BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025482
         (589 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...    99   1e-18
ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citr...    96   5e-18
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    96   7e-18
ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containi...    96   9e-18
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus pe...    94   3e-17
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...    93   6e-17
gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protei...    91   2e-16
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    91   3e-16
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi...    90   4e-16
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...    90   5e-16
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...    89   7e-16
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...    89   7e-16
gb|ESW27479.1| hypothetical protein PHAVU_003G205400g [Phaseolus...    89   9e-16
ref|XP_006373506.1| pentatricopeptide repeat-containing family p...    89   1e-15
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...    89   1e-15
ref|XP_002329308.1| predicted protein [Populus trichocarpa]            89   1e-15
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...    87   3e-15
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps...    87   4e-15
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...    87   4e-15

>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           ILI+GHC   E D AL     M+EKGC   +  L V++  F  Q R+ DAY L+++ V +
Sbjct: 450 ILIQGHCVANEVDRALLCLNRMIEKGCNADAAVLGVLIGSFLGQKRIDDAYKLLVEIVSK 509

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
             T P + TY ++I  L   G  +EA  +  LM++H F   ++     I K G+ +DA  
Sbjct: 510 HGTSPRHGTYAKLIDNLLGIGKLEEALDLHCLMRNHEFTPIIEPFVQYISKFGSIEDAIK 569

Query: 364 FIKK---VNKDAIFGRACSIMVKAFCNAERLSEAREFVSKVPTDIVKRHFLLTI 516
           F+K        +++ R    + K+     RLS+A++ +SK+P  I KR  +L +
Sbjct: 570 FLKSKGTPRSHSVYFR----VFKSLLGNGRLSDAKDLLSKIPY-ISKRKKILEL 618


>ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citrus clementina]
            gi|557532932|gb|ESR44115.1| hypothetical protein
            CICLE_v10011236mg [Citrus clementina]
          Length = 671

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 3/183 (1%)
 Frame = +1

Query: 7    LIKGHCSKKETDHALALYEEMVEKGCEIHSPF-LQVIVSHFCNQDRVMDAYNLMLKAVEE 183
            LIKGHC   + D A   +++MVEK    H+ F + ++V+ +C+++R +DA   +   V E
Sbjct: 484  LIKGHCVAGDLDKAADCFQKMVEKEGTSHAGFAIDLLVNTYCSKNRAIDACKFVHNCVCE 543

Query: 184  RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
               KP + TY E+I  L      K+A  +  LMKDHGF   V      + K GT+DDA  
Sbjct: 544  YDLKPWHTTYKELIKNLLVQRGFKDALSLLCLMKDHGFPPFVDPFIKYVSKSGTSDDAIA 603

Query: 364  FIKKVNKDAIFGRACSI-MVKAFCNAERLSEAREFVSKVPTDIVKRHFLLTII-RKASGD 537
            F+K +        +  + + +AF  A R SEA++ +SK P  I     +L ++  K SG 
Sbjct: 604  FLKGMTSKRFPSMSVVLCLFEAFFQARRHSEAQDLLSKCPRYIRNHADVLNLLYSKKSGG 663

Query: 538  DSA 546
            DSA
Sbjct: 664  DSA 666


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           ILI+GHC+ KE D AL  + +M+EK C+  +  L+V+++ F +Q R+  AY L+++ V  
Sbjct: 447 ILIQGHCAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKLLVEMVNT 506

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
               P  ATY  +I KL      +EA  + HLMK   +    +   + I K GT +DA +
Sbjct: 507 AHLVPWQATYKLMINKLLGVRKLEEAINLLHLMKKQNYPPFPEPFIEYISKFGTVEDAGE 566

Query: 364 FIKKVNKDAIFGRACSIMV-KAFCNAERLSEAREFVSKVPTDIVKRHFLLTIIRKASGDD 540
           F+  ++      ++  + V ++F    R SEA++ + K P  I K   +  +        
Sbjct: 567 FLNALSAKKYPSQSAYVHVFESFFQEGRESEAKDLLYKCPHHIRKHPDICKLF------G 620

Query: 541 SAKSEVPTE 567
           SAKSE  TE
Sbjct: 621 SAKSEYATE 629


>ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
            mitochondrial-like [Citrus sinensis]
          Length = 671

 Score = 95.5 bits (236), Expect = 9e-18
 Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
 Frame = +1

Query: 7    LIKGHCSKKETDHALALYEEMVEKGCEIHSPF-LQVIVSHFCNQDRVMDAYNLMLKAVEE 183
            LIKGHC   + D A   +++MVEK    H+ + + ++V+ +C+++R +DA   +   V E
Sbjct: 484  LIKGHCVAGDLDKAADCFQKMVEKEGTSHAGYAIDLLVNTYCSKNRAIDACKFVHNCVRE 543

Query: 184  RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
               KP + TY E+I  L      K+A  +  LMKDHGF   V      + K GT+DDA  
Sbjct: 544  YDLKPWHTTYEELIKNLLVQRGFKDALSLLCLMKDHGFPPFVDPFIKYVSKSGTSDDAIA 603

Query: 364  FIKKVNKDAIFGRACSI-MVKAFCNAERLSEAREFVSKVPTDIVKRHFLLTII-RKASGD 537
            F+K +        +  + +  AF  A R SEA++ +SK P  +     +L ++  K SG 
Sbjct: 604  FLKGMTSKRFPSMSVVLCLFAAFFQARRHSEAQDLLSKCPRYVRNHADVLNLLYSKKSGG 663

Query: 538  DSA 546
            DSA
Sbjct: 664  DSA 666


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           ILI+GHC+  E D AL  + +M+EK C+  +  L V++S F NQ ++  AY L+++   +
Sbjct: 440 ILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNK 499

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
              +P  ATY ++I  L      +EA  +  LMK   +    +     I K GT  DA D
Sbjct: 500 AHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADD 559

Query: 364 FIKKV-NKDAIFGRACSIMVKAFCNAERLSEAREFVSKVPTDIVKRHFLLTIIRKASGDD 540
           F+K + +K+     A   +  +F N  R SEA++ + K P  I K + +  +   A  + 
Sbjct: 560 FLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNT 619

Query: 541 SAKSE 555
           +A ++
Sbjct: 620 TAATQ 624


>gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus persica]
          Length = 675

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 2/186 (1%)
 Frame = +1

Query: 1    AILIKGHCSKKETDHALALYEEMVEKGCEIHSPF-LQVIVSHFCNQDRVMDAYNLMLKAV 177
            A LI+GHC     ++A   +++M+EK    ++ +  +++V+ +C ++R  DAY L+  +V
Sbjct: 473  ASLIEGHCVAGNLNNASNCFQKMLEKEGAAYAGYAFELLVNAYCRKNRATDAYKLLHDSV 532

Query: 178  EERKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDA 357
             ER+ KP + TY  +I+KL   G  K+A  +  LMK+ GF   V    + + K GT DDA
Sbjct: 533  NERQLKPWHMTYKLLISKLLVQGGFKDALNILGLMKNDGFPPFVDPFIEYVSKSGTGDDA 592

Query: 358  YDFIKKVNKDAIFGRACSIMV-KAFCNAERLSEAREFVSKVPTDIVKRHFLLTIIRKASG 534
              F+K +  +     +  + V KA+  A R +EA+ F+SK P  I     +L +   A  
Sbjct: 593  IAFLKAMTSNRFPSTSVFLSVFKAYFKAGRHTEAQNFLSKCPGFIRNHADVLDLFLCAQS 652

Query: 535  DDSAKS 552
             + A S
Sbjct: 653  GEGAAS 658


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
 Frame = +1

Query: 4    ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
            ILI+GHC+  E D AL  + +M+EKGC+  +  L V+++ F  Q ++  AY L+++ V  
Sbjct: 464  ILIQGHCAANEVDTALVCFAKMIEKGCDADADLLDVLINGFLKQRKIEGAYKLLIEMVNM 523

Query: 184  RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
             + +P  ATY  +I  L       EA  + HLMK   +          + K G+ +DA +
Sbjct: 524  TRLRPWQATYKNLIENLLGVRKLDEAFALLHLMKKQSYPPYPDPFVQYLSKFGSVEDAAE 583

Query: 364  FIKKVNKDAIFGRACSIMV-KAFCNAERLSEAREFVSKVPTDIVKRHFLLTIIRKASGDD 540
            F K ++       A  + V K+F    R SEA+E + K P  I K   +  +     G  
Sbjct: 584  FFKALSVKEYPSSAAYVHVFKSFFKEGRDSEAKELLYKCPYHIRKLGEISKLFGSTEGKQ 643

Query: 541  SA 546
            +A
Sbjct: 644  TA 645


>gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 660

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 2/160 (1%)
 Frame = +1

Query: 7   LIKGHCSKKETDHALALYEEMVEKGCEIHSPF-LQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           LI+G C+  + + A A ++ MVEK    H+ +  + +V+ +C++ R MDA  L+ K V E
Sbjct: 472 LIEGCCAAGDLETASAYFQNMVEKEGVSHAGYAFEWLVNSYCSRKRAMDACKLLHKYVSE 531

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
            + +P + TY E+I KL   G  ++   +  LMKDHGF   V    D + K G+++DA  
Sbjct: 532 NQLRPWHTTYKELIRKLLAQGGFRDGLSLLGLMKDHGFPPFVDPFIDYVSKSGSSEDAIA 591

Query: 364 FIKKVNKDAIFGRACSIMV-KAFCNAERLSEAREFVSKVP 480
           F+K +        +  + V +AF  A R +EA++ +SK P
Sbjct: 592 FLKSMTSKRFPSLSVVLRVFEAFFKAARQNEAQDLLSKCP 631


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 1/181 (0%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           ILI+GHC   E   AL    +M+EK C+  +  L V+++ F +Q R+  AY L +  V++
Sbjct: 445 ILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDMVDK 504

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
            + +P  ATY  +I KL      +EA  +  LMK H      +     I + GT DDA D
Sbjct: 505 ARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHNHPPFPEPFVQYISRFGTVDDAAD 564

Query: 364 FIKKVN-KDAIFGRACSIMVKAFCNAERLSEAREFVSKVPTDIVKRHFLLTIIRKASGDD 540
           F+K ++ K+     A   + ++F  A R SEA++ + K P  I K   +  +   A  +D
Sbjct: 565 FLKALSVKEYPSTSAYLNVFQSFFRAGRHSEAKDLLFKCPHHIRKHPKISELFGSAKTED 624

Query: 541 S 543
           +
Sbjct: 625 A 625


>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cicer arietinum]
          Length = 635

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
 Frame = +1

Query: 1   AILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVE 180
           +ILI+G+C+  E D AL    +M+EKGC   +  + V+V  + +Q+++ DAY  + + V 
Sbjct: 448 SILIQGYCAANEVDKALHCLLKMIEKGCNADAGAISVLVDSWLSQEKIDDAYKFLAEMVR 507

Query: 181 ERKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAY 360
                P   TY ++I  L   G  +EA  +  LM  H +    + I   I K GT +DA 
Sbjct: 508 NCDASPRQPTYEKVIENLLGIGKLEEALVLLCLMWKHKYTPFTKPIVQFISKSGTVEDAE 567

Query: 361 DFIKKVNKDAIFGRACSIMV-KAFCNAERLSEAREFVSKVPTDIVKR 498
            F+K   K      +  + V ++F    +LSEA++ +SK P+ I +R
Sbjct: 568 KFLKAWRKGNPVSHSAYLHVFESFIREGKLSEAKDLLSKCPSRIRRR 614


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
           gi|557542189|gb|ESR53167.1| hypothetical protein
           CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           ILI+GHC+  E D AL  + +M+EK  +  +  L V+++ F +Q RV  AY L+++ +E+
Sbjct: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
              +P  AT+  +I KL  +   +EA  +  LMK   +    +     I K GTA+DA +
Sbjct: 508 VHLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTAEDASE 567

Query: 364 FIKKVNKDAIFGRACSIMV-KAFCNAERLSEAREFVSKVPTDI 489
           F+K ++       A  + V ++F N  R  EA++ + K P  I
Sbjct: 568 FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHI 610


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Citrus sinensis]
          Length = 639

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           ILI+GHC+  E D AL  + +M+EK  +  +  L V+++ F +Q RV  AY L+++ +E+
Sbjct: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
            + +P  AT+  +I KL  +   +EA  +  LMK   +    +     I K GT +DA +
Sbjct: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE 567

Query: 364 FIKKVNKDAIFGRACSIMV-KAFCNAERLSEAREFVSKVPTDI 489
           F+K ++       A  + V ++F N  R  EA++ + K P  I
Sbjct: 568 FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHI 610


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Glycine max]
          Length = 635

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 2/190 (1%)
 Frame = +1

Query: 4    ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
            ILI+GHCS  E D AL  + +M+EKGC+  +  L V+   F +Q R+  AY L+ +   +
Sbjct: 446  ILIQGHCSANEVDKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYELVAEISRK 505

Query: 184  RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIY-DVIVKCGTADDAY 360
             +  P  ATY ++I KL      +EA ++  LMK H +  P  L +   I K G+ +DA 
Sbjct: 506  CRISPWQATYKKLIEKLLGVMKFEEALELLRLMKSHNY-PPYHLPFVPYISKFGSVEDAE 564

Query: 361  DFIKKVNKDAIFGRACSIMV-KAFCNAERLSEAREFVSKVPTDIVKRHFLLTIIRKASGD 537
             F+K ++  +       + V ++     RLSEA++ + K P  I + H   + I K  G 
Sbjct: 565  AFLKALSVKSYPSHIVYVQVFESLFREGRLSEAKDLLYKTPHHI-RTH---SKICKLFGS 620

Query: 538  DSAKSEVPTE 567
               KS+   +
Sbjct: 621  SETKSDTQAQ 630


>gb|ESW27479.1| hypothetical protein PHAVU_003G205400g [Phaseolus vulgaris]
          Length = 636

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 50/169 (29%), Positives = 83/169 (49%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           +L++G+C   E D AL    +M+EKGC + +  L V+   F  Q R+ DAY L++K V +
Sbjct: 450 LLVQGYCVASEVDKALLCLHKMIEKGCNLDATVLSVLTDSFLGQKRIDDAYKLLVKVVTK 509

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
               P + TY ++I  L      +EA  +  L + H     ++     I   G+ +DA  
Sbjct: 510 HGASPSHGTYKKLIVNLLEIEKFEEALNLLCLTRKHKCTPILEPFVQYISNFGSVEDAVK 569

Query: 364 FIKKVNKDAIFGRACSIMVKAFCNAERLSEAREFVSKVPTDIVKRHFLL 510
           F+K       +     +  K+     RLS+A + +SK+P+ I KR  +L
Sbjct: 570 FLKSKGSSRSYLIYLRVF-KSLLGKGRLSDAEDLLSKIPSYISKRKEIL 617


>ref|XP_006373506.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550320328|gb|ERP51303.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 658

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
 Frame = +1

Query: 1    AILIKGHCSKKETDHALALYEEMVEK-GCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAV 177
            A LI+GHC   + + A   +++MVEK G       ++++V+ +C ++R  DA NL+   V
Sbjct: 468  ASLIEGHCVSGDLEKASDCFKKMVEKKGVTGAGYAVELLVNAYCLKNRAGDACNLLCDYV 527

Query: 178  EERKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDA 357
             + +  P   TY  +I+KL   G  K+A  +  LM+ HG    +   ++ + K GT DDA
Sbjct: 528  CQNQLHPWRTTYKVLISKLLAQGGFKDALNLLGLMQSHGIPPYIDPFFEFVSKSGTGDDA 587

Query: 358  YDFIKKVNKDAIFGRACSI-MVKAFCNAERLSEAREFVSKVPTDIVKRHFLLTII--RKA 528
              F+  +        + S+ + +AF NA+R SEA++F+SK P  I     +LT+    K+
Sbjct: 588  IAFMNAMTTKKFPSISVSLRLFEAFFNAKRHSEAQDFLSKCPVFIRNHADVLTLFCSMKS 647

Query: 529  SGDDSA 546
            S D +A
Sbjct: 648  SKDTAA 653


>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
           gi|548855973|gb|ERN13836.1| hypothetical protein
           AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           ILI+GHC   E   AL+ +++M+ KG E  +  L+V+V+ FCNQ+R  DAY L+   + +
Sbjct: 389 ILIQGHCLAGEVKEALSCFKKMLGKGVEADADLLEVLVAGFCNQNRPEDAYTLLSVMMTK 448

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
              KP  ATY  +I  L    M +EA K+  LMK     A V      I K G A+DA D
Sbjct: 449 THLKPWQATYKILIEGLLGRRMLEEALKLLLLMKKQKLPAFVDPFIGYISKNGMAEDAMD 508

Query: 364 FIKKVNKDAIFGRACSIMV-KAFCNAERLSEAREFVSKVPTDIVK 495
            +K +        A  + + +AF    R ++A++ + + P  I K
Sbjct: 509 LLKTLTLGQNPSSAVYVNIFEAFMKEGRFTDAQDLLHRFPHHIRK 553


>ref|XP_002329308.1| predicted protein [Populus trichocarpa]
          Length = 658

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
 Frame = +1

Query: 1    AILIKGHCSKKETDHALALYEEMVEK-GCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAV 177
            A LI+GHC   + + A   +++MVEK G       ++++V+ +C ++R  DA NL+   V
Sbjct: 468  ASLIEGHCVSGDLEKASDCFKKMVEKKGVTGAGYAVELLVNAYCLKNRAGDACNLLCDYV 527

Query: 178  EERKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDA 357
             + +  P   TY  +I+KL   G  K+A  +  LM+ HG    +   ++ + K GT DDA
Sbjct: 528  CQNQLHPWRTTYKVLISKLLAQGGFKDALNLLGLMQSHGIPPYIDPFFEFVSKSGTGDDA 587

Query: 358  YDFIKKVNKDAIFGRACSI-MVKAFCNAERLSEAREFVSKVPTDIVKRHFLLTII--RKA 528
              F+  +        + S+ + +AF NA+R SEA++F+SK P  I     +LT+    K+
Sbjct: 588  IAFMNAMTTKKFPSISVSLRLFEAFFNAKRHSEAQDFLSKCPVFIRNHADVLTLFCSMKS 647

Query: 529  SGDDSA 546
            S D +A
Sbjct: 648  SKDTAA 653


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323443|gb|EFH53864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 618

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           ILI+GHC   E D ALA +  M+EKG +I S  L V++  F  Q+R+  A   +++ V+ 
Sbjct: 442 ILIQGHCKNNELDRALACFANMLEKGFDIDSNLLDVLIDGFLIQNRIEGASIFLMEMVKN 501

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
              KP  +TY  +I KL      KEA  +  LMK   + A  +     + K GT +DA  
Sbjct: 502 ANVKPWQSTYKRLIDKLLEIKKGKEALDLLQLMKKQNYPAYAEAFDGYLAKFGTLEDAKK 561

Query: 364 FIKKV-NKDAIFGRACSIMVKAFCNAERLSEAREFVSKVP 480
           F+  + +KD+    A   +++AF    RL++A+  +   P
Sbjct: 562 FLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFICP 601


>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
           gi|565465717|ref|XP_006290750.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
           gi|482559456|gb|EOA23647.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
           gi|482559457|gb|EOA23648.1| hypothetical protein
           CARUB_v10016848mg [Capsella rubella]
          Length = 618

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
 Frame = +1

Query: 4   ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
           ILI+GHC   E D A A +  M+EKG ++ S  L+V++  F +Q+R+  AY  +++ V  
Sbjct: 442 ILIQGHCKNNELDKAFACFANMLEKGFDVDSDLLEVLIGGFLSQNRIEGAYKFLMEMVRN 501

Query: 184 RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
              +P  +TY  +I KL      +EA  +  +MK   + A  +     + K GT +DA  
Sbjct: 502 ANVRPWQSTYKILIDKLLEIKKGEEALDLLQMMKKQNYPAYAEPFDGYLAKFGTLEDAKK 561

Query: 364 FIKKV-NKDAIFGRACSIMVKAFCNAERLSEAREFVSKVP 480
           F+  + +KD+    A   +++AF    RL++A+  +   P
Sbjct: 562 FLDVLSSKDSPTFAAYFHVIEAFYREGRLTDAKNLLFICP 601


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 1/185 (0%)
 Frame = +1

Query: 4    ILIKGHCSKKETDHALALYEEMVEKGCEIHSPFLQVIVSHFCNQDRVMDAYNLMLKAVEE 183
            +LI+GHC   E D AL  + +M+EK  +  +  L V+++ F +Q RV  AY L+ + V +
Sbjct: 449  VLIQGHCFAGEVDKALFCFAKMMEKNVDTDADLLDVLLNGFLSQRRVFGAYQLLTELVNK 508

Query: 184  RKTKPPYATYTEIITKLCNSGMPKEACKMFHLMKDHGFLAPVQLIYDVIVKCGTADDAYD 363
             + +P  ATY  +I KL      +EA  +   MK H +    +     I K GT +DA +
Sbjct: 509  FQMRPWQATYKLVIQKLLGERKFEEALDLLRRMKKHNYPPFPEPFLQYISKSGTVEDAVE 568

Query: 364  FIKKVN-KDAIFGRACSIMVKAFCNAERLSEAREFVSKVPTDIVKRHFLLTIIRKASGDD 540
            F+K ++ KD     A   + ++F    R SEA++ + K P  I ++H  +  +  +S  +
Sbjct: 569  FLKALSVKDYPSVSAYQHVFQSFFAEGRHSEAKDLLYKCPYHI-RQHPAICGLFGSSNSN 627

Query: 541  SAKSE 555
            S K++
Sbjct: 628  SGKAK 632