BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025758
         (502 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16549.1| unknown [Picea sitchensis]                              82   1e-13
gb|ABK25569.1| unknown [Picea sitchensis]                              80   4e-13
gb|ABK24422.1| unknown [Picea sitchensis]                              77   3e-12
ref|XP_004173996.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_004140363.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_002532468.1| pentatricopeptide repeat-containing protein,...    64   2e-08
ref|XP_006383312.1| hypothetical protein POPTR_0005s14380g, part...    64   3e-08
ref|XP_002301697.1| predicted protein [Populus trichocarpa]            64   3e-08
gb|ESW35390.1| hypothetical protein PHAVU_001G231300g [Phaseolus...    63   5e-08
ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
emb|CBI33534.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_006482140.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_004503139.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
gb|EOY03976.1| Tetratricopeptide repeat-like superfamily protein...    61   2e-07
ref|XP_006430632.1| hypothetical protein CICLE_v10011615mg [Citr...    59   5e-07
ref|XP_003580152.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
gb|EMJ16546.1| hypothetical protein PRUPE_ppa005397mg [Prunus pe...    56   6e-06
ref|XP_006591332.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_003548696.2| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>gb|ABR16549.1| unknown [Picea sitchensis]
          Length = 524

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = +3

Query: 237 SQNTPESPAECL-AEIVKNPPRTGLIGALDDAYKLYESEFTSEIVEEVLKLSYGKGKEAL 413
           SQ  P  P E + + I+K PPR G+  AL++       E + + VE+VLKLSYG G EA+
Sbjct: 67  SQYPPTMPIEMIVSNILKKPPRMGVENALNEL----GLEVSIQFVEDVLKLSYGAGMEAM 122

Query: 414 KFFKWAETKLSGKHTQVAWNQIVDVLGK 497
           KFF+W+  KLS KH+ +AWN +VD+LGK
Sbjct: 123 KFFRWSGLKLSRKHSPLAWNLLVDLLGK 150


>gb|ABK25569.1| unknown [Picea sitchensis]
          Length = 541

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +3

Query: 237 SQNTPESPAECL-AEIVKNPPRTGLIGALDDAYKLYESEFTSEIVEEVLKLSYGKGKEAL 413
           SQ  P  P E + + I+K PPR G+  AL++       +F    VE+VLKLSYG G EA+
Sbjct: 88  SQYPPTMPIEMIVSNILKKPPRMGVENALNELRLGVSIQF----VEDVLKLSYGAGMEAV 143

Query: 414 KFFKWAETKLSGKHTQVAWNQIVDVLGK 497
           KFF+WA  KL+ KH+ +AWN +VD+LGK
Sbjct: 144 KFFRWAGLKLTRKHSPLAWNLLVDLLGK 171


>gb|ABK24422.1| unknown [Picea sitchensis]
          Length = 504

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
 Frame = +3

Query: 192 PTEYQQKAHKNPPTI--------SQNTPESPAECL-AEIVKNPPRTGLIGALDDAYKLYE 344
           P + QQ     PP I        SQ  P +P E + + I+K PP+ G+   L+       
Sbjct: 20  PVQLQQPLQ--PPRILKGPGLDPSQYPPTTPIEVIVSNILKKPPQMGIENTLNGLGLGVS 77

Query: 345 SEFTSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIVDVLG 494
            +F    VE+VLKLSYG G EA+KFF+WA  KLS KH+ +AWN +VD+LG
Sbjct: 78  IKF----VEDVLKLSYGAGMEAMKFFRWAGLKLSSKHSPLAWNLLVDLLG 123


>ref|XP_004173996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like, partial [Cucumis sativus]
          Length = 391

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 50/147 (34%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
 Frame = +3

Query: 78  NHYHSNSDKKHRETSRKHRERSP-DREIAERSTKFPKKSPTEYQQKAHKN--PPTISQ-N 245
           +H H  S K    +S      SP         T F   SP       HKN  P  +S  +
Sbjct: 11  DHTHQRSKKHLPSSSPSSATPSPIPSNSLSHQTHFHNPSP----HPPHKNSTPHFLSYLD 66

Query: 246 TPESPAEC--LAEIVKNPPRTGLIGALDDAYKLYESEFTSEIVEEVLKLSYGKGKEALKF 419
            P  P +   + EI+ N P   +  AL+D         T + VEEVLKLSY     ++KF
Sbjct: 67  FPNLPFQIKLMCEIIANSPSLDVEKALEDT----GIHATQQDVEEVLKLSYRFPGSSVKF 122

Query: 420 FKWAETKLSGKHTQVAWNQIVDVLGKS 500
           F+W+  KL+ +H+  AWN I+D+LGK+
Sbjct: 123 FRWSGRKLNDQHSPYAWNLIIDMLGKN 149


>ref|XP_004140363.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 50/147 (34%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
 Frame = +3

Query: 78  NHYHSNSDKKHRETSRKHRERSP-DREIAERSTKFPKKSPTEYQQKAHKN--PPTISQ-N 245
           +H H  S K    +S      SP         T F   SP       HKN  P  +S  +
Sbjct: 11  DHTHQRSKKHLPSSSPSSATPSPIPSNSLSHQTHFHNPSP----HPPHKNSTPHFLSYLD 66

Query: 246 TPESPAEC--LAEIVKNPPRTGLIGALDDAYKLYESEFTSEIVEEVLKLSYGKGKEALKF 419
            P  P +   + EI+ N P   +  AL+D         T + VEEVLKLSY     ++KF
Sbjct: 67  FPNLPFQIKLMCEIIANSPSLDVEKALEDT----GIHATQQDVEEVLKLSYRFPGSSVKF 122

Query: 420 FKWAETKLSGKHTQVAWNQIVDVLGKS 500
           F+W+  KL+ +H+  AWN I+D+LGK+
Sbjct: 123 FRWSGRKLNDQHSPYAWNLIIDMLGKN 149


>ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527826|gb|EEF29924.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 46/143 (32%), Positives = 72/143 (50%)
 Frame = +3

Query: 72  GKNHYHSNSDKKHRETSRKHRERSPDREIAERSTKFPKKSPTEYQQKAHKNPPTISQNTP 251
           G +H + +S KK +  S      S     A  +T +P K PT     ++   P +S    
Sbjct: 13  GHDHNNESSYKKPQHHSLSSSSSSA-AAAATTTTAYPNKHPTF---PSYLETPNLSPKI- 67

Query: 252 ESPAECLAEIVKNPPRTGLIGALDDAYKLYESEFTSEIVEEVLKLSYGKGKEALKFFKWA 431
               + L EI+   P + +   LD+   LY S++    VE+V+KLSY     A+KFF+WA
Sbjct: 68  ----KLLCEIIAKIPSSTVETILDET-GLYVSQYD---VEQVIKLSYSFPGPAVKFFRWA 119

Query: 432 ETKLSGKHTQVAWNQIVDVLGKS 500
             +L   H+  +WN +VD+LGK+
Sbjct: 120 GFRLQDNHSPYSWNLVVDLLGKN 142


>ref|XP_006383312.1| hypothetical protein POPTR_0005s14380g, partial [Populus
           trichocarpa] gi|550338919|gb|ERP61109.1| hypothetical
           protein POPTR_0005s14380g, partial [Populus trichocarpa]
          Length = 497

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
 Frame = +3

Query: 123 RKHRERSPDREIAERSTKFPKKSPTEYQQKAHKNPPTISQNTPESPAECLAEIVKNPPRT 302
           RKHR        +  S+   KK   +   +    PPTI         + L EI+ N P  
Sbjct: 20  RKHRHHH-----SPSSSSITKKPSFQSYLETPNLPPTI---------KLLCEIIANTPSH 65

Query: 303 GLIGALD-DAYKLYESEFTSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQI 479
            +   LD    ++ +++     VE+VLKLSY     A+KFF+WA  +L+ KH+  +WN +
Sbjct: 66  NVESVLDATVIRVKQTD-----VEQVLKLSYSSPGSAVKFFRWAGLQLNDKHSPYSWNLV 120

Query: 480 VDVLGKS 500
           VD+LGK+
Sbjct: 121 VDLLGKN 127


>ref|XP_002301697.1| predicted protein [Populus trichocarpa]
          Length = 499

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
 Frame = +3

Query: 123 RKHRERSPDREIAERSTKFPKKSPTEYQQKAHKNPPTISQNTPESPAECLAEIVKNPPRT 302
           RKHR        +  S+   KK   +   +    PPTI         + L EI+ N P  
Sbjct: 20  RKHRHHH-----SPSSSSITKKPSFQSYLETPNLPPTI---------KLLCEIIANTPSH 65

Query: 303 GLIGALD-DAYKLYESEFTSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQI 479
            +   LD    ++ +++     VE+VLKLSY     A+KFF+WA  +L+ KH+  +WN +
Sbjct: 66  NVESVLDATVIRVKQTD-----VEQVLKLSYSSPGSAVKFFRWAGLQLNDKHSPYSWNLV 120

Query: 480 VDVLGKS 500
           VD+LGK+
Sbjct: 121 VDLLGKN 127


>gb|ESW35390.1| hypothetical protein PHAVU_001G231300g [Phaseolus vulgaris]
          Length = 489

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
 Frame = +3

Query: 159 AERSTKFP-KKSPTEYQQKAHKNPPTISQNTPESPA--ECLAEIVKNPPRTGLIGALDDA 329
           A R  + P   SP         N P+  Q+ P  P+  + L  ++     T    A++ A
Sbjct: 7   ARRKRRHPFSSSPPSPPLSKRPNFPSF-QDIPNLPSNVKSLCHLIA----TTSAAAIEHA 61

Query: 330 YKLYESEFTSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIVDVLGKS 500
            +  ++  T + VEEVLKLSYG   +A+KFF+W+   L   HT  +WN +VD+LGK+
Sbjct: 62  LQCADAAITPQDVEEVLKLSYGFPGQAVKFFRWSGRHLRDNHTPYSWNLVVDILGKN 118


>ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 502

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
 Frame = +3

Query: 69  MGKNHYHSNSDKK------HRETSRKHRERSPDREIAERSTKFPKKSPTEYQQKAHKNPP 230
           MGK H   N          H   +++H   + D             S T +Q     + P
Sbjct: 1   MGKKHKRPNHTASSPPPLHHDHRNKRHSSSTTD-------------SATHHQTPKRPSFP 47

Query: 231 TISQNTPESP-AECLAEIVKNPPRTGLIGALDDAYKLYESEFTSEIVEEVLKLSYGKGKE 407
           T  +    SP    L EI+ N P + +   L D         + E VE+ LKLSYG    
Sbjct: 48  TYLETPNLSPKVRLLCEIIANTPSSTVEEVLHDT----AIRVSPEDVEDSLKLSYGFPGS 103

Query: 408 ALKFFKWAETKLSGKHTQVAWNQIVDVLGKS 500
           A+KFF+W+  +L+  H+  +WN +VD+LGK+
Sbjct: 104 AVKFFRWSGHQLNDNHSPYSWNLVVDMLGKN 134


>emb|CBI33534.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
 Frame = +3

Query: 159 AERSTKFPKKSPTEYQQKAHKNPPTISQNTPESP-AECLAEIVKNPPRTGLIGALDDAYK 335
           A R +     S T +Q     + PT  +    SP    L EI+ N P + +   L D   
Sbjct: 28  ARRHSSSTTDSATHHQTPKRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVEEVLHDT-- 85

Query: 336 LYESEFTSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIVDVLGKS 500
                 + E VE+ LKLSYG    A+KFF+W+  +L+  H+  +WN +VD+LGK+
Sbjct: 86  --AIRVSPEDVEDSLKLSYGFPGSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKN 138


>ref|XP_006482140.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Citrus sinensis]
          Length = 482

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 41/126 (32%), Positives = 58/126 (46%)
 Frame = +3

Query: 123 RKHRERSPDREIAERSTKFPKKSPTEYQQKAHKNPPTISQNTPESPAECLAEIVKNPPRT 302
           R H + SPD     + + F               PPTI         + L EI+ N P  
Sbjct: 8   RHHGDPSPDPHNKRKRSTFASHLDVP------NLPPTI---------KTLCEIIANTPSP 52

Query: 303 GLIGALDDAYKLYESEFTSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIV 482
            +   LD          + E VE+VLK SY     A+KFF+W+  +L+ KH+  AWN +V
Sbjct: 53  TVEDVLDKTL----IRVSQETVEQVLKFSYSHPGPAVKFFRWSAYQLNDKHSPYAWNLVV 108

Query: 483 DVLGKS 500
           D+LGK+
Sbjct: 109 DLLGKN 114


>ref|XP_004503139.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cicer arietinum]
          Length = 482

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/95 (34%), Positives = 56/95 (58%)
 Frame = +3

Query: 216 HKNPPTISQNTPESPAECLAEIVKNPPRTGLIGALDDAYKLYESEFTSEIVEEVLKLSYG 395
           HK+P +  +  P S  + L EI+   P   +  +L+++        T + VE+VLKLSY 
Sbjct: 25  HKSPDS-PKPLPLSKIKSLFEIISTNPSLTVEKSLEES----SINVTPQDVEQVLKLSYR 79

Query: 396 KGKEALKFFKWAETKLSGKHTQVAWNQIVDVLGKS 500
              +A+KFF+W+  +++  HT  AWN ++D+LGK+
Sbjct: 80  FPAQAVKFFRWSGHRINHNHTPYAWNLVIDILGKN 114


>gb|EOY03976.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 485

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 37/121 (30%), Positives = 62/121 (51%)
 Frame = +3

Query: 138 RSPDREIAERSTKFPKKSPTEYQQKAHKNPPTISQNTPESPAECLAEIVKNPPRTGLIGA 317
           ++  R  ++RS   P ++PT  +     +  T     P+   + L EI+   P + +   
Sbjct: 3   KTKKRSHSQRSPSPPSRNPTPPKHPIFPSYQTTPNIQPK--VKLLCEIISTTPSSTVEAL 60

Query: 318 LDDAYKLYESEFTSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIVDVLGK 497
           L+ A        T   VE VLKLSY    +A+KFF+W+  +L  +H+  +WN +VD+LGK
Sbjct: 61  LEGA----GLRVTQPDVENVLKLSYSFPSQAVKFFRWSGYQLQHQHSPYSWNLVVDLLGK 116

Query: 498 S 500
           +
Sbjct: 117 N 117


>ref|XP_006430632.1| hypothetical protein CICLE_v10011615mg [Citrus clementina]
           gi|557532689|gb|ESR43872.1| hypothetical protein
           CICLE_v10011615mg [Citrus clementina]
          Length = 482

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/126 (30%), Positives = 58/126 (46%)
 Frame = +3

Query: 123 RKHRERSPDREIAERSTKFPKKSPTEYQQKAHKNPPTISQNTPESPAECLAEIVKNPPRT 302
           R H + SPD     + + F               PPTI         + L EI+ N P  
Sbjct: 8   RHHDDPSPDPHNKRKRSTFASHLDVP------NLPPTI---------KTLCEIIANTPSP 52

Query: 303 GLIGALDDAYKLYESEFTSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIV 482
            +   LD          + E VE+VL+ SY     A+KFF+W+  +L+ KH+  AWN +V
Sbjct: 53  TVEDVLDKTL----IRVSQETVEQVLRFSYSHPGPAVKFFRWSAYQLNDKHSPYAWNLVV 108

Query: 483 DVLGKS 500
           D+LG++
Sbjct: 109 DLLGRN 114


>ref|XP_003580152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like isoform 1 [Brachypodium distachyon]
           gi|357164746|ref|XP_003580153.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like isoform 2 [Brachypodium distachyon]
          Length = 465

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +3

Query: 219 KNPPTISQNTPESPAECLAEIVKNPPRTGLIGALDDAYKLYESEFTSEIVEEVLK--LSY 392
           K  P   +   +SPAE   EIV+  P    +G ++ A        T+++ E+VLK  + Y
Sbjct: 6   KKSPEAPEGKEKSPAEAFLEIVERTP----LGEVETALISCNVVPTADVAEQVLKSDICY 61

Query: 393 GKGKEALKFFKWAETKLSGKHTQVAWNQIVDVLGKS 500
            + K A++FF+WA   L  K T  AWN ++D+LGK+
Sbjct: 62  SRPKSAVRFFRWASKSL--KLTAYAWNLLIDILGKA 95


>ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 485

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = +3

Query: 354 TSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIVDVLGKS 500
           T   VEEVLKLSYG   +A+KFF+W+   L+  HT  +WN +VD+LGK+
Sbjct: 69  TPHDVEEVLKLSYGFPGQAVKFFRWSGRHLNDNHTPYSWNLVVDILGKN 117


>gb|EMJ16546.1| hypothetical protein PRUPE_ppa005397mg [Prunus persica]
          Length = 463

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/49 (55%), Positives = 34/49 (69%)
 Frame = +3

Query: 354 TSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIVDVLGKS 500
           T E VEEVLKLSY     A+KFF+WA   L+  H+  AWN +VD+LGK+
Sbjct: 47  TQEDVEEVLKLSYAFPGPAVKFFRWAGHHLNDYHSPYAWNLVVDLLGKN 95


>ref|XP_006591332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 458

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/45 (51%), Positives = 34/45 (75%)
 Frame = +3

Query: 366 VEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIVDVLGKS 500
           VEEVLKLSYG   +++KFF+W+   L+  HT  +WN +VD+LG++
Sbjct: 74  VEEVLKLSYGFPGQSVKFFRWSGRHLNDNHTPYSWNLVVDILGRN 118


>ref|XP_003548696.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 492

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
 Frame = +3

Query: 165 RSTKFPKKSPTEYQQK----AHKNPPTISQNTPESPAECLAEIVKNPPRTGLIGALDDAY 332
           R  K P K+PT+  Q     +H + P +S     S A  L +I+       +  AL  + 
Sbjct: 16  RDLKHPSKNPTKPPQPNQFPSHLDAPNVS-----STARALCDILTRSSPQDIESALSSSG 70

Query: 333 KLYESEFTSEIVEEVLKLSYGKGKEALKFFKWAETKLSGKHTQVAWNQIVDVLGKS 500
            + E E T+E    VL+LSY     A+KFF+WA      KH    WN +VD+LGK+
Sbjct: 71  IVPEEECTNE----VLRLSYNYPSSAVKFFRWAGR--GKKHPVHTWNLMVDLLGKN 120