BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025844
         (775 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi...   171   3e-40
gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlise...   169   1e-39
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi...   165   1e-38
emb|CBI32614.3| unnamed protein product [Vitis vinifera]              163   7e-38
ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [A...   162   1e-37
ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containi...   161   2e-37
gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily p...   160   6e-37
ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Popu...   158   2e-36
gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]     157   3e-36
gb|ABA95579.1| pentatricopeptide, putative, expressed [Oryza sat...   157   4e-36
ref|NP_001065238.1| Os12g0102600 [Oryza sativa Japonica Group] g...   157   4e-36
ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group] g...   157   5e-36
gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indi...   157   5e-36
ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutr...   156   8e-36
ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi...   156   8e-36
ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Caps...   155   2e-35
ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thalian...   154   2e-35
dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]           154   2e-35
ref|XP_002525184.1| pentatricopeptide repeat-containing protein,...   153   6e-35
ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containi...   153   7e-35

>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Vitis vinifera]
          Length = 749

 Score =  171 bits (433), Expect = 3e-40
 Identities = 86/199 (43%), Positives = 126/199 (63%), Gaps = 3/199 (1%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT A+NA+ N CA +GD ++   V +EM     +PD  TYN++IKL AR++R+DL+  V
Sbjct: 230 PDTAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLVFV 289

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E +L + I+ CM+T +SLVAAYVG  DL+ AE+LV AM+EG+ D+C++LR    + P N
Sbjct: 290 LERILDKGIQLCMTTLHSLVAAYVGFGDLETAEKLVQAMREGRQDLCKILRDVNSENPGN 349

Query: 544 CEE---NEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTLRAMQQ 714
            E    ++                P+ Y PD+RIY  LMKGY+++ R+ D +  L AM+ 
Sbjct: 350 NEGYIFDKLLPNSVERNNSEPPLLPKAYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRH 409

Query: 715 SKDPDVRPDHITYTTAISA 771
             D   +PDH+TYTT +SA
Sbjct: 410 QDDSTSQPDHVTYTTVVSA 428


>gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlisea aurea]
          Length = 675

 Score =  169 bits (428), Expect = 1e-39
 Identities = 86/204 (42%), Positives = 123/204 (60%), Gaps = 7/204 (3%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT A+NA  N CA++GD  K   +  EM  FD +PDA TYN++IKL AR+ R+DL+  V
Sbjct: 154 PDTGAYNAALNACAVLGDSNKFLKLFDEMPEFDCEPDALTYNVMIKLCARVGRKDLLVFV 213

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E ++  + + C++T +SLVAAYVG  DL+ AE+LV AM+EG+TD+C++LR        +
Sbjct: 214 LERIIQTQTDFCITTLHSLVAAYVGFNDLETAEKLVQAMREGRTDLCKLLRDSSISDAED 273

Query: 544 CEENE-------XXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTLR 702
            E++                        PR + PD+RIY  LMKGY++  R+ D +  L 
Sbjct: 274 EEQDHSHVFKKLLPNATTANEIEDPPQLPRPFSPDSRIYTTLMKGYMKAGRVADTVRMLT 333

Query: 703 AMQQSKDPDVRPDHITYTTAISAF 774
           AM+  +D    PDH+ YTT ISAF
Sbjct: 334 AMRYEEDESSHPDHVAYTTVISAF 357


>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
           gi|449483612|ref|XP_004156638.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
          Length = 736

 Score =  165 bits (418), Expect = 1e-38
 Identities = 87/205 (42%), Positives = 122/205 (59%), Gaps = 9/205 (4%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT A+N + N CA +G  EK   + +EM+ F  +PD  TYN++IKL AR  R+DLI  V
Sbjct: 217 PDTAAYNGVLNACANMGAYEKFLQLFEEMEEFGAEPDVLTYNVMIKLCARANRKDLIVYV 276

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +EA+L + I  CM+T +S+VAAYVG  DL+ AE++V AM+EGK DICR+LR    D   +
Sbjct: 277 LEAILAKDIPMCMTTLHSVVAAYVGFGDLETAEKVVQAMREGKRDICRILRDGYLDEIED 336

Query: 544 CEE---------NEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWT 696
            E+          +                P++Y P++RIY  LMKGY+ + R+ D I  
Sbjct: 337 VEDLNEDEDELFKKLLPNLNEEIDSEPPLLPKIYSPNSRIYTTLMKGYMNEGRVGDTIRM 396

Query: 697 LRAMQQSKDPDVRPDHITYTTAISA 771
           L AM+   D    PDH++YTT +SA
Sbjct: 397 LEAMRNQGDRSSHPDHVSYTTVVSA 421


>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  163 bits (412), Expect = 7e-38
 Identities = 83/196 (42%), Positives = 120/196 (61%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT A+NA+ N CA +GD ++   V +EM     +PD  TYN++IKL AR++R+DL+  V
Sbjct: 238 PDTAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLVFV 297

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E +L + I+ CM+T +SLVAAYVG  DL+ AE+LV AM+EG+ D+C++LR    + P  
Sbjct: 298 LERILDKGIQLCMTTLHSLVAAYVGFGDLETAEKLVQAMREGRQDLCKILRDVNSENP-- 355

Query: 544 CEENEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTLRAMQQSKD 723
                                   Y PD+RIY  LMKGY+++ R+ D +  L AM+   D
Sbjct: 356 -----------------------AYAPDSRIYTTLMKGYMKEGRVTDTVRMLEAMRHQDD 392

Query: 724 PDVRPDHITYTTAISA 771
              +PDH+TYTT +SA
Sbjct: 393 STSQPDHVTYTTVVSA 408


>ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [Amborella trichopoda]
           gi|548845504|gb|ERN04895.1| hypothetical protein
           AMTR_s00080p00039920 [Amborella trichopoda]
          Length = 718

 Score =  162 bits (410), Expect = 1e-37
 Identities = 89/204 (43%), Positives = 123/204 (60%), Gaps = 7/204 (3%)
 Frame = +1

Query: 181 WPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPG 360
           +PD  AFNA+ N CA  GD      +   M  F++ PDA TYNI+IK  ARIER++L+  
Sbjct: 203 YPDVAAFNAVLNACANAGDAVNFVEIFSRMPKFELIPDALTYNIMIKFFARIERKELLVA 262

Query: 361 VVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGK------ 522
           V+E ML  K+ PC ++F+SLVAAYVGL DL+MAE LV AM EG+ D+C +LR +      
Sbjct: 263 VLEKMLAMKVAPCATSFHSLVAAYVGLGDLEMAEILVRAMSEGRQDVCALLRERSPRTTA 322

Query: 523 -KFDVPRNCEENEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTL 699
            +FD   +  E+                 P+ Y PD+RIY  LMKGY+ + RL DV+  L
Sbjct: 323 MEFDEISSMIES-LGLDISHDSSSAPLLLPKSYHPDSRIYTTLMKGYMHQGRLNDVMDLL 381

Query: 700 RAMQQSKDPDVRPDHITYTTAISA 771
             M++ +D   +PD +TYTT ++A
Sbjct: 382 ETMEKQRDSS-QPDEVTYTTVVTA 404


>ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Solanum tuberosum]
          Length = 738

 Score =  161 bits (408), Expect = 2e-37
 Identities = 86/200 (43%), Positives = 125/200 (62%), Gaps = 3/200 (1%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT A+NA+ N CA +GD  +   +  EM  FD +PD  +YN++IKL AR +R+DL+  V
Sbjct: 221 PDTAAYNAVLNACANLGDKNRFLELFNEMSEFDCEPDVLSYNVMIKLCARGDRKDLLVFV 280

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLR-GKKFDVPR 540
           +E +L + I  CMSTF SLVAAYVG  DL  AE++V AM+EG+ D+C++LR G   +V  
Sbjct: 281 LERILEKGIPLCMSTFQSLVAAYVGFGDLVTAEKVVQAMREGRRDLCKMLREGNVEEVCL 340

Query: 541 NCEE--NEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTLRAMQQ 714
           N  +  ++                 R+++P++R+Y  LMKGY+   R+ D++  L AM+ 
Sbjct: 341 NDSDVFDKLLPNSVNWRDNEPPELSRVFEPNSRMYTTLMKGYMNAGRVTDMVRMLEAMRH 400

Query: 715 SKDPDVRPDHITYTTAISAF 774
             D +  PDH+TYTT ISAF
Sbjct: 401 LGDSESHPDHVTYTTVISAF 420


>gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 758

 Score =  160 bits (404), Expect = 6e-37
 Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 23/220 (10%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT A+NA+ N CA +GD  K   + +EM  +  +PD  TYN++IKL AR +R+DL+  V
Sbjct: 224 PDTAAYNAVLNACANLGDKSKFLKLFEEMSEWGCEPDVLTYNVMIKLLARADRKDLLVFV 283

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E ++ ++I  CM+T +SLVAAYVG  DL+ AER+V AM+E + D+C++LR    +    
Sbjct: 284 LERIVEKRIRLCMTTLHSLVAAYVGFDDLETAERIVQAMREQRNDLCKILRDANLEDLNQ 343

Query: 544 CEEN-----------------------EXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMK 654
            EE+                       E                P++Y P++RIY  LMK
Sbjct: 344 AEEDEEEEEEEENRKDLSQNEKDDIVFEKLLPNSIKPSSEARLLPKVYAPNSRIYTTLMK 403

Query: 655 GYVQKRRLKDVIWTLRAMQQSKDPDVRPDHITYTTAISAF 774
           GY++  R+ D +  L AM+   D    PDH+TYTT +SAF
Sbjct: 404 GYMKAGRVSDTVRMLEAMRHQGDKASHPDHVTYTTVVSAF 443


>ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Populus trichocarpa]
           gi|550321129|gb|EEF04616.2| hypothetical protein
           POPTR_0016s08650g [Populus trichocarpa]
          Length = 724

 Score =  158 bits (399), Expect = 2e-36
 Identities = 86/210 (40%), Positives = 122/210 (58%), Gaps = 14/210 (6%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT AFN + N CA +GD +    + +EM  F ++PD  TYNI+IKL AR  R+DL+  V
Sbjct: 198 PDTAAFNNVLNACANLGDGKMFLKLFEEMPDFGLEPDILTYNIMIKLCARCNRKDLLVFV 257

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E ++ + I  CM+T +SLVAAYVG  DL+  ER+V AM+EG+ D+C++LR    +    
Sbjct: 258 LERVIEKGIPLCMTTLHSLVAAYVGFGDLETVERMVQAMREGRRDLCKILREANLEDFNE 317

Query: 544 CEENE--------------XXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLK 681
            EENE                              P+++ PD+RI+  LMKGY+++ R+ 
Sbjct: 318 DEENEVLDSSQIGVSVFEKLLPNLVEVSNSEPPLLPKVFAPDSRIFTTLMKGYMKQGRVT 377

Query: 682 DVIWTLRAMQQSKDPDVRPDHITYTTAISA 771
           D +  L AM+   D   +PDHITYTT ISA
Sbjct: 378 DTVRMLEAMRCQDDSKGQPDHITYTTVISA 407


>gb|EXC16278.1| hypothetical protein L484_024452 [Morus notabilis]
          Length = 749

 Score =  157 bits (398), Expect = 3e-36
 Identities = 83/201 (41%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT AFNA+ N CA  GD      +  EM  +   PD  +YN++IKL  R  R+DL+  V
Sbjct: 223 PDTGAFNAVLNACANCGDTRMFLKLFDEMPEWGCGPDVLSYNVMIKLCTRAGRKDLLVFV 282

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E +L E+I  CM+T +SLVAAYVG  DL+ AER+V AM+E + D+C +LRG   +    
Sbjct: 283 LERILEEEIPFCMTTMHSLVAAYVGFGDLETAERMVQAMREERRDLCEILRGSNVEDSNR 342

Query: 544 CEENEXXXXXXXXXXXXXXXXPRM----YKPDTRIYNILMKGYVQKRRLKDVIWTLRAMQ 711
            E++                 P++    Y PD+RIY  LMKGY++  R+ D +  L AM+
Sbjct: 343 NEQDVFERLLPNLVKASDSEQPQLLPKAYAPDSRIYTTLMKGYMKAGRVTDTVRMLEAMR 402

Query: 712 QSKDPDVRPDHITYTTAISAF 774
             +D    PDH++YTT +SAF
Sbjct: 403 HQEDSASHPDHVSYTTVVSAF 423


>gb|ABA95579.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 697

 Score =  157 bits (397), Expect = 4e-36
 Identities = 84/204 (41%), Positives = 120/204 (58%), Gaps = 4/204 (1%)
 Frame = +1

Query: 169 RNNVWPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRD 348
           + N  PDT AFNA  + CA  GD  +   +  +M A++  PDA TYN+LIK+ AR  R+D
Sbjct: 196 KTNSLPDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKD 255

Query: 349 LIPGVVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKF 528
           L+  V+  +L   + PC +TF+SLVAAYVG  D+  AER+V AM+E +TDIC + R    
Sbjct: 256 LVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVAD 315

Query: 529 D--VPRNCEENEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTLR 702
           D  +  + +                   P+ Y P++R+Y  LMKGY+   R++DV+  LR
Sbjct: 316 DHIISHDQQSCVLEDIVKPWEQEEVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLR 375

Query: 703 AMQQSKD--PDVRPDHITYTTAIS 768
           AM++  +  P  RPDH+TYTT IS
Sbjct: 376 AMRREGETSPASRPDHVTYTTVIS 399


>ref|NP_001065238.1| Os12g0102600 [Oryza sativa Japonica Group]
           gi|113648426|dbj|BAF28938.1| Os12g0102600, partial
           [Oryza sativa Japonica Group]
          Length = 712

 Score =  157 bits (397), Expect = 4e-36
 Identities = 84/204 (41%), Positives = 120/204 (58%), Gaps = 4/204 (1%)
 Frame = +1

Query: 169 RNNVWPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRD 348
           + N  PDT AFNA  + CA  GD  +   +  +M A++  PDA TYN+LIK+ AR  R+D
Sbjct: 211 KTNSLPDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKD 270

Query: 349 LIPGVVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKF 528
           L+  V+  +L   + PC +TF+SLVAAYVG  D+  AER+V AM+E +TDIC + R    
Sbjct: 271 LVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVAD 330

Query: 529 D--VPRNCEENEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTLR 702
           D  +  + +                   P+ Y P++R+Y  LMKGY+   R++DV+  LR
Sbjct: 331 DHIISHDQQSCVLEDIVKPWEQEEVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLR 390

Query: 703 AMQQSKD--PDVRPDHITYTTAIS 768
           AM++  +  P  RPDH+TYTT IS
Sbjct: 391 AMRREGETSPASRPDHVTYTTVIS 414


>ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
           gi|77548314|gb|ABA91111.1| pentatricopeptide, putative
           [Oryza sativa Japonica Group]
           gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa
           Japonica Group]
          Length = 543

 Score =  157 bits (396), Expect = 5e-36
 Identities = 84/204 (41%), Positives = 120/204 (58%), Gaps = 4/204 (1%)
 Frame = +1

Query: 169 RNNVWPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRD 348
           + N  PDT AFNA  + CA  GD  +   +  +M A++  PDA TYN+LIK+ AR  R+D
Sbjct: 42  KTNSLPDTAAFNAALSACADAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKD 101

Query: 349 LIPGVVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKF 528
           L+  V+  +L   + PC +TF+SLVAAYVG  D+  AER+V AM+E +TDIC + R    
Sbjct: 102 LVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVAD 161

Query: 529 D--VPRNCEENEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTLR 702
           D  +  + +                   P+ Y P++R+Y  LMKGY+   R++DV+  LR
Sbjct: 162 DHIISHDQQSCVLEDIVKPWEQDEVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLR 221

Query: 703 AMQQSKD--PDVRPDHITYTTAIS 768
           AM++  +  P  RPDH+TYTT IS
Sbjct: 222 AMRREGETSPASRPDHVTYTTVIS 245


>gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indica Group]
          Length = 697

 Score =  157 bits (396), Expect = 5e-36
 Identities = 84/204 (41%), Positives = 120/204 (58%), Gaps = 4/204 (1%)
 Frame = +1

Query: 169 RNNVWPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRD 348
           + N  PDT AFNA  + CA  GD  +   +  +M A++  PDA TYN+LIK+ AR  R+D
Sbjct: 196 KTNSLPDTAAFNAALSACADAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKD 255

Query: 349 LIPGVVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKF 528
           L+  V+  +L   + PC +TF+SLVAAYVG  D+  AER+V AM+E +TDIC + R    
Sbjct: 256 LVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMRERRTDICLLFRAVAD 315

Query: 529 D--VPRNCEENEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTLR 702
           D  +  + +                   P+ Y P++R+Y  LMKGY+   R++DV+  LR
Sbjct: 316 DHIISHDQQSCVLEDIVKPWEQDEVPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLR 375

Query: 703 AMQQSKD--PDVRPDHITYTTAIS 768
           AM++  +  P  RPDH+TYTT IS
Sbjct: 376 AMRREGETSPASRPDHVTYTTVIS 399


>ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutrema salsugineum]
           gi|557108800|gb|ESQ49107.1| hypothetical protein
           EUTSA_v10020113mg [Eutrema salsugineum]
          Length = 777

 Score =  156 bits (394), Expect = 8e-36
 Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 32/229 (13%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT AFNA+ N CA +GD EK + +  EM  +D + D  TYN++IKL AR+ R++LI  V
Sbjct: 233 PDTAAFNAVLNACANLGDAEKFSKLFDEMSEWDCESDVLTYNVMIKLCARVNRKELIVFV 292

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E ++ + I+ CM+T +SLVAAYVG  DL+ AER+V AM+E + D+C+VLR    +  + 
Sbjct: 293 LERIVEKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNIEDLKE 352

Query: 544 CEENE--------------------------------XXXXXXXXXXXXXXXXPRMYKPD 627
            EE E                                                PR++ PD
Sbjct: 353 KEEEEAEDDEDAFEDGEDSGYSPRDEVNEEVFEDVFKKLLPNSVTPSDKPPLLPRVFAPD 412

Query: 628 TRIYNILMKGYVQKRRLKDVIWTLRAMQQSKDPDVRPDHITYTTAISAF 774
           +RIY  LMKGY++  R+ D    L AM++  D    PD +TYTT +SAF
Sbjct: 413 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDSKSHPDEVTYTTVVSAF 461


>ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
           gi|297328472|gb|EFH58891.1| HCF152 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 772

 Score =  156 bits (394), Expect = 8e-36
 Identities = 87/230 (37%), Positives = 125/230 (54%), Gaps = 33/230 (14%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT AFNA+ N CA +GD EK   +  EM  +D +PD  TYN++IKL AR++R++LI  V
Sbjct: 227 PDTAAFNAVLNACANLGDTEKYWKLFDEMSEWDCEPDVLTYNVMIKLCARVDRKELIVYV 286

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E ++ + I+ CM+T +SLVAAYVG  DL+ AER+V AM+E + D+C+VLR    +  + 
Sbjct: 287 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 346

Query: 544 CEENE---------------------------------XXXXXXXXXXXXXXXXPRMYKP 624
            EE E                                                 P+++ P
Sbjct: 347 KEEEEAAEDDEDAFEDDEDSGYSARDEVSEEGFEDVFKKLLPNSVDPSGDPPLLPKVFAP 406

Query: 625 DTRIYNILMKGYVQKRRLKDVIWTLRAMQQSKDPDVRPDHITYTTAISAF 774
           D+RIY  LMKGY++  R+ D    L AM++  D +  PD +TYTT +SAF
Sbjct: 407 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAF 456


>ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Capsella rubella]
           gi|482565467|gb|EOA29656.1| hypothetical protein
           CARUB_v10015405mg [Capsella rubella]
          Length = 781

 Score =  155 bits (391), Expect = 2e-35
 Identities = 87/230 (37%), Positives = 125/230 (54%), Gaps = 33/230 (14%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT AFNA+ N CA +GD EK   +  EM  +D +PD  TYN++IKL AR++R++LI  V
Sbjct: 236 PDTAAFNAVLNACANLGDTEKYWKLFYEMAEWDCEPDVLTYNVMIKLCARVDRKELIVFV 295

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E ++ + I+ CM+T +SLVAAYVG  DL+ AER+V AM+E + D+C+VLR    +  + 
Sbjct: 296 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 355

Query: 544 CEENE---------------------------------XXXXXXXXXXXXXXXXPRMYKP 624
            EE E                                                 P+++ P
Sbjct: 356 KEEEEAEDDEDAFEDDEDSGFSAGDGVSSEEGFEDVFKKLLPNSVDPSSDPPLLPKVFVP 415

Query: 625 DTRIYNILMKGYVQKRRLKDVIWTLRAMQQSKDPDVRPDHITYTTAISAF 774
           D+RIY  LMKGY++  R+ D    L AM++  D +  PD +TYTT +SAF
Sbjct: 416 DSRIYTTLMKGYMKSGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAF 465


>ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thaliana]
           gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g09650, chloroplastic; AltName: Full=Protein HIGH
           CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
           gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical
           protein [Arabidopsis thaliana]
           gi|332641272|gb|AEE74793.1| RNA binding protein HCF152
           [Arabidopsis thaliana]
          Length = 778

 Score =  154 bits (390), Expect = 2e-35
 Identities = 86/229 (37%), Positives = 125/229 (54%), Gaps = 32/229 (13%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT AFNA+ N CA +GD +K   + +EM  +D +PD  TYN++IKL AR+ R++LI  V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E ++ + I+ CM+T +SLVAAYVG  DL+ AER+V AM+E + D+C+VLR    +  + 
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353

Query: 544 CEENE--------------------------------XXXXXXXXXXXXXXXXPRMYKPD 627
            EE E                                                P+++ PD
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPD 413

Query: 628 TRIYNILMKGYVQKRRLKDVIWTLRAMQQSKDPDVRPDHITYTTAISAF 774
           +RIY  LMKGY++  R+ D    L AM++  D +  PD +TYTT +SAF
Sbjct: 414 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAF 462


>dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
          Length = 778

 Score =  154 bits (390), Expect = 2e-35
 Identities = 86/229 (37%), Positives = 125/229 (54%), Gaps = 32/229 (13%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT AFNA+ N CA +GD +K   + +EM  +D +PD  TYN++IKL AR+ R++LI  V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E ++ + I+ CM+T +SLVAAYVG  DL+ AER+V AM+E + D+C+VLR    +  + 
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353

Query: 544 CEENE--------------------------------XXXXXXXXXXXXXXXXPRMYKPD 627
            EE E                                                P+++ PD
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPD 413

Query: 628 TRIYNILMKGYVQKRRLKDVIWTLRAMQQSKDPDVRPDHITYTTAISAF 774
           +RIY  LMKGY++  R+ D    L AM++  D +  PD +TYTT +SAF
Sbjct: 414 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAF 462


>ref|XP_002525184.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535481|gb|EEF37150.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 740

 Score =  153 bits (387), Expect = 6e-35
 Identities = 83/215 (38%), Positives = 120/215 (55%), Gaps = 19/215 (8%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT AFN++ N CA +GD +    +  +M  F  +PD  TYN++IKL AR +R+DL+  V
Sbjct: 210 PDTAAFNSVLNACANLGDGKMFLQLFDQMSEFGAEPDILTYNVMIKLCARCDRKDLLVFV 269

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKF----- 528
           +E ++ ++I  CM+T +SLVAAYVG  DL+ AE +  AM+EG+ D+C++LR         
Sbjct: 270 LERVIQKRIPLCMTTLHSLVAAYVGFGDLETAEIMAQAMREGRRDLCKILREVNMEDLGY 329

Query: 529 ---DVPRNCEE-----------NEXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQ 666
              DV  N +             +                P++Y PD+RIY  LMKGY+ 
Sbjct: 330 YGEDVIENSQRLDQNRKNMFVFEKLLPNSIQSGDTEPSLLPKVYAPDSRIYTTLMKGYMN 389

Query: 667 KRRLKDVIWTLRAMQQSKDPDVRPDHITYTTAISA 771
           + R+ D I  L AM+   D    PDH++YTT ISA
Sbjct: 390 QGRVSDTIRMLEAMRHQDDNASHPDHVSYTTVISA 424


>ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 743

 Score =  153 bits (386), Expect = 7e-35
 Identities = 82/205 (40%), Positives = 117/205 (57%), Gaps = 8/205 (3%)
 Frame = +1

Query: 184 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 363
           PDT AFNA  N CA +GD ++   +  EM     +PD  TYN++IKL AR+ R+DL+  V
Sbjct: 227 PDTAAFNAALNACANLGDSDRFLKLFDEMPESGAEPDVLTYNVMIKLCARVGRKDLLVFV 286

Query: 364 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKMAERLVHAMQEGKTDICRVLRGKKFDVPRN 543
           +E +L + I  CM+T  SLVAAYVG  DL+ AE++V AM+EG+ D+C++LR       RN
Sbjct: 287 LERILDQGITVCMTTLNSLVAAYVGFGDLETAEKMVQAMREGRRDLCKILREANL---RN 343

Query: 544 CEEN--------EXXXXXXXXXXXXXXXXPRMYKPDTRIYNILMKGYVQKRRLKDVIWTL 699
              +        +                P+ Y  ++RIY  LMKGY+   R+ D +  L
Sbjct: 344 SNSSGRDGNVFEKLLPNSVTASECEPPLLPKAYTANSRIYTTLMKGYMNAGRVIDTVRML 403

Query: 700 RAMQQSKDPDVRPDHITYTTAISAF 774
            A++   D   +PDH+TYTT +SAF
Sbjct: 404 EALRHQDDSSSQPDHVTYTTVVSAF 428