK+LLD+  + R  QR G K+ 
Sbjct: 127  VAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEANKRSKQRAGFKN- 185

Query: 489  MLTDFSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSE 668
             L D  P  DG++NKVTF + PE IHQIFAEKPAVRRAYL  VP KM E  FW KYCR+E
Sbjct: 186  SLVDIKPTTDGRTNKVTFQITPEMIHQIFAEKPAVRRAYLDYVPKKMVETRFWEKYCRAE 245

Query: 669  YLYRTDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLS 845
            YL+RT N                FL +D+ L  E   +I++VDP +DM  +  DDY HL 
Sbjct: 246  YLFRTKNTAAATAEAAGDEELAIFLKNDDILAKEFWLQIKRVDPTLDMEADTGDDYIHLP 305

Query: 846  GHGTAQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTE 1025
             HG  +D  +E ID D+  ++RTL +D+NRHAAVVLEG++L D +  + +T+AEAL R++
Sbjct: 306  DHGIHRDGNKETIDADSELARRTLSQDLNRHAAVVLEGRSL-DVESTDPKTLAEALARSK 364

Query: 1026 QDNAEVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPM 1205
            +   E  + ++D+ ++         M++IEDLQA ++ PYA LCI+D R+YF SQQA+ +
Sbjct: 365  K---EPPSTSIDDDANHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQQANAL 421

Query: 1206 HAQSDRRYLGKAE--HFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFIS 1379
             +        KA     + +E +  L   +  I+ + L  PI+ ++ A+K  N L++ IS
Sbjct: 422  RSLGGSNDGRKARTCSLSTEEAFHHLMDQMSSIKVNKLNCPIIQSDMALKVLNELNEGIS 481

Query: 1380 STKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKD 1559
             ++  N K  Q+ +   LP+  RD+L + W  IQE+L  FW+   + S  + NK++R+K+
Sbjct: 482  RSRRLNLKNPQEGLLGQLPQHTRDELMDHWTAIQELLRHFWSSYPITSAVLYNKVQRVKE 541

Query: 1560 AMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
            AM Q Y  LQ  K S + + RHEIS L+ PM QALDA
Sbjct: 542  AMTQIYQKLQLIKESAQPDVRHEISRLVKPMTQALDA 578


>gb|ACG24327.1| BSD domain containing protein [Zea mays]
          Length = 600

 Score =  419 bits (1078), Expect = e-114
 Identities = 245/577 (42%), Positives = 348/577 (60%), Gaps = 24/577 (4%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQALLNL 188
            K ++ DPG PG L ++   F FTP+DP  +  MK +V FR I+G KF+K  G+K ALLNL
Sbjct: 11   KTTIKDPGTPGILRMNGDRFTFTPNDPRSA--MKFNVDFRTIKGHKFNKVEGNKAALLNL 68

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC------------------QLT 314
             ++  A   G+IFEFD+  +RD CRD V  +L  +Q +                   QL+
Sbjct: 69   SKEDKA--GGYIFEFDNVGNRDQCRDFVARVLGKHQGIVPPRPTVAPENSVASAALEQLS 126

Query: 315  KAEAELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVSTR--QRKGLKSV 488
             AE E   KLL++DS+L+KL+ + V  NIL E EFW TRK+LLD+  + R  Q+ G KS 
Sbjct: 127  AAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEANKRSKQKPGFKSA 186

Query: 489  MLTDFSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSE 668
             L D  P  DG++NKVTF + PE IHQIFAEKPAVRRAYL  VP KM E  FW KYCR+E
Sbjct: 187  -LVDIRPTTDGRTNKVTFQITPEMIHQIFAEKPAVRRAYLDFVPKKMSETRFWEKYCRAE 245

Query: 669  YLYRTDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLS 845
            YL RT N                FL +D+ L  EA+ KI++VDP +DM  +  DDY HL 
Sbjct: 246  YLVRTKNTAAATAEAAGNEELAIFLKNDDILAKEAKLKIKRVDPTLDMEADTGDDYIHLP 305

Query: 846  GHGTAQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTE 1025
             HG  +D  +E +D D+  ++RTL +D+NRHAAVVLEG++L D +  + +T+AEAL R++
Sbjct: 306  DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSL-DVESSDPKTLAEALARSK 364

Query: 1026 QDNAEVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPM 1205
            ++    + + VD+ + ER       M++IEDLQA ++  YA LCI+D R+YF SQQA+ +
Sbjct: 365  KEPP--STSNVDDDNHERLMK-VARMTEIEDLQAPRSLLYAPLCIKDPREYFDSQQANAL 421

Query: 1206 HAQSDRRYLGKAEH--FNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFIS 1379
             +        KA     + +E++  L   +  ++ + L  PI+ ++ A+K  N L++ IS
Sbjct: 422  RSLGGSNGGRKAHSCSLSTEEVFHHLMDQMSSVKVNRLNCPIVQSDMALKVLNELNEGIS 481

Query: 1380 STKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKD 1559
             ++  N K  Q+ +   LP+  RD+L + W  IQE+L  FW+   + S  + NK++R+K+
Sbjct: 482  RSRRLNLKNPQEGLLGQLPQHTRDELMDHWTAIQELLRHFWSSYPITSAVLYNKVQRVKE 541

Query: 1560 AMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
            AM Q Y  LQ  K   + + RHEIS L+ PM QALDA
Sbjct: 542  AMTQIYQKLQLIKELAQPDVRHEISRLVKPMTQALDA 578


>gb|AFW61224.1| BSD domain containing protein [Zea mays]
          Length = 600

 Score =  419 bits (1076), Expect = e-114
 Identities = 245/577 (42%), Positives = 348/577 (60%), Gaps = 24/577 (4%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQALLNL 188
            K ++ DPG PG L ++   F FTP+DP  +  MK +V FR I+G KF+K  G+K ALLNL
Sbjct: 11   KTTIKDPGTPGILRMNGDRFTFTPNDPRSA--MKFNVDFRTIKGHKFNKVEGNKAALLNL 68

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC------------------QLT 314
             ++  A   G+IFEFD+  +RD CRD V  +L  +Q +                   QL+
Sbjct: 69   SKEDKA--GGYIFEFDNVGNRDQCRDFVARVLGKHQGIVPPRPTVAPENSVASAALEQLS 126

Query: 315  KAEAELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVSTR--QRKGLKSV 488
             AE E   KLL++DS+L+KL+ + V  NIL E EFW TRK+LLD+  + R  Q+ G KS 
Sbjct: 127  AAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEANKRSKQKPGFKSA 186

Query: 489  MLTDFSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSE 668
             L D  P  DG++NKVTF + PE IHQIFAEKPAVRRAYL  VP KM E  FW KYCR+E
Sbjct: 187  -LVDIRPTTDGRTNKVTFQITPEMIHQIFAEKPAVRRAYLDFVPKKMSETRFWEKYCRAE 245

Query: 669  YLYRTDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLS 845
            YL RT N                FL +D+ L  EA+ KI++VDP +DM  +  DDY HL 
Sbjct: 246  YLVRTKNTAAATAEAAGDEELAIFLKNDDILAKEAKLKIKRVDPTLDMEADTGDDYIHLP 305

Query: 846  GHGTAQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTE 1025
             HG  +D  +E +D D+  ++RTL +D+NRHAAVVLEG++L D +  + +T+AEAL R++
Sbjct: 306  DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSL-DVESTDPKTLAEALARSK 364

Query: 1026 QDNAEVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPM 1205
            ++    + + VD+ + ER       M++IEDLQA ++  YA LCI+D R+YF SQQA+ +
Sbjct: 365  KEPP--STSNVDDDNHERLMK-VARMTEIEDLQAPRSLLYAPLCIKDPREYFDSQQANAL 421

Query: 1206 HAQSDRRYLGKAEH--FNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFIS 1379
             +        KA     + +E++  L   +  ++ + L  PI+ ++ A+K  N L++ IS
Sbjct: 422  RSLGGSNGGRKAHSCSLSTEEVFHHLMDQMSSVKVNRLNCPIVQSDMALKVLNELNEGIS 481

Query: 1380 STKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKD 1559
             ++  N K  Q+ +   LP+  RD+L + W  IQE+L  FW+   + S  + NK++R+K+
Sbjct: 482  RSRRLNLKNPQEGLLGQLPQHTRDELMDHWTAIQELLRHFWSSYPITSAVLYNKVQRVKE 541

Query: 1560 AMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
            AM Q Y  LQ  K   + + RHEIS L+ PM QALDA
Sbjct: 542  AMTQIYQKLQLIKELAQPDVRHEISRLVKPMTQALDA 578


>dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score =  418 bits (1074), Expect = e-114
 Identities = 251/580 (43%), Positives = 350/580 (60%), Gaps = 27/580 (4%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQ--ALL 182
            K ++ D G  G L +SE  F FTP+DP   + MKL V F+ I+G KF+K  GSK   ALL
Sbjct: 7    KATLKDRGTGGVLRMSEDKFTFTPNDPR--SLMKLSVDFQTIKGHKFNKVDGSKPTPALL 64

Query: 183  NLIRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC------------------Q 308
            NL +D S K  G+IFEFD+  +RD+CRD V  +L   Q                     Q
Sbjct: 65   NLSKD-SDKGGGYIFEFDNVGNRDLCRDFVARVLGKYQGTVPARPNVPPELSAVSTGPEQ 123

Query: 309  LTKAEAELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVS--TRQRKGLK 482
            L+ AE E   KLL++DS+L+KL+ + V  NIL E EFW TRK+LLD+  S  ++Q+ G K
Sbjct: 124  LSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETSKGSKQKPGFK 183

Query: 483  SVMLTDFSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCR 662
            S ML D  P  DGQ+NKVTF L  E IHQIFAEKPAV RA+L  VP K+ E +FW KYCR
Sbjct: 184  SAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKDFWTKYCR 243

Query: 663  SEYLYRTDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSH 839
            +EYL RT N                FL +D+ L  EA+ KI++VDP +DM  +  DDY H
Sbjct: 244  AEYLLRTKNTLAAKAEAAEDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEADAGDDYIH 303

Query: 840  LSGHGTAQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALER 1019
            L  HG  +D  RE  D D+  ++RTL +D+NRHAAVVLEG++ +D +  +T+TVAEAL R
Sbjct: 304  LPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRS-ADIESTDTKTVAEALAR 362

Query: 1020 TEQDNAEVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQAS 1199
            ++++    + A  D+ S ER       M++IEDLQA ++ PYA LCI+D R+YF SQQA+
Sbjct: 363  SKKEPPPSSVA--DDASHERLVKA-ARMTEIEDLQAPRSLPYALLCIKDPREYFDSQQAN 419

Query: 1200 ---PMHAQSDRRYLGKAEHFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQ 1370
               P+ +   R+   ++   + D+ +  L   +  ++   +  P++ ++ A+K  N L++
Sbjct: 420  ALRPLGSNDGRK--ARSCSLSTDDAFRHLMDQISSVK---MNCPVVQSDVALKVLNELNE 474

Query: 1371 FISSTKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRR 1550
             IS ++  N K  Q  +   LP + RD+L + W  IQE+L  FW+   + +T + NK++R
Sbjct: 475  GISRSRRLNLKNPQDSLLGRLPHRTRDELMDHWMAIQELLRHFWSSYPITTTVLCNKVQR 534

Query: 1551 LKDAMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
            LK+AM Q Y  LQ  K S + + RHEIS L+ PM QALDA
Sbjct: 535  LKEAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDA 574


>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
            gi|557555943|gb|ESR65957.1| hypothetical protein
            CICLE_v10007802mg [Citrus clementina]
          Length = 597

 Score =  417 bits (1073), Expect = e-114
 Identities = 243/571 (42%), Positives = 342/571 (59%), Gaps = 18/571 (3%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSKHGS-KQALLNL 188
            K SV DPG  G L +++   +F P +   ++  KL V+F++IQG K++K GS K  L+NL
Sbjct: 14   KISVKDPGTTGALRMNDQKLMFMPDNR--NSGAKLVVEFKSIQGHKYTKEGSNKPPLINL 71

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC--------------QLTKAEA 326
                +A+   +IFEFDS+    VCRD V ++L  ++                 QL++ E 
Sbjct: 72   A---NAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALEKSAVKLPDEQLSEEEM 128

Query: 327  ELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVS--TRQRKGLKSVMLTD 500
            +L  KLLQ++S+L+KL+ + V  NILTE EFW  RK LLD   S  ++QR G KS M++D
Sbjct: 129  QLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPSKKSKQRVGFKSAMISD 188

Query: 501  FSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYR 680
              P  DG++NKVTF L PE I QIFAEKPAV RA+L  VP KM E+EFW KYCR+EYL R
Sbjct: 189  IRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSR 248

Query: 681  TDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGT 857
            T N                FL +D+ L NE R KIR+VDP +DM  +  DDY+HL  HG 
Sbjct: 249  TKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGI 308

Query: 858  AQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNA 1037
             +D  +E  +  +   +RTL++D+NRHAAVVLEG+ +      +TR +AEAL R+++ N 
Sbjct: 309  FRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKRGNE 368

Query: 1038 EVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHAQS 1217
                   DN ++E   D    +++IEDLQA    P A L I+D R+YF SQQA+ + A  
Sbjct: 369  GA-----DNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKASR 423

Query: 1218 DRRYLGKAEHFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKYHN 1397
            D +   K    +  E YGS+  A+  I++ GL DPI+N E A+K  + L+  ISS KYH 
Sbjct: 424  DSQASMKCS-LSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHL 482

Query: 1398 GKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQKY 1577
            GK  ++ V   LP   ++KL   W +IQE+L  FW+   + + ++ +K+ RLKDA++  Y
Sbjct: 483  GKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIY 542

Query: 1578 DNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
              L+  K S   + RH++SLL+ PM QALDA
Sbjct: 543  PQLEEMKESLPADLRHQVSLLVRPMQQALDA 573


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  417 bits (1073), Expect = e-114
 Identities = 256/612 (41%), Positives = 345/612 (56%), Gaps = 63/612 (10%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSKHGS-KQALLNL 188
            K SV D GV G L ++E  FVF P+DPT S   +  V+FR I+G KFSK GS K ALLNL
Sbjct: 12   KTSVKDSGVAGVLKMTEDKFVFMPNDPTSSA--RFDVEFRFIKGHKFSKGGSNKPALLNL 69

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC--------------QLTKAEA 326
             +D S K  G+IFEF+++  R+VCR+ VG+ L                     QL+  E 
Sbjct: 70   TQD-SEKGGGYIFEFENYPDREVCREFVGKALAKFSEASKAGSEQSAVKLFDEQLSTIEM 128

Query: 327  ELTKKLLQKD-------------------------------------------SDLRKLY 377
            E   KLL++D                                           S+L+KL+
Sbjct: 129  ERRIKLLREDRHSVPEEKFGVLLLKGILPLFGETIIAMKLIDSGIASKVKWDCSELQKLH 188

Query: 378  TELVTENILTEPEFWTTRKHLLDEAVS--TRQRKGLKSVMLTDFSPVQDGQSNKVTFHLA 551
             + V   +LTE EFW TRK LLD   S  ++QR G KS M++D  P+ DG++N+VTF+L 
Sbjct: 189  KQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLT 248

Query: 552  PESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYRTDNXXXXXXXXXXXXXX 731
            PE IHQIFAEKPAV +A+L  VP KM E +FWNKYCR+EYL+ T N              
Sbjct: 249  PEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEEL 308

Query: 732  XQFLD-DESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGTAQDSGRERIDEDANQSK 908
              FL  D+ L +EAR KIR+VDP +DM  +  DDY HL  HG  +D  +E ID    Q +
Sbjct: 309  AVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIIDPQYEQYR 368

Query: 909  RTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNAEVAAATVDNLSDERCKD 1088
            RTL +D+NRHAAVVLEG+ + D +  +TRTVAEAL ++++   E A    D        +
Sbjct: 369  RTLSQDLNRHAAVVLEGRPI-DVELEDTRTVAEALAKSKR--VEAANEKSDGSVTRERLE 425

Query: 1089 GFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHAQSDRRYLGKAEH--FNPDE 1262
                M++IEDLQA +  P+A+LCI+D R YF SQQA+ +    D     K      +  E
Sbjct: 426  RISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSSQE 485

Query: 1263 IYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKYHNGKKAQKDVCSNLPKQ 1442
             YGSL   +  I+  GL DPI+  + A+K  N L+Q ISSTK+H GK  Q+ V   LP  
Sbjct: 486  AYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPII 545

Query: 1443 ERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQKYDNLQSAKASTKVEYR 1622
             +++L   W +IQE+L  FW+   + +T++  K  RLKDAM+Q Y  LQ  K S + ++R
Sbjct: 546  TKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSDFR 605

Query: 1623 HEISLLIHPMLQ 1658
            H++SLL+ PMLQ
Sbjct: 606  HQVSLLVQPMLQ 617


>dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  417 bits (1072), Expect = e-114
 Identities = 250/579 (43%), Positives = 350/579 (60%), Gaps = 26/579 (4%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQA--LL 182
            K ++ DPG  G L +SE   +FTP+DP   + MKL V FR+I+G KF+K  GSK    LL
Sbjct: 11   KTTLKDPGHGGVLRMSEDKLIFTPNDPR--SLMKLSVDFRSIKGHKFNKVDGSKPTPPLL 68

Query: 183  NLIRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC------------------Q 308
            NL +  S K  G+IFEFD+  +RD+CRD V  +L  +Q                     Q
Sbjct: 69   NLSK-VSDKGGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPARPNVPPEKLAVSTGPEQ 127

Query: 309  LTKAEAELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAV--STRQRKGLK 482
            L+ AE E   KLL++DS+L+KL+ + V  NIL E EFW TRK+LLD+    S++Q+ G K
Sbjct: 128  LSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETNKSSKQKPGFK 187

Query: 483  SVMLTDFSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCR 662
            S ML D  P  DGQ+NKVTF L  E IHQIFAEKPAV RA+L  VP K+ E +FW KYCR
Sbjct: 188  SAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKDFWTKYCR 247

Query: 663  SEYLYRTDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSH 839
            +EYL RT N                FL +D+ L  EA+ KI++VDP +DM  +  DDY H
Sbjct: 248  AEYLLRTKNTLAAKAEAADDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEADAGDDYIH 307

Query: 840  LSGHGTAQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALER 1019
            L  HG  +D  RE  D D+  ++RTL +D+NRHAAVVLEG++ +D +  +T+TVAEAL R
Sbjct: 308  LPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRS-TDIESTDTKTVAEALAR 366

Query: 1020 TEQDNAEVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQAS 1199
            ++++    + A  D+ S ER       M+++EDLQA ++ PYA LCI+D R+YF SQQA+
Sbjct: 367  SKKEPPPSSVA--DDASHERLVKA-ARMTELEDLQAPRSLPYAPLCIKDPREYFDSQQAN 423

Query: 1200 PMH--AQSDRRYLGKAEHFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQF 1373
             +     +D R   ++   + D+ +  L   +  ++   +  P++ A+ A+K  N L++ 
Sbjct: 424  ALRPLGNNDGR-KARSCSLSADDAFRHLMDQISSVK---MNCPVVQADVALKVLNELNEG 479

Query: 1374 ISSTKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRL 1553
            IS ++  N K  Q  +   LP + RD+L + W  IQE+L  FW+   + +  +SNK++RL
Sbjct: 480  ISRSRRLNLKNPQDSLLGRLPHRTRDELMDHWTAIQELLRHFWSSYPITTAVLSNKVQRL 539

Query: 1554 KDAMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
            K+AM Q Y  LQ  K S + + RHEIS L+ PM QALDA
Sbjct: 540  KEAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDA 578


>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Citrus sinensis]
          Length = 597

 Score =  417 bits (1071), Expect = e-114
 Identities = 242/571 (42%), Positives = 342/571 (59%), Gaps = 18/571 (3%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSKHGS-KQALLNL 188
            K SV DPG PG L +++   +F P +   ++  KL V+F++IQG K++K GS K  L+NL
Sbjct: 14   KISVKDPGTPGALRMNDQKLMFMPDNR--NSGAKLVVEFKSIQGHKYTKEGSNKPPLINL 71

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC--------------QLTKAEA 326
                +A+   +IFEFDS+    VCRD V ++L  ++                 QL++ E 
Sbjct: 72   A---NAQGGSYIFEFDSYADLHVCRDFVSKVLEKSKETPNAALEKSAIKLPDEQLSEEEM 128

Query: 327  ELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLD--EAVSTRQRKGLKSVMLTD 500
            +L  KLLQ++S+L+KL+ + V  NILTE EFW  RK LLD   +  ++QR G KS M++D
Sbjct: 129  QLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDIDPSKKSKQRVGFKSAMISD 188

Query: 501  FSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYR 680
              P  DG++NKVTF L PE I QIFAEKPAV RA+L  VP KM E+EFW KYCR+EYL R
Sbjct: 189  IRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSR 248

Query: 681  TDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGT 857
            T N                FL +D+ L NE R KIR+VDP +DM  +  DDY+HL  HG 
Sbjct: 249  TKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGI 308

Query: 858  AQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNA 1037
             +D  +E  +  +   +RTL++D+NRHAAVVLEG+ +      +TR +AEAL R+++ N 
Sbjct: 309  FRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKRGNE 368

Query: 1038 EVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHAQS 1217
                   DN ++E   D    +++IEDLQA    P A L I+D R+YF SQQA+ + A  
Sbjct: 369  GA-----DNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKASR 423

Query: 1218 DRRYLGKAEHFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKYHN 1397
            D +   K    +  E Y S+  A+  I++ GL DPI+N E A+K  + L+  ISS KYH 
Sbjct: 424  DAQASMKCS-LSKQEAYRSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHL 482

Query: 1398 GKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQKY 1577
            GK  ++ V   LP   ++KL   W +IQE+L  FW+   + + ++ +K+ RLKDA++  Y
Sbjct: 483  GKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIY 542

Query: 1578 DNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
              L+  K S   + RH++SLL+ PM QALDA
Sbjct: 543  PQLEEMKESLPADLRHQVSLLVRPMQQALDA 573


>ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-3-like isoform X1 [Glycine max]
            gi|571483735|ref|XP_006589333.1| PREDICTED: probable RNA
            polymerase II transcription factor B subunit 1-3-like
            isoform X2 [Glycine max]
          Length = 587

 Score =  413 bits (1061), Expect = e-112
 Identities = 246/568 (43%), Positives = 340/568 (59%), Gaps = 15/568 (2%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSKHGSKQA-LLNL 188
            K +V DPG PG L L++  FVF P+DPT  T  KL V+FR IQG K +K GSKQ  LLNL
Sbjct: 13   KTTVKDPGTPGVLKLTQDRFVFKPNDPTSKT--KLDVEFRFIQGHKVTKEGSKQPPLLNL 70

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQ--------NVCQLTKAEAELTKKL 344
            IR     +   IFE +SF    VCR+LVG  L  N         +  QL+ AE  L  KL
Sbjct: 71   IR----AQGSCIFELESFADLHVCRELVGFALNRNVPGEATKVISEEQLSPAEMALRIKL 126

Query: 345  LQKDSDLRKLYTELVTENILTEPEFWTTRKHLLD--EAVSTRQRKGLKSVMLTDFSPVQD 518
            LQ+DS L++L+ ELV    LTE EFW T+K LLD  E+   +QR G K+ ++ D  P+ D
Sbjct: 127  LQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDTKPMSD 186

Query: 519  GQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYRTDNXXX 698
            G+ N+V F L PE  +QIFA KPAV +A+L  VP KM E++FWNKY ++EYL+ T N   
Sbjct: 187  GRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMNEVDFWNKYFKAEYLHSTKNAVA 246

Query: 699  XXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGTAQDSGR 875
                         FL DDE L  EAR K+R+VDP +DM  +  DDY+HL  HG  +D  +
Sbjct: 247  AAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFRDGSK 306

Query: 876  ERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNAEVAAAT 1055
            +  +   +  KRTL++D+NR  AVVLEG+ L D +  + RTVAE L R +Q+        
Sbjct: 307  DISEAQNSLYKRTLLQDLNRQGAVVLEGKTL-DMEMEHPRTVAEILARRKQE-------- 357

Query: 1056 VDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHAQSDRRYLG 1235
             D + DE  ++   +M+ IEDLQA    PYA LCI+D R YF SQQA+ +    D +  G
Sbjct: 358  CDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAVKTLDDSQ-AG 416

Query: 1236 KAE---HFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKYHNGKK 1406
              +       +E Y SL  ++  I+ +GL+DP+ + + A+K  N L++ I+STKYH GK 
Sbjct: 417  MEQMKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNITSTKYHLGKS 476

Query: 1407 AQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQKYDNL 1586
            +Q+ V   LP   ++KL + W   QE+L  FW+   V++  + +K RRLKD+++Q Y  L
Sbjct: 477  SQESVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSKTRRLKDSISQIYSKL 536

Query: 1587 QSAKASTKVEYRHEISLLIHPMLQALDA 1670
            +  K S + + RH +SL++HPM QAL+A
Sbjct: 537  EDIKVSAESDLRHHVSLVVHPMQQALNA 564


>ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Oryza brachyantha]
          Length = 621

 Score =  412 bits (1058), Expect = e-112
 Identities = 244/561 (43%), Positives = 342/561 (60%), Gaps = 22/561 (3%)
 Frame = +3

Query: 54   LSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQA--LLNLIRDPSAKRAGFI 224
            ++E  F FTP+DP  +  MKL+V FR+I+G KF+K  G+K A  LLNL +D S K  G+I
Sbjct: 47   MNEDKFTFTPNDPRSA--MKLNVDFRSIKGHKFNKVDGNKPAPPLLNLSKD-SDKGGGYI 103

Query: 225  FEFDSFESRDVCRDLVGEILRNNQNVC-------------QLTKAEAELTKKLLQKDSDL 365
            FEF++  SRD+ RD V  +L   Q                QL+ AE +   KLL +DS+L
Sbjct: 104  FEFENVTSRDLSRDFVARVLGKQQGTIPPPENSVTSTDPEQLSAAEMQRRMKLLHEDSEL 163

Query: 366  RKLYTELVTENILTEPEFWTTRKHLLDEAVS--TRQRKGLKSVMLTDFSPVQDGQSNKVT 539
            +KL+ +LV  NIL E EFW TRK+LLD+  +  ++QR G KS ML D  P  DG++NKVT
Sbjct: 164  QKLHRKLVIGNILQESEFWATRKNLLDDEANKGSKQRPGFKSAMLADVRPSADGRTNKVT 223

Query: 540  FHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYRTDNXXXXXXXXXX 719
            F L  E IHQIFAEKPAV RA+L  VP KM E +FW KY R+EYL RT N          
Sbjct: 224  FSLTTEIIHQIFAEKPAVHRAFLNFVPKKMSEKDFWTKYFRAEYLLRTKNTVAAAAEAAE 283

Query: 720  XXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGTAQDSGRERIDEDA 896
                  FL +D+ L  EAR KI++VDP +DM  +  DDY HL  HG  +D  +E I+ D 
Sbjct: 284  DEELAVFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIHLPDHGIIRDGSKETIENDG 343

Query: 897  NQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNAEVAAATVDNLSDE 1076
              ++RTL +D+NRHAAVVLEG++ SD +  +T+TVAEAL R++++    + +  D+ S E
Sbjct: 344  ELARRTLSQDLNRHAAVVLEGRS-SDVELTDTKTVAEALARSKREPPPSSIS--DDTSHE 400

Query: 1077 RCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHA---QSDRRYLGKAEH 1247
            R       M++IEDLQA ++ PYA LCI+D R+YF SQQA+ + +    +D R+      
Sbjct: 401  RLVK-VARMTEIEDLQAPRSVPYAPLCIKDPREYFDSQQANALRSLGGNNDGRHARNCR- 458

Query: 1248 FNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKYHNGKKAQKDVCS 1427
             +  + +  L   +  I+ +GL  P++ ++ A K  N L+  IS T+  N K  Q  +  
Sbjct: 459  LSAHDAFDHLLGQISSIKVNGLNYPVVQSDVAFKVLNELNDGISRTRRLNLKNPQDSLLG 518

Query: 1428 NLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQKYDNLQSAKAST 1607
             +P+  RD+L + W  IQE+L  FW+   + ++ + NK++R+KDAM Q Y  LQ+ K S 
Sbjct: 519  QIPRHTRDELMDHWTAIQELLRHFWSSYPITTSVLYNKVQRIKDAMTQIYQKLQNIKESA 578

Query: 1608 KVEYRHEISLLIHPMLQALDA 1670
            + + RHEIS L+ PM QALDA
Sbjct: 579  QPDVRHEISQLVKPMTQALDA 599


>gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indica Group]
            gi|222640385|gb|EEE68517.1| hypothetical protein
            OsJ_26954 [Oryza sativa Japonica Group]
          Length = 625

 Score =  409 bits (1051), Expect = e-111
 Identities = 248/601 (41%), Positives = 354/601 (58%), Gaps = 48/601 (7%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSK-HGSKQA--LL 182
            K ++ DPG  G L ++E  F FTP DP  +  MKL+V FR+I+G KF+K  GSK A  LL
Sbjct: 11   KTTLKDPGTTGVLRMNEDKFTFTPHDPRSA--MKLNVDFRSIKGHKFNKVDGSKPAPPLL 68

Query: 183  NLIRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC------------------Q 308
            NL +D S K  G++FEFD+  +RD+ RD V ++L   Q                     Q
Sbjct: 69   NLSKD-SDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSVTSTGEEQ 127

Query: 309  LTKAEAELTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVS--TRQRKGLK 482
            L+ AE +   KLLQ+DS+L+KL+ + V  NIL E EFW TRK+LL++  +  ++QR G K
Sbjct: 128  LSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANKGSKQRPGFK 187

Query: 483  SVMLTDFSPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCR 662
            S ML D  P  DG++NKVTF L  E IHQIFAEKPAV RA+L  VP KM E +FW KY R
Sbjct: 188  SAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYFR 247

Query: 663  SEYLYRTDNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSH 839
            +EYL RT N                FL +D+ L  EAR KI++VDP +DM  +  DDY H
Sbjct: 248  AEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIH 307

Query: 840  LSGHGTAQDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALER 1019
            L  HG  +D  +E ID D   ++RTL +D+NRHAAVVLEG++ SD +  +T+TVAEA+ R
Sbjct: 308  LPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRS-SDVELTDTKTVAEAIAR 366

Query: 1020 TEQDNAEVAAATVDNLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQAS 1199
            ++++    +++  D+ + ER       M++IEDLQA ++ PYA LCI+D R+YF SQQA+
Sbjct: 367  SKKE--PPSSSISDDTNHERLVK-VARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQQAN 423

Query: 1200 PMHA---QSDRRYLGKAEHFNPDEIYGSLAYALLGIRESGLKDPILNAESAVK------- 1349
             + +    +D R+       + D+ +  L   +  I+ +GL  P++ ++ A+K       
Sbjct: 424  ALRSLGGNNDGRHARNC-RLSTDDAFDHLLGQISSIKVNGLNYPVIQSDVALKKLMMKAA 482

Query: 1350 --------------AQNNLSQFISSTKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQEM 1487
                            N L++ IS ++  N K  Q  +   +P++ RD+L + W  IQE+
Sbjct: 483  FEDHVDIQITCDWRVLNELNEGISRSRRLNLKNPQDSLLGQIPRRTRDELMDHWAAIQEL 542

Query: 1488 LCQFWACCLVNSTFVSNKIRRLKDAMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQALD 1667
            L  FW+   + ++ + NK++R+KDAM Q Y  LQ  K S + + RHEIS L+ PM QALD
Sbjct: 543  LQHFWSSYPITTSVLYNKVQRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALD 602

Query: 1668 A 1670
            A
Sbjct: 603  A 603


>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
            gi|557555944|gb|ESR65958.1| hypothetical protein
            CICLE_v10007802mg [Citrus clementina]
          Length = 564

 Score =  404 bits (1039), Expect = e-110
 Identities = 233/542 (42%), Positives = 327/542 (60%), Gaps = 18/542 (3%)
 Frame = +3

Query: 99   STNMKLHVQFRNIQGQKFSKHGS-KQALLNLIRDPSAKRAGFIFEFDSFESRDVCRDLVG 275
            ++  KL V+F++IQG K++K GS K  L+NL    +A+   +IFEFDS+    VCRD V 
Sbjct: 8    NSGAKLVVEFKSIQGHKYTKEGSNKPPLINLA---NAQGGSYIFEFDSYSDLHVCRDFVS 64

Query: 276  EILRNNQNVC--------------QLTKAEAELTKKLLQKDSDLRKLYTELVTENILTEP 413
            ++L  ++                 QL++ E +L  KLLQ++S+L+KL+ + V  NILTE 
Sbjct: 65   KVLEKSKETPNAALEKSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEA 124

Query: 414  EFWTTRKHLLDEAVS--TRQRKGLKSVMLTDFSPVQDGQSNKVTFHLAPESIHQIFAEKP 587
            EFW  RK LLD   S  ++QR G KS M++D  P  DG++NKVTF L PE I QIFAEKP
Sbjct: 125  EFWAARKKLLDRDPSKKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKP 184

Query: 588  AVRRAYLMNVPFKMKEIEFWNKYCRSEYLYRTDNXXXXXXXXXXXXXXXQFL-DDESLVN 764
            AV RA+L  VP KM E+EFW KYCR+EYL RT N                FL +D+ L N
Sbjct: 185  AVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILAN 244

Query: 765  EARCKIRKVDPAVDMAHNYADDYSHLSGHGTAQDSGRERIDEDANQSKRTLVRDINRHAA 944
            E R KIR+VDP +DM  +  DDY+HL  HG  +D  +E  +  +   +RTL++D+NRHAA
Sbjct: 245  EVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQSEHYRRTLLQDLNRHAA 304

Query: 945  VVLEGQALSDCDFGNTRTVAEALERTEQDNAEVAAATVDNLSDERCKDGFHEMSKIEDLQ 1124
            VVLEG+ +      +TR +AEAL R+++ N        DN ++E   D    +++IEDLQ
Sbjct: 305  VVLEGRTIDVEREDSTRALAEALARSKRGNEGA-----DNNANEERLDRTPRVAEIEDLQ 359

Query: 1125 ATQTDPYASLCIRDHRKYFSSQQASPMHAQSDRRYLGKAEHFNPDEIYGSLAYALLGIRE 1304
            A    P A L I+D R+YF SQQA+ + A  D +   K    +  E YGS+  A+  I++
Sbjct: 360  APHCLPLAPLSIKDAREYFDSQQANTLKASRDSQASMKCS-LSRQEAYGSVRDAISEIKD 418

Query: 1305 SGLKDPILNAESAVKAQNNLSQFISSTKYHNGKKAQKDVCSNLPKQERDKLREQWKTIQE 1484
             GL DPI+N E A+K  + L+  ISS KYH GK  ++ V   LP   ++KL   W +IQE
Sbjct: 419  MGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQE 478

Query: 1485 MLCQFWACCLVNSTFVSNKIRRLKDAMAQKYDNLQSAKASTKVEYRHEISLLIHPMLQAL 1664
            +L  FW+   + + ++ +K+ RLKDA++  Y  L+  K S   + RH++SLL+ PM QAL
Sbjct: 479  LLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQAL 538

Query: 1665 DA 1670
            DA
Sbjct: 539  DA 540


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum lycopersicum]
          Length = 599

 Score =  404 bits (1037), Expect = e-110
 Identities = 256/573 (44%), Positives = 342/573 (59%), Gaps = 20/573 (3%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSKH-GSKQALLNL 188
            K SV  PGVPG L L++  F F P+DPTL+T  KL+V+F+ I+G K SK   SKQALLNL
Sbjct: 13   KTSVKVPGVPGVLKLTKERFYFMPNDPTLTT--KLNVEFKLIKGHKSSKECSSKQALLNL 70

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLV-------GEILRNNQNVC------QLTKAEAE 329
             +   A+   ++FEFDSF  RD CRD V       GEI +            QL+  E  
Sbjct: 71   TQ---AQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVPHDEQLSATEMG 127

Query: 330  LTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVSTR--QRKGLKSVMLTDF 503
               KLLQ++S+L+ L+ ELV   IL+E EFW  RK LL+++ + +  QR  LK+ M +  
Sbjct: 128  RRIKLLQENSELQNLHRELVIAGILSETEFWAARKKLLEQSENKKPKQRVALKNDMWS-V 186

Query: 504  SPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYRT 683
             P+ DGQ+N+VTF+L PE IHQIFAEKPAVR+AYL  VP KM E EFW KY R+EYL+ T
Sbjct: 187  KPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHST 246

Query: 684  DNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGTA 860
             N                FL  D+ LV+EAR KIR+VDP +DM  +  DDY HL  HG  
Sbjct: 247  KNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLP 306

Query: 861  QDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNAE 1040
            Q   +E ++      KR+  + +N+HAAVVL+G+ + D + G+TR+VAEA  RT Q  AE
Sbjct: 307  QGETKEILEPQYEPFKRSFSQYLNQHAAVVLQGRVI-DVELGDTRSVAEAFTRTNQ--AE 363

Query: 1041 VAAATVD-NLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHAQS 1217
             A    D N   ER K     +++IEDLQ  +  P A L I+D R YF SQQA+ + A  
Sbjct: 364  QATEVSDENAYRERVKK-VSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKALG 422

Query: 1218 DRRYLGKAEHF--NPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKY 1391
            D     +   F  + +E + SL  ++  I   GL +PI++ E A+K  N LSQ ISSTKY
Sbjct: 423  DAETGIRQLKFRVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNLLSQNISSTKY 482

Query: 1392 HNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQ 1571
            H GK   + V   LP   +++L   W +IQE+L  FW+   + + +   K+ RLKDAM+Q
Sbjct: 483  HLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQ 542

Query: 1572 KYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
             Y  LQ  K S + + RH++SLL+ PMLQALDA
Sbjct: 543  IYPKLQEIKESVQSDVRHQVSLLVQPMLQALDA 575


>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum tuberosum]
          Length = 599

 Score =  403 bits (1035), Expect = e-109
 Identities = 256/573 (44%), Positives = 342/573 (59%), Gaps = 20/573 (3%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSKH-GSKQALLNL 188
            K SV  PGVPG L L++  F F P+DPTL+T  KL+V+F+ I+G K SK   SKQALLNL
Sbjct: 13   KTSVKVPGVPGVLKLTKERFYFMPNDPTLTT--KLNVEFKLIKGHKSSKECSSKQALLNL 70

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLV-------GEILRNNQNVC------QLTKAEAE 329
             +   A+   ++FEFDSF  RD CRD V       GEI +            QL+  E  
Sbjct: 71   TQ---AQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVPHDEQLSATEMG 127

Query: 330  LTKKLLQKDSDLRKLYTELVTENILTEPEFWTTRKHLLDEAVSTR--QRKGLKSVMLTDF 503
               KLLQ++S+L+KL+ +LV   IL+E EFW  RK LL+++ + +  QR  LK+ M +  
Sbjct: 128  RRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSENKKPKQRVALKNDMWS-V 186

Query: 504  SPVQDGQSNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYRT 683
             P+ DGQ+N+VTF+L PE IHQIFAEKPAVR+AYL  VP KM E EFW KY R+EYL+ T
Sbjct: 187  KPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHST 246

Query: 684  DNXXXXXXXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGTA 860
             N                FL  D+ LV+EAR KIR+VDP +DM  +  DDY HL  HG  
Sbjct: 247  KNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLP 306

Query: 861  QDSGRERIDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNAE 1040
            Q   +E ++      KR+  + +N+HAAVVL G+ + D + G+TR+VAEA  RT Q  AE
Sbjct: 307  QGETKEILEPQYEPFKRSFSQYLNQHAAVVLRGRVI-DVELGDTRSVAEAFTRTYQ--AE 363

Query: 1041 VAAATVD-NLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHAQS 1217
             A    D N   ER K     +++IEDLQ  Q  P A L I+D R YF SQQA+ + A  
Sbjct: 364  QATEVSDENAYRERVKK-VSRVAEIEDLQGPQDPPVALLSIKDPRDYFDSQQANAIKALG 422

Query: 1218 DRRYLGKAEHFN--PDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKY 1391
            D     +   F+   +E + SL  ++  I   GL +PI++ E A+K  N LSQ ISSTKY
Sbjct: 423  DAETGIRQLKFSVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTKY 482

Query: 1392 HNGKKAQKDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQ 1571
            + GK   + V   LP   +++L   W +IQE+L  FW+   + + +   K+ RLKDAM+Q
Sbjct: 483  YLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQ 542

Query: 1572 KYDNLQSAKASTKVEYRHEISLLIHPMLQALDA 1670
             Y  LQ  K S + + RH++SLL+ PMLQALDA
Sbjct: 543  IYPKLQEIKESVQSDVRHQVSLLVQPMLQALDA 575


>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Cicer arietinum]
          Length = 586

 Score =  400 bits (1028), Expect = e-109
 Identities = 237/566 (41%), Positives = 333/566 (58%), Gaps = 13/566 (2%)
 Frame = +3

Query: 12   KPSVTDPGVPGNLVLSETDFVFTPSDPTLSTNMKLHVQFRNIQGQKFSKHGS-KQALLNL 188
            K +V DPG PG L L++   VF P+DPT  +N ++ V FR I+  K +K GS K   LNL
Sbjct: 14   KTTVKDPGTPGVLKLTQEKLVFKPNDPT--SNNRVEVDFRLIKNHKHTKEGSNKPPWLNL 71

Query: 189  IRDPSAKRAGFIFEFDSFESRDVCRDLVGEILRNNQNVC------QLTKAEAELTKKLLQ 350
                   +  +IFE ++F    VCR+LVG  L  +          QL+ AE  L  KLLQ
Sbjct: 72   ----GHSQGSYIFELENFSDLHVCRELVGIALSKHVEPPKVVSDEQLSPAEMTLRIKLLQ 127

Query: 351  KDSDLRKLYTELVTENILTEPEFWTTRKHLLD--EAVSTRQRKGLKSVMLTDFSPVQDGQ 524
            +DS L+KL+ +LV    LTE EFW T+K LLD  E+   +QR G K+ ++ D  P  DG+
Sbjct: 128  EDSKLQKLHKDLVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDTKPTSDGR 187

Query: 525  SNKVTFHLAPESIHQIFAEKPAVRRAYLMNVPFKMKEIEFWNKYCRSEYLYRTDNXXXXX 704
             N+V F L PE  +QIFA KPAV +A+L  VP KM E++FWNKY ++EY++ T N     
Sbjct: 188  INQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMSEVDFWNKYFKAEYIHSTKNTIAAA 247

Query: 705  XXXXXXXXXXQFL-DDESLVNEARCKIRKVDPAVDMAHNYADDYSHLSGHGTAQDSGRER 881
                       FL DDE L NEAR K+R+VDP +DM  +  DDY+HL  HG  +D  +E 
Sbjct: 248  AEAAEDEDLAVFLKDDEILENEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKET 307

Query: 882  IDEDANQSKRTLVRDINRHAAVVLEGQALSDCDFGNTRTVAEALERTEQDNAEVAAATVD 1061
             +      +RTL++D+NR + VVLEG+ L D D  + RTVAE L R +Q++        D
Sbjct: 308  AEAQNTFYRRTLLQDLNRQSEVVLEGKTL-DMDMEHPRTVAEVLARRKQES--------D 358

Query: 1062 NLSDERCKDGFHEMSKIEDLQATQTDPYASLCIRDHRKYFSSQQASPMHAQSDRRYLGKA 1241
             + +E  ++   +M++IEDLQA     +A LCI+D R YF SQQ + + +  D    GK 
Sbjct: 359  GVIEEERRNRISKMTQIEDLQAQDDHRFAPLCIKDPRDYFDSQQVNALKSLDDS-LAGKE 417

Query: 1242 E---HFNPDEIYGSLAYALLGIRESGLKDPILNAESAVKAQNNLSQFISSTKYHNGKKAQ 1412
            +   +   +E YGSL  ++  I+  GL DP+L+ E A K  N L++ ISSTK H GK +Q
Sbjct: 418  QIRCNLGSEEAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNGLTKNISSTKSHLGKSSQ 477

Query: 1413 KDVCSNLPKQERDKLREQWKTIQEMLCQFWACCLVNSTFVSNKIRRLKDAMAQKYDNLQS 1592
            + V   LP   ++KL + W   QE+L  FW+   V +  + NK +R+KDA++Q Y  L+ 
Sbjct: 478  ESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNKTKRMKDAISQIYSKLEE 537

Query: 1593 AKASTKVEYRHEISLLIHPMLQALDA 1670
             K S K + RH++SL++HPM QALDA
Sbjct: 538  IKVSAKSDLRHQVSLVVHPMQQALDA 563