BLASTX nr result

ID: Ephedra27_contig00025738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025738
         (462 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002988183.1| hypothetical protein SELMODRAFT_426921 [Sela...    68   1e-09
ref|XP_002963472.1| hypothetical protein SELMODRAFT_80545 [Selag...    62   1e-07

>ref|XP_002988183.1| hypothetical protein SELMODRAFT_426921 [Selaginella moellendorffii]
           gi|300143915|gb|EFJ10602.1| hypothetical protein
           SELMODRAFT_426921 [Selaginella moellendorffii]
          Length = 154

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   ASSYWLRNLPSDYKIPSALSPDHEVEKWIRDKYERRLFCDQG-PPPEFMGQQLSQPVVPI 179
           AS+YW + LP   + PS  SPD EVE+WIRDKYE+RLFC    PPPE        P   I
Sbjct: 86  ASAYWEQRLPQGIQRPSPESPDSEVERWIRDKYEKRLFCPPDLPPPE-------APKFAI 138

Query: 180 PILVEDVNSEEWSPF 224
                 V S +W PF
Sbjct: 139 EETGASVRSSDWKPF 153


>ref|XP_002963472.1| hypothetical protein SELMODRAFT_80545 [Selaginella moellendorffii]
           gi|300168740|gb|EFJ35343.1| hypothetical protein
           SELMODRAFT_80545 [Selaginella moellendorffii]
          Length = 158

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   ASSYWLRNLPSDYKIPSALSPDHEVEKWIRDKYERRLFCDQG-PPPE 140
           A++YW + LP   + PS  SPD EVE+WIRDKYE+RLFC    PPPE
Sbjct: 90  AAAYWEQRLPQGIQRPSPESPDSEVERWIRDKYEKRLFCPPDLPPPE 136


Top