BLASTX nr result
ID: Ephedra27_contig00025749
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00025749
(443 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB51234.1| Protein strawberry notch [Morus notabilis] 82 7e-14
ref|XP_002444039.1| hypothetical protein SORBIDRAFT_07g006260 [S... 79 6e-13
ref|XP_002312224.2| hypothetical protein POPTR_0008s08070g [Popu... 77 2e-12
ref|XP_004972563.1| PREDICTED: protein strawberry notch homolog ... 77 2e-12
ref|XP_004972562.1| PREDICTED: protein strawberry notch homolog ... 77 2e-12
gb|EMJ14494.1| hypothetical protein PRUPE_ppa000351mg [Prunus pe... 77 3e-12
ref|XP_006300941.1| hypothetical protein CARUB_v10021321mg [Caps... 76 4e-12
ref|XP_004248286.1| PREDICTED: protein strawberry notch-like [So... 76 4e-12
ref|XP_006352591.1| PREDICTED: protein strawberry notch-like [So... 76 5e-12
ref|XP_006378614.1| hypothetical protein POPTR_0010s18220g [Popu... 76 5e-12
ref|XP_002315084.1| predicted protein [Populus trichocarpa] 76 5e-12
dbj|BAD02983.1| putative sno protein [Oryza sativa Japonica Group] 75 7e-12
ref|NP_001061272.2| Os08g0223700 [Oryza sativa Japonica Group] g... 75 7e-12
gb|EEC83117.1| hypothetical protein OsI_28276 [Oryza sativa Indi... 75 7e-12
ref|XP_004293788.1| PREDICTED: protein strawberry notch-like [Fr... 75 9e-12
ref|XP_003571536.1| PREDICTED: protein strawberry notch-like [Br... 75 9e-12
gb|AAC17076.1| Similar to D. melanogaster sno gene gb|U95760. ES... 74 2e-11
ref|NP_178053.4| protein EMBRYO DEFECTIVE 1135 [Arabidopsis thal... 74 2e-11
ref|XP_002889240.1| EMB1135 [Arabidopsis lyrata subsp. lyrata] g... 74 2e-11
ref|XP_004976757.1| PREDICTED: protein strawberry notch-like iso... 74 2e-11
>gb|EXB51234.1| Protein strawberry notch [Morus notabilis]
Length = 874
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLH---PTFPLPSQPRKS 253
GIDP+K+QLPC +C++ILNVP GL+RFNCPQC V++ VD SKL H P PLP P
Sbjct: 109 GIDPTKIQLPCANCKAILNVPHGLTRFNCPQCSVDLAVDVSKLKHFYPPPLPLPLPP--- 165
Query: 254 RRLSPPP 274
PPP
Sbjct: 166 ----PPP 168
>ref|XP_002444039.1| hypothetical protein SORBIDRAFT_07g006260 [Sorghum bicolor]
gi|241940389|gb|EES13534.1| hypothetical protein
SORBIDRAFT_07g006260 [Sorghum bicolor]
Length = 368
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Frame = +2
Query: 80 QGIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLH------PTFPLPSQ 241
QG+DP+K+QLPC C+++LNVP GL RF CPQC V++ VD SKL H P F P
Sbjct: 105 QGVDPTKIQLPCARCKAVLNVPHGLERFRCPQCGVDLAVDLSKLRHFLASAGPGFIPPPL 164
Query: 242 PRKSRRLSPPP 274
P L PPP
Sbjct: 165 PPPPPSLPPPP 175
>ref|XP_002312224.2| hypothetical protein POPTR_0008s08070g [Populus trichocarpa]
gi|550332647|gb|EEE89591.2| hypothetical protein
POPTR_0008s08070g [Populus trichocarpa]
Length = 1282
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLL-----HPTFPLPSQPR 247
GIDPSK+QLPC +C++ILNVP GL+RF CPQC V++ VD SK+ H T PLP P
Sbjct: 89 GIDPSKMQLPCANCKAILNVPHGLARFQCPQCFVDLAVDLSKIKQLFPPHATPPLPLPPP 148
Query: 248 KSRRLSPPP 274
L PP
Sbjct: 149 SRTVLPLPP 157
>ref|XP_004972563.1| PREDICTED: protein strawberry notch homolog 1-like isoform X2
[Setaria italica]
Length = 1275
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +2
Query: 80 QGIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLH------PTFPLPSQ 241
QG+DP+K+QLPC C+++LNVP GL+RF CPQC V++ VD SKL H P F P
Sbjct: 67 QGVDPTKIQLPCARCKAVLNVPHGLARFRCPQCGVDLAVDMSKLRHFLASAGPGFVPPPM 126
Query: 242 PRKSRRLSPPPNNSKAHRNF 301
P PPP H F
Sbjct: 127 P-------PPPPVPMPHMPF 139
>ref|XP_004972562.1| PREDICTED: protein strawberry notch homolog 1-like isoform X1
[Setaria italica]
Length = 1276
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +2
Query: 80 QGIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLH------PTFPLPSQ 241
QG+DP+K+QLPC C+++LNVP GL+RF CPQC V++ VD SKL H P F P
Sbjct: 67 QGVDPTKIQLPCARCKAVLNVPHGLARFRCPQCGVDLAVDMSKLRHFLASAGPGFVPPPM 126
Query: 242 PRKSRRLSPPPNNSKAHRNF 301
P PPP H F
Sbjct: 127 P-------PPPPVPMPHMPF 139
>gb|EMJ14494.1| hypothetical protein PRUPE_ppa000351mg [Prunus persica]
Length = 1257
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/59 (55%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKL---LHPTFPLPSQPRK 250
G+DP+K+QLPC +C++ILNVP GL+RF CPQC+V++ VD SKL P PLP P +
Sbjct: 88 GVDPTKIQLPCANCKAILNVPHGLARFRCPQCQVDLAVDVSKLQQFFSPRLPLPPPPEE 146
>ref|XP_006300941.1| hypothetical protein CARUB_v10021321mg [Capsella rubella]
gi|482569651|gb|EOA33839.1| hypothetical protein
CARUB_v10021321mg [Capsella rubella]
Length = 1333
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 8/72 (11%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSK--------LLHPTFPLPS 238
GIDP+K+QLPC +C++ILNVP GL+RF+CPQC VE+ VD SK L HP P P+
Sbjct: 108 GIDPTKMQLPCANCQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTAPLSHPNPPPPA 167
Query: 239 QPRKSRRLSPPP 274
P + PPP
Sbjct: 168 AP----PVPPPP 175
>ref|XP_004248286.1| PREDICTED: protein strawberry notch-like [Solanum lycopersicum]
Length = 1258
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLHPTFPLPSQPRKSRRL 262
GIDP+K+QLPC HC++ILNVP GLSRF+CPQC +++ VD SK+ S P R
Sbjct: 78 GIDPTKIQLPCAHCKAILNVPHGLSRFSCPQCGIDLAVDVSKIRQFLPQSSSNPAAPRPP 137
Query: 263 SPP 271
+PP
Sbjct: 138 APP 140
>ref|XP_006352591.1| PREDICTED: protein strawberry notch-like [Solanum tuberosum]
Length = 1258
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLHPTFPLPSQPRKSRRL 262
GIDP+K+QLPC HC++ILNVP GLSRF+CPQC +++ VD SK+ S P R
Sbjct: 78 GIDPTKIQLPCAHCKAILNVPHGLSRFSCPQCGIDLAVDVSKIRQFLPQSSSHPAALRPP 137
Query: 263 SPP 271
+PP
Sbjct: 138 APP 140
>ref|XP_006378614.1| hypothetical protein POPTR_0010s18220g [Populus trichocarpa]
gi|550330064|gb|ERP56411.1| hypothetical protein
POPTR_0010s18220g [Populus trichocarpa]
Length = 326
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLHPTFPLPSQPRKSRRL 262
G+DP+K+QLPC +C++ILNVP GL+RF CPQC +++ VD SK+ P P+ P SR +
Sbjct: 91 GVDPTKMQLPCANCKAILNVPHGLARFQCPQCFIDLAVDLSKIKQLFPPPPAIPPPSRAV 150
Query: 263 SPPP 274
P P
Sbjct: 151 LPLP 154
>ref|XP_002315084.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLHPTFPLPSQPRKSRRL 262
G+DP+K+QLPC +C++ILNVP GL+RF CPQC +++ VD SK+ P P+ P SR +
Sbjct: 91 GVDPTKMQLPCANCKAILNVPHGLARFQCPQCFIDLAVDLSKIKQLFPPPPAIPPPSRAV 150
Query: 263 SPPP 274
P P
Sbjct: 151 LPLP 154
>dbj|BAD02983.1| putative sno protein [Oryza sativa Japonica Group]
Length = 1398
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Frame = +2
Query: 80 QGIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLH----------PTFP 229
QG+DP+K+QLPC C++ILNVP GL+RF CPQC V++ VD SKL + P P
Sbjct: 99 QGVDPTKIQLPCARCKAILNVPHGLARFRCPQCDVDLAVDLSKLRNFLATAGPGFAPPLP 158
Query: 230 LPSQPRKSRRLSPPP 274
LP P PPP
Sbjct: 159 LPPPP-------PPP 166
>ref|NP_001061272.2| Os08g0223700 [Oryza sativa Japonica Group]
gi|255678242|dbj|BAF23186.2| Os08g0223700 [Oryza sativa
Japonica Group]
Length = 1396
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Frame = +2
Query: 80 QGIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLH----------PTFP 229
QG+DP+K+QLPC C++ILNVP GL+RF CPQC V++ VD SKL + P P
Sbjct: 99 QGVDPTKIQLPCARCKAILNVPHGLARFRCPQCDVDLAVDLSKLRNFLATAGPGFAPPLP 158
Query: 230 LPSQPRKSRRLSPPP 274
LP P PPP
Sbjct: 159 LPPPP-------PPP 166
>gb|EEC83117.1| hypothetical protein OsI_28276 [Oryza sativa Indica Group]
Length = 1488
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Frame = +2
Query: 80 QGIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLH----------PTFP 229
QG+DP+K+QLPC C++ILNVP GL+RF CPQC V++ VD SKL + P P
Sbjct: 99 QGVDPTKIQLPCARCKAILNVPHGLARFRCPQCDVDLAVDLSKLRNFLATAGPGFAPPLP 158
Query: 230 LPSQPRKSRRLSPPP 274
LP P PPP
Sbjct: 159 LPPPP-------PPP 166
>ref|XP_004293788.1| PREDICTED: protein strawberry notch-like [Fragaria vesca subsp.
vesca]
Length = 1253
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLHPTFPLPSQPRK 250
G+DP+K+QLPC +C++ILNVP GLSRF CPQC V++ VD SKL P P P +
Sbjct: 87 GVDPTKIQLPCANCKAILNVPHGLSRFQCPQCHVDLAVDVSKLKEFLLPPPPPPEE 142
>ref|XP_003571536.1| PREDICTED: protein strawberry notch-like [Brachypodium distachyon]
Length = 1311
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = +2
Query: 80 QGIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLHPTFPLPSQPRKSRR 259
QG+DP+K+QLPC C++ILNVP GL+RF+CPQC V++ VD SKL H L S P+
Sbjct: 100 QGVDPTKIQLPCARCKAILNVPHGLARFSCPQCGVDLAVDISKLQH---FLASAPQGFVP 156
Query: 260 LSPPP 274
PPP
Sbjct: 157 PPPPP 161
>gb|AAC17076.1| Similar to D. melanogaster sno gene gb|U95760. EST gb|N97148 and
gb|Z26221 come from this gene [Arabidopsis thaliana]
Length = 1257
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKL--------LHPTFPLPS 238
GIDP+K+QLPC +C++ILNVP GL+RF+CPQC VE+ VD SKL H P P+
Sbjct: 107 GIDPTKMQLPCANCQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTASQSHSNPPTPA 166
Query: 239 QPRKSRRLSPPP 274
P + PPP
Sbjct: 167 AP----TVPPPP 174
>ref|NP_178053.4| protein EMBRYO DEFECTIVE 1135 [Arabidopsis thaliana]
gi|332198112|gb|AEE36233.1| RING/FYVE/PHD zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1295
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKL--------LHPTFPLPS 238
GIDP+K+QLPC +C++ILNVP GL+RF+CPQC VE+ VD SKL H P P+
Sbjct: 107 GIDPTKMQLPCANCQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTASQSHSNPPTPA 166
Query: 239 QPRKSRRLSPPP 274
P + PPP
Sbjct: 167 AP----TVPPPP 174
>ref|XP_002889240.1| EMB1135 [Arabidopsis lyrata subsp. lyrata]
gi|297335081|gb|EFH65499.1| EMB1135 [Arabidopsis lyrata
subsp. lyrata]
Length = 1299
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Frame = +2
Query: 83 GIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKL--------LHPTFPLPS 238
GIDP+K+QLPC +C++ILNVP GL+RF+CPQC VE+ VD SKL HP P P+
Sbjct: 111 GIDPTKMQLPCANCQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTAPQSHPNPPTPT 170
Query: 239 QPRKSRRLSPPP 274
+PPP
Sbjct: 171 P-------APPP 175
>ref|XP_004976757.1| PREDICTED: protein strawberry notch-like isoform X2 [Setaria
italica]
Length = 1273
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 9/73 (12%)
Frame = +2
Query: 80 QGIDPSKLQLPCRHCRSILNVPPGLSRFNCPQCKVEITVDQSKLLH---------PTFPL 232
QG+DP+K+QLPC HC+++LNVP GL+RF CPQC V++ VD +KL + P+ P
Sbjct: 85 QGVDPTKIQLPCAHCQAVLNVPHGLARFRCPQCGVDLAVDHAKLQNFLASSNSAPPSGPA 144
Query: 233 PSQPRKSRRLSPP 271
P+ + ++SPP
Sbjct: 145 PAS-GLTTQVSPP 156