BLASTX nr result
ID: Ephedra27_contig00025610
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00025610
(462 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77845.1| unknown [Picea sitchensis] 80 4e-13
ref|XP_003538176.1| PREDICTED: exosome complex component MTR3-li... 75 1e-11
ref|XP_003539769.1| PREDICTED: exosome complex component MTR3-li... 71 1e-10
ref|XP_004506024.1| PREDICTED: exosome complex component MTR3-li... 70 3e-10
gb|AFK37792.1| unknown [Lotus japonicus] 70 3e-10
gb|ESW04267.1| hypothetical protein PHAVU_011G080900g [Phaseolus... 69 6e-10
ref|XP_004240385.1| PREDICTED: exosome complex component MTR3-li... 69 6e-10
ref|XP_002963856.1| hypothetical protein SELMODRAFT_80529 [Selag... 69 8e-10
ref|XP_002971806.1| hypothetical protein SELMODRAFT_441621 [Sela... 69 8e-10
gb|EXB38678.1| Exosome complex component [Morus notabilis] 68 1e-09
gb|EMJ06953.1| hypothetical protein PRUPE_ppa010255mg [Prunus pe... 68 1e-09
ref|XP_006358710.1| PREDICTED: exosome complex component MTR3-li... 68 1e-09
ref|XP_006846808.1| hypothetical protein AMTR_s00148p00071740 [A... 68 1e-09
ref|XP_002529931.1| Exosome complex exonuclease RRP41, putative ... 67 2e-09
ref|XP_004958418.1| PREDICTED: exosome complex component MTR3-li... 67 2e-09
tpg|DAA63745.1| TPA: hypothetical protein ZEAMMB73_187174 [Zea m... 67 2e-09
gb|EOY34400.1| 3'-5'-exoribonuclease family protein isoform 1 [T... 66 5e-09
gb|ABK95685.1| unknown [Populus trichocarpa] 66 5e-09
ref|XP_003562625.1| PREDICTED: exosome complex component MTR3-li... 65 7e-09
ref|XP_002314284.1| 3' exoribonuclease domain 1-containing famil... 65 7e-09
>gb|ADE77845.1| unknown [Picea sitchensis]
Length = 256
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +2
Query: 212 STYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVI 391
STY + + + K +L DGIR+D R L+CR AF+KT TKVI
Sbjct: 9 STYTVPAAAEDRKSHGRLLKDGIRSDGRQLLECRLAFMKTGAVNAAAGSAYAEFGSTKVI 68
Query: 392 VSVFGPRESKKAQMFSDVGRLNC 460
VSVFGPRES KAQ++SD GRLNC
Sbjct: 69 VSVFGPRESSKAQIYSDTGRLNC 91
>ref|XP_003538176.1| PREDICTED: exosome complex component MTR3-like [Glycine max]
Length = 255
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 212 STYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVI 391
+TY+ + + +R K+P D +R D R QCR AF +T TKVI
Sbjct: 10 ATYSPSPTTNRKKKPPIFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVI 69
Query: 392 VSVFGPRESKKAQMFSDVGRLNC 460
VSVFGPRESKKA M+SD+GRLNC
Sbjct: 70 VSVFGPRESKKAMMYSDIGRLNC 92
>ref|XP_003539769.1| PREDICTED: exosome complex component MTR3-like [Glycine max]
Length = 254
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +2
Query: 212 STYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVI 391
+TY+ + + D+ K+PS D R D RS QCR AF +T TKVI
Sbjct: 10 ATYSPSPTTDK-KKPSLFNEDLARPDGRSFHQCRPAFFRTGAVNAASGSAYAEVGNTKVI 68
Query: 392 VSVFGPRESKKAQMFSDVGRLNC 460
VSVFGPRESKKA M+SD+GRLNC
Sbjct: 69 VSVFGPRESKKAMMYSDIGRLNC 91
>ref|XP_004506024.1| PREDICTED: exosome complex component MTR3-like [Cicer arietinum]
Length = 257
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/92 (45%), Positives = 50/92 (54%)
Frame = +2
Query: 185 MSAIKSKVGSTYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXX 364
M+A +TY+ Q+ ++K P D IR D R QCR AF +T
Sbjct: 1 MAAKGGTTPATYSPCQTTGKNKPPL-FKEDWIRPDARGFHQCRPAFFRTGAVNAASGSAY 59
Query: 365 XXXXXTKVIVSVFGPRESKKAQMFSDVGRLNC 460
TKVIVSVFGPRESKKA M+SD GRLNC
Sbjct: 60 AEFGNTKVIVSVFGPRESKKAMMYSDSGRLNC 91
>gb|AFK37792.1| unknown [Lotus japonicus]
Length = 253
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/83 (48%), Positives = 50/83 (60%)
Frame = +2
Query: 212 STYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVI 391
+TY+ + + D+ K+ S I D +R D R QCR AF +T TKVI
Sbjct: 10 ATYSPSPTTDK-KKTSLIKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVI 68
Query: 392 VSVFGPRESKKAQMFSDVGRLNC 460
VSVFGPRESKKA ++SDVGRLNC
Sbjct: 69 VSVFGPRESKKAMLYSDVGRLNC 91
>gb|ESW04267.1| hypothetical protein PHAVU_011G080900g [Phaseolus vulgaris]
Length = 254
Score = 68.9 bits (167), Expect = 6e-10
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = +2
Query: 212 STYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVI 391
+TY+ + + D+ K P D +R D R QCR AF +T TKVI
Sbjct: 10 ATYSPSLTVDKKKPPL-FKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEVGNTKVI 68
Query: 392 VSVFGPRESKKAQMFSDVGRLNC 460
VSVFGPRESKKA M+SD GRLNC
Sbjct: 69 VSVFGPRESKKAMMYSDTGRLNC 91
>ref|XP_004240385.1| PREDICTED: exosome complex component MTR3-like isoform 1 [Solanum
lycopersicum] gi|460389492|ref|XP_004240386.1|
PREDICTED: exosome complex component MTR3-like isoform 2
[Solanum lycopersicum]
Length = 255
Score = 68.9 bits (167), Expect = 6e-10
Identities = 39/92 (42%), Positives = 49/92 (53%)
Frame = +2
Query: 185 MSAIKSKVGSTYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXX 364
M+ +TY+ + + + K+ D +R D R QCR A+LKT
Sbjct: 1 MAGKSGSTPTTYSPSPATRKKKRIPIADADWVRPDNRGFYQCRPAYLKTGAVSTAAGSAY 60
Query: 365 XXXXXTKVIVSVFGPRESKKAQMFSDVGRLNC 460
TKVIVSVFGPRESKKA M+SD GRLNC
Sbjct: 61 AEFGNTKVIVSVFGPRESKKAMMYSDTGRLNC 92
>ref|XP_002963856.1| hypothetical protein SELMODRAFT_80529 [Selaginella moellendorffii]
gi|300169124|gb|EFJ35727.1| hypothetical protein
SELMODRAFT_80529 [Selaginella moellendorffii]
Length = 250
Score = 68.6 bits (166), Expect = 8e-10
Identities = 42/83 (50%), Positives = 46/83 (55%)
Frame = +2
Query: 212 STYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVI 391
ST AL + R+ S DG R D R CRAAFL+T TKVI
Sbjct: 7 STQALEEEPHRAPVFSS---DGERIDGRHAQMCRAAFLRTGAVRAAAGSAYAESGDTKVI 63
Query: 392 VSVFGPRESKKAQMFSDVGRLNC 460
VSVFGPRESKKA+ FSD GRLNC
Sbjct: 64 VSVFGPRESKKAEAFSDAGRLNC 86
>ref|XP_002971806.1| hypothetical protein SELMODRAFT_441621 [Selaginella moellendorffii]
gi|300160938|gb|EFJ27555.1| hypothetical protein
SELMODRAFT_441621 [Selaginella moellendorffii]
Length = 250
Score = 68.6 bits (166), Expect = 8e-10
Identities = 42/83 (50%), Positives = 46/83 (55%)
Frame = +2
Query: 212 STYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVI 391
ST AL + R+ S DG R D R CRAAFL+T TKVI
Sbjct: 7 STQALEEEPHRAPVFSS---DGERIDGRHAQMCRAAFLRTGAVRAAAGSAYAESGDTKVI 63
Query: 392 VSVFGPRESKKAQMFSDVGRLNC 460
VSVFGPRESKKA+ FSD GRLNC
Sbjct: 64 VSVFGPRESKKAEAFSDAGRLNC 86
>gb|EXB38678.1| Exosome complex component [Morus notabilis]
Length = 257
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +2
Query: 185 MSAIKSKVGSTYALAQSGDRSKQPSDILHDGI---RNDERSPLQCRAAFLKTXXXXXXXX 355
M+A + +TY+ + + ++K PS +D + R D R QCR AF +T
Sbjct: 1 MAAKAASTPTTYSPSPTTQKTK-PSFFKNDNVDWVRPDGRGFHQCRPAFFRTGAVNAAAG 59
Query: 356 XXXXXXXXTKVIVSVFGPRESKKAQMFSDVGRLNC 460
TKVIVSVFGPRESKKA M+SD+GRLNC
Sbjct: 60 SAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNC 94
>gb|EMJ06953.1| hypothetical protein PRUPE_ppa010255mg [Prunus persica]
Length = 257
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +2
Query: 272 DGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVIVSVFGPRESKKAQMFSDVGR 451
D +R+D R QCR AF KT TKVIVSVFGPRESKKA M+SD+GR
Sbjct: 32 DWVRSDGREFHQCRPAFFKTGAVNAAAGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGR 91
Query: 452 LNC 460
LNC
Sbjct: 92 LNC 94
>ref|XP_006358710.1| PREDICTED: exosome complex component MTR3-like [Solanum tuberosum]
Length = 255
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/92 (41%), Positives = 49/92 (53%)
Frame = +2
Query: 185 MSAIKSKVGSTYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXX 364
M+ +TY+ + + + K+ D +R D R QCR A+L+T
Sbjct: 1 MAGKSGSTPTTYSPSPATRKKKRIPIADADWVRPDNRGFYQCRPAYLRTGAVSTAAGSAY 60
Query: 365 XXXXXTKVIVSVFGPRESKKAQMFSDVGRLNC 460
TKVIVSVFGPRESKKA M+SD GRLNC
Sbjct: 61 AEFGNTKVIVSVFGPRESKKAMMYSDTGRLNC 92
>ref|XP_006846808.1| hypothetical protein AMTR_s00148p00071740 [Amborella trichopoda]
gi|548849630|gb|ERN08389.1| hypothetical protein
AMTR_s00148p00071740 [Amborella trichopoda]
Length = 248
Score = 67.8 bits (164), Expect = 1e-09
Identities = 43/90 (47%), Positives = 51/90 (56%)
Frame = +2
Query: 191 AIKSKVGSTYALAQSGDRSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXX 370
A KS STY+ S K P+ +G+R+D R +CR AFL+T
Sbjct: 2 ASKSGTISTYSPLFS---RKNPN--FTNGVRSDGRHFHECRLAFLRTGAVNAASGSAYAE 56
Query: 371 XXXTKVIVSVFGPRESKKAQMFSDVGRLNC 460
TKVIVSVFGPRESKKA M+SD GRLNC
Sbjct: 57 FGNTKVIVSVFGPRESKKAMMYSDTGRLNC 86
>ref|XP_002529931.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
gi|223530561|gb|EEF32439.1| Exosome complex exonuclease
RRP41, putative [Ricinus communis]
Length = 180
Score = 67.4 bits (163), Expect = 2e-09
Identities = 44/93 (47%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = +2
Query: 200 SKVGS---TYALAQSGDRSKQPSDILH---DGIRNDERSPLQCRAAFLKTXXXXXXXXXX 361
SK GS TY+ S R +P H D +R D RS +CR A+ +T
Sbjct: 3 SKPGSAPTTYSPTPS--RKSRPPIFKHYDVDWVRPDGRSFSECRPAYFRTGAVNAAAGSA 60
Query: 362 XXXXXXTKVIVSVFGPRESKKAQMFSDVGRLNC 460
TKVIVSVFGPRESKKA M+SDVGRLNC
Sbjct: 61 YAEFGNTKVIVSVFGPRESKKAMMYSDVGRLNC 93
>ref|XP_004958418.1| PREDICTED: exosome complex component MTR3-like [Setaria italica]
Length = 261
Score = 67.0 bits (162), Expect = 2e-09
Identities = 44/99 (44%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Frame = +2
Query: 185 MSAIKSKVGSTYALAQSGDRSKQPSDILH-------DGIRNDERSPLQCRAAFLKTXXXX 343
MSA ++ G+ A SGD+ ++ + L D R D RS CR AF++T
Sbjct: 1 MSA-QAGTGTYSPAAASGDKRRERREELRRHLAEDADWPRADGRSFHDCRPAFMQTGPTT 59
Query: 344 XXXXXXXXXXXXTKVIVSVFGPRESKKAQMFSDVGRLNC 460
TKVIVSVFGPRESKKA M+SDVGRLNC
Sbjct: 60 AASGSAYAEFGKTKVIVSVFGPRESKKAMMYSDVGRLNC 98
>tpg|DAA63745.1| TPA: hypothetical protein ZEAMMB73_187174 [Zea mays]
Length = 261
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = +2
Query: 209 GSTYALAQSGDRSKQPSDILH-------DGIRNDERSPLQCRAAFLKTXXXXXXXXXXXX 367
G+ A +GDR ++ + L D R D RS CR AF++T
Sbjct: 8 GTYSPAAAAGDRRRERKEELRRHLAEDADWPRADGRSFHDCRPAFMQTGPTTAASGSAYA 67
Query: 368 XXXXTKVIVSVFGPRESKKAQMFSDVGRLNC 460
TKVIVSVFGPRESKKA M+SDVGRLNC
Sbjct: 68 EFGKTKVIVSVFGPRESKKAMMYSDVGRLNC 98
>gb|EOY34400.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao]
Length = 256
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/63 (53%), Positives = 38/63 (60%)
Frame = +2
Query: 272 DGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVIVSVFGPRESKKAQMFSDVGR 451
D +R D R QCR AF +T TKVIVSVFGPRESKKA M+SD+GR
Sbjct: 31 DWVRPDGRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGR 90
Query: 452 LNC 460
LNC
Sbjct: 91 LNC 93
>gb|ABK95685.1| unknown [Populus trichocarpa]
Length = 257
Score = 65.9 bits (159), Expect = 5e-09
Identities = 38/73 (52%), Positives = 42/73 (57%)
Frame = +2
Query: 242 RSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVIVSVFGPRESK 421
RS SD D +R D R QCR AF +T TKVIVSVFGPRESK
Sbjct: 22 RSSFFSDSDVDWLRPDGRDFQQCRPAFFRTGAVNSAAGSAYAEFGNTKVIVSVFGPRESK 81
Query: 422 KAQMFSDVGRLNC 460
KA ++SDVGRLNC
Sbjct: 82 KAMVYSDVGRLNC 94
>ref|XP_003562625.1| PREDICTED: exosome complex component MTR3-like [Brachypodium
distachyon]
Length = 262
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = +2
Query: 185 MSAIKSKVGSTYALAQSGDRSKQPSDILH-------DGIRNDERSPLQCRAAFLKTXXXX 343
MSA G+ A++G + ++ + L D R D RS CR AF++T
Sbjct: 1 MSAAAGTAGTYSPAAEAGGKRRERKEELRRHLAEDADWPRADGRSFHDCRPAFMQTGPTT 60
Query: 344 XXXXXXXXXXXXTKVIVSVFGPRESKKAQMFSDVGRLNC 460
TKVIVSVFGPRESKKA ++SD GRLNC
Sbjct: 61 AASGSAYAEFGKTKVIVSVFGPRESKKAMLYSDTGRLNC 99
>ref|XP_002314284.1| 3' exoribonuclease domain 1-containing family protein [Populus
trichocarpa] gi|222850692|gb|EEE88239.1| 3'
exoribonuclease domain 1-containing family protein
[Populus trichocarpa]
Length = 257
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/73 (52%), Positives = 42/73 (57%)
Frame = +2
Query: 242 RSKQPSDILHDGIRNDERSPLQCRAAFLKTXXXXXXXXXXXXXXXXTKVIVSVFGPRESK 421
RS SD D +R D R QCR AF +T TKVIVSVFGPRESK
Sbjct: 22 RSSFFSDSDVDWLRPDGRGFHQCRPAFFRTGAVNSAAGSAYAEFGNTKVIVSVFGPRESK 81
Query: 422 KAQMFSDVGRLNC 460
KA ++SDVGRLNC
Sbjct: 82 KAMVYSDVGRLNC 94