BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025885
         (485 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [A...   144   9e-33
ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Caps...   124   2e-26
ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495...   114   2e-23
ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab...   107   2e-21
ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911...   106   4e-21
ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777...   105   6e-21
gb|AAM61481.1| unknown [Arabidopsis thaliana]                         105   6e-21
gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis]     104   1e-20
ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Ch...    97   2e-18
ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutr...    96   5e-18
ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus c...    96   6e-18
ref|XP_002327104.1| predicted protein [Populus trichocarpa] gi|5...    95   1e-17
ref|XP_002953456.1| hypothetical protein VOLCADRAFT_82305 [Volvo...    93   4e-17
ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutr...    90   4e-16
ref|XP_004513105.1| PREDICTED: protein OSB2, chloroplastic-like ...    89   6e-16
ref|XP_006398112.1| hypothetical protein EUTSA_v10000889mg [Eutr...    87   2e-15
ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, part...    87   2e-15
ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidop...    87   3e-15
dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]                 87   3e-15
ref|XP_002330744.1| predicted protein [Populus trichocarpa]            87   3e-15

>ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [Amborella trichopoda]
           gi|548848280|gb|ERN07383.1| hypothetical protein
           AMTR_s00019p00240430 [Amborella trichopoda]
          Length = 500

 Score =  144 bits (364), Expect = 9e-33
 Identities = 78/160 (48%), Positives = 91/160 (56%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFATSPS 302
           LFADPS W D RK K    HPDF HKET +ALW+D  +   WV   LS L+         
Sbjct: 307 LFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPKAE-WV---LSKLKTLEIDQRQD 362

Query: 301 IEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQDE 122
               W+  FAD SKW D RK K    HPDFKHK+TGEALW+D  + P W   KL  L+ +
Sbjct: 363 KGHLWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTLEID 421

Query: 121 AFATSPPKDDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
               +   +DLWK L A+  KW DNR  K N K PDFKHK
Sbjct: 422 Q-RQNKDSNDLWKDLVANRDKWWDNRLSKVNPKAPDFKHK 460



 Score =  141 bits (356), Expect = 8e-32
 Identities = 77/168 (45%), Positives = 97/168 (57%), Gaps = 8/168 (4%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTA-FATSP 305
           LFA P  W+D R  K++ ++PDF +K +++ALW+D K  P  V   L + +  A FA   
Sbjct: 233 LFAKPYNWYDNRFDKRNPRYPDFRNKNSKEALWLD-KHTPDSVLSALESPEFCAKFANGQ 291

Query: 304 SIEE-------HWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATH 146
            IE+        W+  FAD SKW D RK K    HPDFKHK+TGEALW+D  +   W   
Sbjct: 292 KIEKIRADIGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPKAE-WVLS 350

Query: 145 KLNNLQDEAFATSPPKDDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
           KL  L+ +       K  LW+ LFADPSKW DNRK K    HPDFKHK
Sbjct: 351 KLKTLEID---QRQDKGHLWEDLFADPSKWCDNRKVKTQPTHPDFKHK 395



 Score =  103 bits (258), Expect = 2e-20
 Identities = 54/114 (47%), Positives = 67/114 (58%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFATSPS 302
           LFADPS W D RK K    HPDF HKET +ALW+D  + P WV   L  L+        S
Sbjct: 370 LFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTLEIDQRQNKDS 428

Query: 301 IEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHKL 140
             + WK   A+R KW+D R +K   K PDFKHKD+G+ LW++ + TP WA   L
Sbjct: 429 -NDLWKDLVANRDKWWDNRLSKVNPKAPDFKHKDSGKGLWLNGS-TPDWALTNL 480



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
 Frame = -2

Query: 304 SIEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQD 125
           ++E  WK  FA    W+D R  K+  ++PDF++K++ EALW+ D  TP      L + + 
Sbjct: 225 AVEGLWKELFAKPYNWYDNRFDKRNPRYPDFRNKNSKEALWL-DKHTPDSVLSALESPEF 283

Query: 124 EA-FATSPPKDDL-------WKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
            A FA     + +       W+ LFADPSKW DNRK K    HPDFKHK
Sbjct: 284 CAKFANGQKIEKIRADIGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHK 332


>ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Capsella rubella]
           gi|482549189|gb|EOA13383.1| hypothetical protein
           CARUB_v10026422mg [Capsella rubella]
          Length = 437

 Score =  124 bits (310), Expect = 2e-26
 Identities = 73/178 (41%), Positives = 91/178 (51%), Gaps = 18/178 (10%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P  WFD R  K +     KHPDF  K    +LW+    +P W    L  L+   F 
Sbjct: 232 LIENPKEWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLST--VPDWALLKLDELEFDVFV 289

Query: 313 TSPSI-------EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIW 155
            +  I       EE WK    +  KWFD R  K   K PDFKHK+TGEALW+ D  +PIW
Sbjct: 290 PNGDIKLKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEALWMTD--SPIW 347

Query: 154 ATHKLNNL---QDEAFATSP----PKDDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
              KL  L   Q+    ++      K++ WK+L  DPSKW DNR  K+N K PDFKHK
Sbjct: 348 VLSKLPPLKKNQERPLMSNTVSLHKKEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHK 405



 Score =  100 bits (250), Expect = 2e-19
 Identities = 55/125 (44%), Positives = 71/125 (56%), Gaps = 7/125 (5%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWV----NPMLSNLQDTAFA 314
           L  +P  WFD R  K + K PDF HKET +ALW+ D   P WV     P+  N +    +
Sbjct: 308 LVQNPDKWFDNRSEKTNVKAPDFKHKETGEALWMTDS--PIWVLSKLPPLKKNQERPLMS 365

Query: 313 TSPSI---EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHK 143
            + S+   EE WK    D SKW+D R  K+  K PDFKHK+TGEALWI  + +P WA  +
Sbjct: 366 NTVSLHKKEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWI--SSSPTWALSE 423

Query: 142 LNNLQ 128
           L  L+
Sbjct: 424 LPPLE 428



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
 Frame = -2

Query: 289 WKAFFADRSKWFDYRKTKKT----DKHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQDE 122
           WK    +  +WFD+R  K       KHPDFK K  G +LW+  +  P WA  KL+ L+ +
Sbjct: 229 WKHLIENPKEWFDHRGNKANGLVKPKHPDFKRKAGGLSLWL--STVPDWALLKLDELEFD 286

Query: 121 AFATSP-------PKDDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
            F  +          ++ WK L  +P KW DNR  K N K PDFKHK
Sbjct: 287 VFVPNGDIKLKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHK 333


>ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495963|gb|AES77166.1|
           Protein OSB3 [Medicago truncatula]
          Length = 491

 Score =  114 bits (284), Expect = 2e-23
 Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  DP  W+D R +K++     K+PDF  K+   ++W+D          +LS L++  F 
Sbjct: 281 LLDDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKAS-----KSVLSRLKELEFD 335

Query: 313 TSP---------SIEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTP 161
           T P           +E W     + +KW+D R  KK  + PDFKHKDTG  LW+ D  +P
Sbjct: 336 TPPVKPKQTKDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRD--SP 393

Query: 160 IWATHKLNNLQDEAFAT-------SPPKDDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
            W + +L  L+ E+ +        S   D+ W  L  +P+KW DNR  KKN K PDFKHK
Sbjct: 394 SWVSSRLKELEVESTSVKSKQAKDSKGSDESWNDLLQNPAKWWDNRLDKKNPKGPDFKHK 453



 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFAT--- 311
           L  +P+ W+D R  KK  + PDF HK+T   LW+ D   P+WV+  L  L+  + +    
Sbjct: 356 LLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRDS--PSWVSSRLKELEVESTSVKSK 413

Query: 310 ----SPSIEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHK 143
               S   +E W     + +KW+D R  KK  K PDFKHKDTGEALW+    +P W   K
Sbjct: 414 QAKDSKGSDESWNDLLQNPAKWWDNRLDKKNPKGPDFKHKDTGEALWL--RGSPSWVLPK 471

Query: 142 LNNLQ 128
           L  L+
Sbjct: 472 LPPLK 476



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
 Frame = -2

Query: 469 PSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFATSPSIEEH 290
           PS W      K+S K+ DF  K   +            + P L     +A   + S+   
Sbjct: 230 PSQWKAVHSPKESPKNADFESKTEGE------------LQPGLKQSTTSAKKYTGSLSST 277

Query: 289 WKAFFADRSKWFDYRKTKK----TDKHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQDE 122
           W     D  KW+D+R +K+      K+PDFK KD   ++W+D     +     L+ L++ 
Sbjct: 278 WGDLLDDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKSV-----LSRLKEL 332

Query: 121 AFATSPPK---------DDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
            F T P K         D+ W  L  +P+KW DNR  KK  + PDFKHK
Sbjct: 333 EFDTPPVKPKQTKDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHK 381


>ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
           lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein
           ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  107 bits (267), Expect = 2e-21
 Identities = 67/192 (34%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P  W D R  K +      HPDF  K    +LW+     P W  P L  L+     
Sbjct: 221 LIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALPKLKELEFDVLV 278

Query: 313 TSPSI-------EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIW 155
              +I       EE WK    +  KW D R  K   K+PDFKHK+TGEALW+    +PIW
Sbjct: 279 PKGNIKLNQLKGEESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWM--TNSPIW 336

Query: 154 ATHKL----NNLQDEAFATSPP-----------------KDDLWKSLFADPSKWVDNRKF 38
              KL     N +    + + P                 +++ WK+L  +PSKW DNR  
Sbjct: 337 VLSKLPPLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLD 396

Query: 37  KKNNKHPDFKHK 2
           K+N K PDFKHK
Sbjct: 397 KRNPKAPDFKHK 408



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 54/139 (38%), Positives = 71/139 (51%), Gaps = 21/139 (15%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWV------------NPMLS 338
           L  +P  W D R  K + K+PDF HKET +ALW+ +   P WV             P++S
Sbjct: 297 LVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWMTNS--PIWVLSKLPPLKKNQERPLMS 354

Query: 337 N---------LQDTAFATSPSIEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEAL 185
           N         +      T    EE WK    + SKW+D R  K+  K PDFKHK+TGE L
Sbjct: 355 NTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKAPDFKHKETGEVL 414

Query: 184 WIDDNRTPIWATHKLNNLQ 128
           WI++N +P WA  KL  L+
Sbjct: 415 WINNN-SPTWALSKLPPLK 432


>ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
           gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein
           OSB3, chloroplastic/mitochondrial; AltName:
           Full=Organellar single-stranded DNA-binding protein 3;
           Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown
           protein [Arabidopsis thaliana]
           gi|28973013|gb|AAO63831.1| unknown protein [Arabidopsis
           thaliana] gi|30102734|gb|AAP21285.1| At5g44785
           [Arabidopsis thaliana] gi|110743279|dbj|BAE99530.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis
           thaliana]
          Length = 440

 Score =  106 bits (264), Expect = 4e-21
 Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 32/192 (16%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P  W D R  K +      HPDF  K    +LW+     P W    L  L+     
Sbjct: 221 LIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALLKLEELKFDVLV 278

Query: 313 TSPSI-------EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIW 155
              +I       EE WK    +  KW D R  K   K+PDFKHK+TGEALW+    +PIW
Sbjct: 279 PKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIW 336

Query: 154 ATHKLNNL---QDEAFATSP------------------PKDDLWKSLFADPSKWVDNRKF 38
              KL  L   Q+  F ++                    ++++WK+L  +PSKW DNR  
Sbjct: 337 VLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLD 396

Query: 37  KKNNKHPDFKHK 2
           K+N K PDFKHK
Sbjct: 397 KRNPKGPDFKHK 408



 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 55/139 (39%), Positives = 70/139 (50%), Gaps = 21/139 (15%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWVN---PMLSNLQDTAFAT 311
           L  +P  W D R  K + K+PDF HKET +ALW+ +   P WV    P L   Q+  F +
Sbjct: 297 LVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNS--PIWVLSKLPPLKKNQERPFMS 354

Query: 310 SP------------------SIEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEAL 185
           +                     EE WK    + SKW+D R  K+  K PDFKHK+TGEAL
Sbjct: 355 NKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEAL 414

Query: 184 WIDDNRTPIWATHKLNNLQ 128
           WI D  +P WA  KL  L+
Sbjct: 415 WIGD--SPTWALSKLPPLK 431


>ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1|
           protein OSB3 [Arabidopsis thaliana]
          Length = 442

 Score =  105 bits (262), Expect = 6e-21
 Identities = 67/194 (34%), Positives = 88/194 (45%), Gaps = 34/194 (17%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P  W D R  K +      HPDF  K    +LW+     P W    L  L+     
Sbjct: 221 LIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALLKLEELKFDVLV 278

Query: 313 TSPSI---------EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTP 161
              +I         EE WK    +  KW D R  K   K+PDFKHK+TGEALW+    +P
Sbjct: 279 PKGNIKLNQLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSP 336

Query: 160 IWATHKLNNL---QDEAFATSP------------------PKDDLWKSLFADPSKWVDNR 44
           IW   KL  L   Q+  F ++                    ++++WK+L  +PSKW DNR
Sbjct: 337 IWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNR 396

Query: 43  KFKKNNKHPDFKHK 2
             K+N K PDFKHK
Sbjct: 397 LDKRNPKGPDFKHK 410



 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 55/139 (39%), Positives = 70/139 (50%), Gaps = 21/139 (15%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWVN---PMLSNLQDTAFAT 311
           L  +P  W D R  K + K+PDF HKET +ALW+ +   P WV    P L   Q+  F +
Sbjct: 299 LVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNS--PIWVLSKLPPLKKNQERPFMS 356

Query: 310 SP------------------SIEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEAL 185
           +                     EE WK    + SKW+D R  K+  K PDFKHK+TGEAL
Sbjct: 357 NKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEAL 416

Query: 184 WIDDNRTPIWATHKLNNLQ 128
           WI D  +P WA  KL  L+
Sbjct: 417 WIGD--SPTWALSKLPPLK 433


>gb|AAM61481.1| unknown [Arabidopsis thaliana]
          Length = 440

 Score =  105 bits (262), Expect = 6e-21
 Identities = 67/192 (34%), Positives = 85/192 (44%), Gaps = 32/192 (16%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P  W D R  K +      HPDF  K    +LW+     P W    L  L+     
Sbjct: 221 LIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTA--PDWALLKLEELKFDVLV 278

Query: 313 TSPSI-------EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIW 155
              +I       EE WK    +  KW D R  K   K+PDFKHK+TGEALW+    +PIW
Sbjct: 279 PKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIW 336

Query: 154 ATHKL-------------NNLQDEAFATSPPK--------DDLWKSLFADPSKWVDNRKF 38
              KL             N +         PK        +++WK+L  +PSKW DNR  
Sbjct: 337 VLSKLPPLKKNQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLD 396

Query: 37  KKNNKHPDFKHK 2
           K+N K PDFKHK
Sbjct: 397 KRNPKGPDFKHK 408



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 55/139 (39%), Positives = 72/139 (51%), Gaps = 21/139 (15%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWV------------NPMLS 338
           L  +P  W D R  K + K+PDF HKET +ALW+ +   P WV             P++S
Sbjct: 297 LVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNS--PIWVLSKLPPLKKNQERPLMS 354

Query: 337 N----LQDTAFATSPSI-----EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEAL 185
           N    L+        ++     EE WK    + SKW+D R  K+  K PDFKHK+TGEAL
Sbjct: 355 NKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEAL 414

Query: 184 WIDDNRTPIWATHKLNNLQ 128
           WI D  +P WA  KL  L+
Sbjct: 415 WIGD--SPTWALSKLPPLK 431


>gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis]
          Length = 380

 Score =  104 bits (259), Expect = 1e-20
 Identities = 66/185 (35%), Positives = 89/185 (48%), Gaps = 25/185 (13%)
 Frame = -2

Query: 481 LFADPSVWFDERKTK----KSKKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQ-DTAF 317
           L  +P  W+D R  K     S+K+PDF+HK+ R+ +W++  R P  V   L  LQ D   
Sbjct: 162 LLENPKQWWDNRDKKCNRSVSQKYPDFIHKDDRRGVWLN--RAPRSVLIELEGLQFDVQI 219

Query: 316 ATSPSIEEH-----------WKAFFADRSKWFDYRKTKKTD----KHPDFKHKDTGEALW 182
             S  +E+            W+    +  +W DYR +K       ++PDFKHKD   ALW
Sbjct: 220 KNSTEVEQFKGAKKDGDSASWRDLIDNSEQWKDYRNSKLNGLVNPRYPDFKHKDGSLALW 279

Query: 181 IDDNRTPIWATHKLNNLQ-DEAF----ATSPPKDDLWKSLFADPSKWVDNRKFKKNNKHP 17
           +     P W + +L  L+ D  F    A    KD+LWK L   P KW DNR  K     P
Sbjct: 280 LSS--APQWVSLQLEGLKFDGGFKKPKAVKANKDELWKDLVEHPEKWWDNRLGKLKENSP 337

Query: 16  DFKHK 2
           DFKHK
Sbjct: 338 DFKHK 342



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
 Frame = -2

Query: 460 WFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQ-DTAF----ATS 308
           W D R +K +     ++PDF HK+   ALW+     P WV+  L  L+ D  F    A  
Sbjct: 250 WKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSSA--PQWVSLQLEGLKFDGGFKKPKAVK 307

Query: 307 PSIEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHKL---N 137
            + +E WK       KW+D R  K  +  PDFKHK+TGE LW+    +P W   KL    
Sbjct: 308 ANKDELWKDLVEHPEKWWDNRLGKLKENSPDFKHKETGEGLWL--RSSPTWVLSKLPPPK 365

Query: 136 NLQDEAF 116
           + QD +F
Sbjct: 366 SKQDSSF 372


>ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Chlamydomonas
           reinhardtii] gi|37545634|gb|AAM76787.1| RNA-binding
           protein RB38 [Chlamydomonas reinhardtii]
           gi|37723144|gb|AAP30010.1| 38 kDa RNA-binding protein
           [Chlamydomonas reinhardtii] gi|158270704|gb|EDO96540.1|
           chloroplast-targeted RNA-binding protein [Chlamydomonas
           reinhardtii]
          Length = 382

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 46/207 (22%)
 Frame = -2

Query: 484 SLFADPSVWFDERKTKKSKKHPDFVHKETRK-ALWIDDKRIPAWVNPMLSNLQDTAFATS 308
           +L ++P  W+D R  K S + PDFV ++ R  ALW+D + +P WV+ +L+ L +   A  
Sbjct: 143 ALRSNPDEWYDNRNRKTSDRQPDFVRRDDRNSALWLDSRGVPEWVDELLAELDERQAARR 202

Query: 307 PS----------------------IEE--HWKAFFADRSKWFDYRKTKKTDKHPDFKHKD 200
                                    EE  +W++  A+  +W+D R  K +D+ PDF  +D
Sbjct: 203 EQRVAERAAGGGDERQEGGGGRRGAEELANWESLRANPIEWYDNRSRKTSDRQPDFVRRD 262

Query: 199 TGEA-LWIDDNRTPIWATHKLNNLQDEAFA----------TSPPKDDL----------WK 83
              A LW+D    P W    L  L   A A           +P   +L          W+
Sbjct: 263 DRRAALWLDSRGAPPWVGDLLAELDAAAQARRQQRQAERSAAPSTPELEAKRAAEAANWE 322

Query: 82  SLFADPSKWVDNRKFKKNNKHPDFKHK 2
           SL A+P  W DNR  K+  K PDF+ K
Sbjct: 323 SLRANPEAWFDNRNNKQTPKSPDFRKK 349



 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 52/209 (24%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRK-ALWIDDKRIPAWVNPMLSNLQDTAF---- 317
           L ++P  W+D R  K + K PDFV K+ R  ALWID + +P WV  +L +L         
Sbjct: 50  LRSNPDEWYDNRTRKTNPKAPDFVRKDDRAVALWIDGRDVPTWVEELLHDLDSRQVNRRQ 109

Query: 316 -ATSPSIEE---------------------HWKAFFADRSKWFDYRKTKKTDKHPDF-KH 206
              S S +E                     +W+A  ++  +W+D R  K +D+ PDF + 
Sbjct: 110 QRDSESGDERGGRGERRSGPGGGRQAAEAANWEALRSNPDEWYDNRNRKTSDRQPDFVRR 169

Query: 205 KDTGEALWIDDNRTPIWATHKLNNLQDEAFATSPPK----------------------DD 92
            D   ALW+D    P W    L  L +   A    +                      ++
Sbjct: 170 DDRNSALWLDSRGVPEWVDELLAELDERQAARREQRVAERAAGGGDERQEGGGGRRGAEE 229

Query: 91  L--WKSLFADPSKWVDNRKFKKNNKHPDF 11
           L  W+SL A+P +W DNR  K +++ PDF
Sbjct: 230 LANWESLRANPIEWYDNRSRKTSDRQPDF 258



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 22/140 (15%)
 Frame = -2

Query: 484 SLFADPSVWFDERKTKKSKKHPDFVHKETRK-ALWIDDKRIPAWVNPMLSNLQDTAFA-- 314
           SL A+P  W+D R  K S + PDFV ++ R+ ALW+D +  P WV  +L+ L   A A  
Sbjct: 235 SLRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALWLDSRGAPPWVGDLLAELDAAAQARR 294

Query: 313 -----------TSPSIE-------EHWKAFFADRSKWFDYRKTKKTDKHPDFKHK-DTGE 191
                      ++P +E        +W++  A+   WFD R  K+T K PDF+ K D  +
Sbjct: 295 QQRQAERSAAPSTPELEAKRAAEAANWESLRANPEAWFDNRNNKQTPKSPDFRKKDDRTQ 354

Query: 190 ALWIDDNRTPIWATHKLNNL 131
           ALW+     P W    L+ L
Sbjct: 355 ALWVTSYGAPEWLNELLSEL 374



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 27/121 (22%)
 Frame = -2

Query: 292 HWKAFFADRSKWFDYRKTKKTDKHPDFKHK-DTGEALWIDDNRTPIWATHKLNNLQDEAF 116
           +W+   ++  +W+D R  K   K PDF  K D   ALWID    P W    L++L     
Sbjct: 46  NWEQLRSNPDEWYDNRTRKTNPKAPDFVRKDDRAVALWIDGRDVPTWVEELLHDLDSRQV 105

Query: 115 ATSPPKDD--------------------------LWKSLFADPSKWVDNRKFKKNNKHPD 14
                +D                            W++L ++P +W DNR  K +++ PD
Sbjct: 106 NRRQQRDSESGDERGGRGERRSGPGGGRQAAEAANWEALRSNPDEWYDNRNRKTSDRQPD 165

Query: 13  F 11
           F
Sbjct: 166 F 166


>ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutrema salsugineum]
           gi|557090107|gb|ESQ30815.1| hypothetical protein
           EUTSA_v10011640mg [Eutrema salsugineum]
          Length = 329

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 46/118 (38%), Positives = 67/118 (56%)
 Frame = -2

Query: 484 SLFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFATSP 305
           + FA+P  W+D+R+ KK+ K PDF HK+T +A W+     P WV   L            
Sbjct: 200 AFFANPDEWWDKRRNKKNPKQPDFKHKDTNEAFWLGSDT-PVWVTRQLELFD-------- 250

Query: 304 SIEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHKLNNL 131
             ++    FFA+  +W+D R+ K   + PDFKHKDTGEALW+  + TP+W + +L  L
Sbjct: 251 --QKRPDVFFANPQEWWDNRRDKLNPRWPDFKHKDTGEALWLHSD-TPVWVSRQLELL 305



 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 45/96 (46%), Positives = 57/96 (59%)
 Frame = -2

Query: 289 WKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQDEAFAT 110
           W AFFA+  +W+D R+ KK  K PDFKHKDT EA W+  + TP+W T +L     E F  
Sbjct: 198 WNAFFANPDEWWDKRRNKKNPKQPDFKHKDTNEAFWLGSD-TPVWVTRQL-----ELFDQ 251

Query: 109 SPPKDDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
             P        FA+P +W DNR+ K N + PDFKHK
Sbjct: 252 KRP-----DVFFANPQEWWDNRRDKLNPRWPDFKHK 282


>ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus communis]
           gi|223531010|gb|EEF32864.1| hypothetical protein
           RCOM_1716690 [Ricinus communis]
          Length = 281

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 59/184 (32%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKSKKHPDFVHKETRKALWIDDKRIPAWVNPMLSNL---------- 332
           L   P  W+D R    + K   F  K+  + L+ID    P W+   L  +          
Sbjct: 72  LLTSPHEWWDIRSQVDNPKGASFERKKNGELLYIDHAT-PKWIQEKLEGMAFDKKTTVEG 130

Query: 331 -QDTAFATSPSIEEHWKAFFADRSKWFDYRKTKKTD----KHPDFKHKDTGEALWIDDNR 167
            + +      S+   W+   +D  +W+DYR +K       KHPDFK KD   ALW+  N+
Sbjct: 131 GKGSMIKNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVALWL--NK 188

Query: 166 TPIWATHKLNNLQDEAFATSPPK---------DDLWKSLFADPSKWVDNRKFKKNNKHPD 14
            P W   +L  L+   F    PK         D  W  L   P+KW DNR  KKN ++PD
Sbjct: 189 APRWILSELEKLE---FDVQIPKSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNERYPD 245

Query: 13  FKHK 2
           FKHK
Sbjct: 246 FKHK 249



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 11/136 (8%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQ-DTAF 317
           L +DP  W+D R +K +     KHPDF  K+   ALW++  + P W+   L  L+ D   
Sbjct: 149 LASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLN--KAPRWILSELEKLEFDVQI 206

Query: 316 ATSPSIEEH-----WKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWA 152
             S  +++H     W       +KW+D R  KK +++PDFKHK+TG  LW+  + +P W 
Sbjct: 207 PKSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVGLWL--SNSPTWV 264

Query: 151 THKLNNLQ-DEAFATS 107
             +L  ++ D+  ATS
Sbjct: 265 LSELPPMKGDKNAATS 280



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
 Frame = -2

Query: 301 IEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQ-D 125
           +E+ WK       +W+D R      K   F+ K  GE L+I D+ TP W   KL  +  D
Sbjct: 65  VEQSWKDLLTSPHEWWDIRSQVDNPKGASFERKKNGELLYI-DHATPKWIQEKLEGMAFD 123

Query: 124 EAFATSPPKDDL----------WKSLFADPSKWVDNRKFKKNN----KHPDFKHK 2
           +       K  +          W+ L +DP +W D R  K N     KHPDFK K
Sbjct: 124 KKTTVEGGKGSMIKNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRK 178


>ref|XP_002327104.1| predicted protein [Populus trichocarpa]
           gi|566202259|ref|XP_006375003.1| hypothetical protein
           POPTR_0014s03490g [Populus trichocarpa]
           gi|550323317|gb|ERP52800.1| hypothetical protein
           POPTR_0014s03490g [Populus trichocarpa]
          Length = 371

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/126 (42%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
 Frame = -2

Query: 484 SLFADPSVWFDERKTKKSKKHPDFVHKETRKALWI--DDKRIPAWVNPMLSNLQDTAFAT 311
           + F+ P  W+D RK KK+ K PDF HK +  ALW+  DD   P W+   L  L D     
Sbjct: 227 AFFSSPHEWWDNRKFKKNSKLPDFKHKISGDALWLRPDD---PLWIKTKLQ-LLDWKAGE 282

Query: 310 SPSIEEH------WKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWAT 149
               E H      W+ FFA   +W+D RK KK    PDFKHKDTGEALW+  N  P W  
Sbjct: 283 HCEEERHKNHLYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWLSPNDPP-WVK 341

Query: 148 HKLNNL 131
            ++  L
Sbjct: 342 RQIQLL 347



 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = -2

Query: 289 WKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQDEAFAT 110
           WKAFF+   +W+D RK KK  K PDFKHK +G+ALW+  +  P+W   KL  L  +A   
Sbjct: 225 WKAFFSSPHEWWDNRKFKKNSKLPDFKHKISGDALWLRPD-DPLWIKTKLQLLDWKAGEH 283

Query: 109 SPPKDD-----LWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
              +       LW+  FA P +W DNRK KKN+  PDFKHK
Sbjct: 284 CEEERHKNHLYLWQVFFASPHEWWDNRKNKKNSASPDFKHK 324


>ref|XP_002953456.1| hypothetical protein VOLCADRAFT_82305 [Volvox carteri f.
           nagariensis] gi|300261215|gb|EFJ45429.1| hypothetical
           protein VOLCADRAFT_82305 [Volvox carteri f. nagariensis]
          Length = 413

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 64/204 (31%), Positives = 88/204 (43%), Gaps = 43/204 (21%)
 Frame = -2

Query: 484 SLFADPSVWFDERKTKKSKKHPDFVHKETRK-ALWIDDKRIPAWVNPMLSNLQ------- 329
           +L A+P+ W+D RK K + K PDFV K+ R  A+WID +  P W    L  L        
Sbjct: 46  ALRANPNEWYDNRKRKTNPKAPDFVRKDDRSVAIWIDGRDTPGWYEEFLDELDSRQGGQQ 105

Query: 328 --DTAFATSPSIEEH---------WKAFFADRSKWFDYRKTKKTDKHPDFKHKDT-GEAL 185
             D      P  + +         W++   +  +WFD R  K   + PDF+ KD    AL
Sbjct: 106 RGDRFGGDRPGGDRNDRRAAEMANWESLRNNPEEWFDNRSRKTNPRAPDFRRKDDRAVAL 165

Query: 184 WIDDNRTPIWATHKLNNL--------------QDEAFATSPPK--DDL-------WKSLF 74
           WID    P W    L+ L              Q   +  +P +  +D        W SL 
Sbjct: 166 WIDSYGAPEWLDDLLHELDARQSQRSSGYSQQQQGGYQQAPDQYVEDKRAAEMAKWDSLR 225

Query: 73  ADPSKWVDNRKFKKNNKHPDFKHK 2
           ++P  W DNR+ K N K PDFK K
Sbjct: 226 SNPELWFDNRRTKTNPKAPDFKLK 249



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
 Frame = -2

Query: 292 HWKAFFADRSKWFDYRKTKKTDKHPDFKHK-DTGEALWIDDNRTPIWATHKLNNL----- 131
           +W A  A+ ++W+D RK K   K PDF  K D   A+WID   TP W    L+ L     
Sbjct: 43  NWDALRANPNEWYDNRKRKTNPKAPDFVRKDDRSVAIWIDGRDTPGWYEEFLDELDSRQG 102

Query: 130 ---QDEAFATSPPKDDL----------WKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
              + + F    P  D           W+SL  +P +W DNR  K N + PDF+ K
Sbjct: 103 GQQRGDRFGGDRPGGDRNDRRAAEMANWESLRNNPEEWFDNRSRKTNPRAPDFRRK 158


>ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutrema salsugineum]
           gi|557115080|gb|ESQ55363.1| hypothetical protein
           EUTSA_v10025547mg [Eutrema salsugineum]
          Length = 360

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 10/124 (8%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQ-DTAF 317
           L  +P  W+D R+ K +     +HPDF +K+T  +LW++  + P WV P L  L+ D   
Sbjct: 228 LIENPKEWWDHRENKANGLVKPRHPDFKNKDTSVSLWLN--KAPDWVLPKLEGLEFDVLV 285

Query: 316 ATSPSI-----EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWA 152
             S  +     EE WK    +  KW+D R  K+  K PDFKHK+TGEALW+  N +P W 
Sbjct: 286 PKSRGVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL--NESPTWV 343

Query: 151 THKL 140
             KL
Sbjct: 344 LPKL 347



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
 Frame = -2

Query: 295 EHWKAFFADRSKWFDYRKTKKTD----KHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQ 128
           + W     +  +W+D+R+ K       +HPDFK+KDT  +LW+  N+ P W   KL  L+
Sbjct: 223 DSWNHLIENPKEWWDHRENKANGLVKPRHPDFKNKDTSVSLWL--NKAPDWVLPKLEGLE 280

Query: 127 DEAFATSPPK---------DDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
              F    PK         ++ WK L  +P KW DNR  K+N K PDFKHK
Sbjct: 281 ---FDVLVPKSRGVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHK 328


>ref|XP_004513105.1| PREDICTED: protein OSB2, chloroplastic-like [Cicer arietinum]
          Length = 377

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
 Frame = -2

Query: 472 DPSVWFDERKTKKSKKHPDFVHK-------ETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           +PS W D + TK+S +   F  K       E ++++   +K+ P                
Sbjct: 192 NPSEWRDVQSTKESAESTAFERKPNGEIQSEVKQSMTGGEKKYP---------------- 235

Query: 313 TSPSIEEHWKAFFADRSKWFDYRKTKKTD----KHPDFKHKDTGEALWIDDNRTPIWATH 146
              S+   W     D  +W+DYR +K+ +    ++PDFK KD    +WID  R P W   
Sbjct: 236 --DSLSSSWSNLLGDPKQWWDYRDSKRKELVSPRYPDFKRKDGSAPIWID--RAPKWVLS 291

Query: 145 KLNNLQDEAFATSPPK------DDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
           +L  L+ +     P +      D  W  L  +P+KW DNR  KKN + PDFKHK
Sbjct: 292 RLQELEFDIPVVKPKQAKDGNGDQSWNDLVQNPAKWWDNRLNKKNERGPDFKHK 345



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
 Frame = -2

Query: 484 SLFADPSVWFDERKTKK----SKKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAF 317
           +L  DP  W+D R +K+    S ++PDF  K+    +WID  R P WV   LS LQ+  F
Sbjct: 244 NLLGDPKQWWDYRDSKRKELVSPRYPDFKRKDGSAPIWID--RAPKWV---LSRLQELEF 298

Query: 316 ---------ATSPSIEEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRT 164
                    A   + ++ W     + +KW+D R  KK ++ PDFKHK+TGE LW+ D  +
Sbjct: 299 DIPVVKPKQAKDGNGDQSWNDLVQNPAKWWDNRLNKKNERGPDFKHKETGEGLWLKD--S 356

Query: 163 PIWATHKLNNLQDEAFATS 107
           P W   KL  LQ +    S
Sbjct: 357 PSWVLPKLPPLQPKQIEVS 375


>ref|XP_006398112.1| hypothetical protein EUTSA_v10000889mg [Eutrema salsugineum]
           gi|557099201|gb|ESQ39565.1| hypothetical protein
           EUTSA_v10000889mg [Eutrema salsugineum]
          Length = 437

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 59/169 (34%), Positives = 74/169 (43%), Gaps = 9/169 (5%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P  W D R  K S     +HPDF  KE   +LW+D    P WV   L+ L+   F 
Sbjct: 210 LLENPKEWVDHRGNKASGLVKPRHPDFKGKEGDLSLWLDSA--PDWVLQKLNRLKFDVFV 267

Query: 313 TSPSI-----EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWAT 149
               +     EE WK    +  KW D R TK   K PDFKH++TGEALW+ D  +P W  
Sbjct: 268 PKGKLKQLKGEESWKDLVENPDKWLDSRSTKTNVKAPDFKHRETGEALWMTD--SPTWVL 325

Query: 148 HKLNNLQDEAFATSPPKDDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
            KL           P K    +    + +          N K PDFKHK
Sbjct: 326 SKL----------PPLKKTQERPQIVNTT----------NVKAPDFKHK 354



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
 Frame = -2

Query: 289 WKAFFADRSKWFDYRKTKKTD----KHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQDE 122
           WK    +  +W D+R  K +     +HPDFK K+   +LW+D    P W   KLN L+ +
Sbjct: 207 WKHLLENPKEWVDHRGNKASGLVKPRHPDFKGKEGDLSLWLDS--APDWVLQKLNRLKFD 264

Query: 121 AFATSPPKDDL-----WKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
            F        L     WK L  +P KW+D+R  K N K PDFKH+
Sbjct: 265 VFVPKGKLKQLKGEESWKDLVENPDKWLDSRSTKTNVKAPDFKHR 309


>ref|XP_006282647.1| hypothetical protein CARUB_v10004988mg, partial [Capsella rubella]
           gi|482551352|gb|EOA15545.1| hypothetical protein
           CARUB_v10004988mg, partial [Capsella rubella]
          Length = 394

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P  W+D R+ K +     +HPDF  K++  +LW++  + P WV P L  L+     
Sbjct: 263 LIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLN--KAPNWVLPKLEGLEFDVLV 320

Query: 313 TSPSI------EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWA 152
               I      EE WK    +  KW+D R  K+  K PDFKHK+TGEALW+  N +P W 
Sbjct: 321 PKARIVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL--NESPTWL 378

Query: 151 THKL 140
             KL
Sbjct: 379 LPKL 382



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
 Frame = -2

Query: 295 EHWKAFFADRSKWFDYRKTKKTD----KHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQ 128
           + W     +  +W+D+R+ K       +HPDFK KD+  +LW+  N+ P W   KL  L+
Sbjct: 258 DSWNRLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWL--NKAPNWVLPKLEGLE 315

Query: 127 DEAFATSPPK---------DDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
              F    PK         ++ WK L  +P KW DNR  K+N K PDFKHK
Sbjct: 316 ---FDVLVPKARIVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHK 363


>ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
           gi|332658861|gb|AEE84261.1| plastid transcriptionally
           active 9 [Arabidopsis thaliana]
          Length = 371

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P  W+D R+ K +     +HPDF  K++  +LW++  + P WV P L  L+     
Sbjct: 240 LIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLN--KAPNWVLPKLEGLEFDVLV 297

Query: 313 TSPSI------EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWA 152
               +      EE WK    +  KW+D R  K+  K PDFKHK+TGEALW+  N +P W 
Sbjct: 298 PKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL--NESPTWV 355

Query: 151 THKL 140
             KL
Sbjct: 356 LPKL 359



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
 Frame = -2

Query: 295 EHWKAFFADRSKWFDYRKTKKTD----KHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQ 128
           + W     +  +W+D+R+ K       +HPDFK KD+  +LW+  N+ P W   KL  L+
Sbjct: 235 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWL--NKAPNWVLPKLEGLE 292

Query: 127 DEAFATSPPK---------DDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
              F    PK         ++ WK L  +P KW DNR  K+N K PDFKHK
Sbjct: 293 ---FDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHK 340


>dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
          Length = 371

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P  W+D R+ K +     +HPDF  K++  +LW++  + P WV P L  L+     
Sbjct: 240 LIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLN--KAPNWVLPKLEGLEFDVLV 297

Query: 313 TSPSI------EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTPIWA 152
               +      EE WK    +  KW+D R  K+  K PDFKHK+TGEALW+  N +P W 
Sbjct: 298 PKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL--NESPTWV 355

Query: 151 THKL 140
             KL
Sbjct: 356 LPKL 359



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
 Frame = -2

Query: 295 EHWKAFFADRSKWFDYRKTKKTD----KHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQ 128
           + W     +  +W+D+R+ K       +HPDFK KD+  +LW+  N+ P W   KL  L+
Sbjct: 235 DSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWL--NKAPNWVLPKLEGLE 292

Query: 127 DEAFATSPPK---------DDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
              F    PK         ++ WK L  +P KW DNR  K+N K PDFKHK
Sbjct: 293 ---FDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHK 340


>ref|XP_002330744.1| predicted protein [Populus trichocarpa]
          Length = 354

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
 Frame = -2

Query: 481 LFADPSVWFDERKTKKS----KKHPDFVHKETRKALWIDDKRIPAWVNPMLSNLQDTAFA 314
           L  +P+ W+D R +K+S     KHPDF HK   +++W+     P+W+    S L+   F 
Sbjct: 211 LLENPNQWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTGA--PSWI---FSGLEKVKFD 265

Query: 313 TSPSI---------EEHWKAFFADRSKWFDYRKTKKTDKHPDFKHKDTGEALWIDDNRTP 161
              ++         EE WK    +  KW+D R  KK  K PDFKHK+TGE LW+D   +P
Sbjct: 266 VKTALPTQTKQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLD--TSP 323

Query: 160 IWATHKL 140
            W   KL
Sbjct: 324 AWVLPKL 330



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
 Frame = -2

Query: 289 WKAFFADRSKWFDYRKTKKTD----KHPDFKHKDTGEALWIDDNRTPIWATHKLNNLQDE 122
           W     + ++W+DYR +K++     KHPDFKHK+  +++W+     P W    L  ++ +
Sbjct: 208 WTDLLENPNQWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTG--APSWIFSGLEKVKFD 265

Query: 121 AFATSPPK------DDLWKSLFADPSKWVDNRKFKKNNKHPDFKHK 2
                P +      ++ WK L  +P KW DNR  KKN K PDFKHK
Sbjct: 266 VKTALPTQTKQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHK 311