BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025444
         (1335 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis]    59   5e-06

>gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis]
          Length = 667

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 28/223 (12%)
 Frame = -1

Query: 1260 DNNHYSNEPLLVQRN------DVETNPLVNDRWGEPFSEASSDHPLVEDALVLDRYDPLN 1099
            DN++   E   ++R+      DV T  + N RWGE   +  +D    +D +  D Y+P  
Sbjct: 139  DNDYIGEEYRDLRRDLPRDDGDVGTKLVDNGRWGEQVDDLFAD----KDGMAFDHYEP-- 192

Query: 1098 VNDDGDNRRNKRHQNEKPDGSHTGISSSKQDPDHRSRQG-HLQKKP------ERCYICGH 940
              D G +R++ R +N   + S      S QD   R R G  + K+P      + CY CG 
Sbjct: 193  --DKGYDRKD-RDENRWRESSGGSALGSSQDNVGRERDGDRVLKRPNHLKFQQNCYGCGA 249

Query: 939  LGHLQCQCPLPMKHKFKGFFLR-----------NTAGNNLNRIKRDRASESSRQAMRSET 793
            LGH    C  P KH  +  F R           +  G  L R +    S  + ++ R   
Sbjct: 250  LGHKMRDC--PRKHSSRRKFTRFERSQDDDIEKSRGGGELERFR--SKSRGNMRSTRLRH 305

Query: 792  KTSKWRDHSRKYSHGENNIDAEERTDSILKK----RKRSRHQS 676
            K  KW   S +      N ++ + TD +  K    +KRS+ ++
Sbjct: 306  KNDKWTSDSGQLRMSMKNGNSSD-TDRVRGKEHGVKKRSKRET 347