BLASTX nr result

ID: Ephedra27_contig00025375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025375
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]      60   2e-07
ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...    57   3e-06

>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
 Frame = +3

Query: 3   LMVLASARKALNPQDHTIFRNSCPQIRQIRTLPQVFPPRNYCSXXXXXXXXXXXT---NQ 173
           L+ L  A   L+ Q H+  R  C Q+ +   L  + P ++  S           +   N 
Sbjct: 8   LISLRLANSFLSTQIHSSTRPPCSQVIRFSQLSSIVPNQSRGSHLINTHQKLFFSSTPNS 67

Query: 174 VLNILKEKEWCNETVEKLDGIS-DISERTVALALKTLTENPEKALSFFTWYKNHPSYKPS 350
           V+ ++   EW  E   +LD  +   +   V   LK L +NP+KA  FF W      ++PS
Sbjct: 68  VVELVLANEWSTELENELDDSNLGWTHERVIYVLKKLDKNPQKASVFFNWVSQKDGFRPS 127

Query: 351 SSLYNVLVRMVGGKAKHMQEFW 416
           S LY++++R++    K M+ FW
Sbjct: 128 SLLYSLMLRIL--VLKDMKRFW 147


>ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cicer arietinum]
          Length = 641

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +3

Query: 168 NQVLNILKEKEWCNETVEKLDGI-SDISERTVALALKTLTENPEKALSFFTWYKNHPSYK 344
           + +L ++   +W  +   +L+   S ++  TV   LK L +NPEKA SFF W      + 
Sbjct: 67  HSILELVYSNDWSQDLEHELENCRSSLTHETVVYVLKRLDKNPEKAFSFFNWVSKKEWFM 126

Query: 345 PSSSLYNVLVRMVGGKAKHMQEFW 416
            SSS+Y++++R++  + + M++FW
Sbjct: 127 ASSSVYSLIIRVLANQ-ETMKQFW 149


>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
           gi|548855973|gb|ERN13836.1| hypothetical protein
           AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = +3

Query: 174 VLNILKEKEWCNETVEKLDGIS-DISERTVALALKTLTENPEKALSFFTWYKNHPSYKPS 350
           V  ++ +K WC E   +L+ ++  +++  V   LK L ++P  +L FF W  +  + KPS
Sbjct: 10  VTKLVSQKGWCEEIENQLNKLNLKLTDEGVLFVLKELEKSPRNSLGFFKWVCDKMALKPS 69

Query: 351 SSLYNVLVRMVGGKAKHMQEFWEV 422
           S  YN+++R++G K   M++FW V
Sbjct: 70  SVAYNLMLRILGVK-DSMKDFWWV 92


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