BLASTX nr result
ID: Ephedra27_contig00025280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00025280
(708 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY19734.1| Copia-like retrotransposable element, putative [T... 146 1e-35
emb|CAA36616.1| unnamed protein product [Solanum tuberosum] 134 3e-34
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera] 132 2e-33
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera] 146 7e-33
emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera] 130 1e-32
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera] 127 3e-32
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao] 134 3e-32
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera] 130 4e-32
emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis] 135 6e-32
emb|CAN84015.1| hypothetical protein VITISV_017117 [Vitis vinifera] 131 6e-32
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera] 127 8e-32
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 130 1e-31
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] 126 3e-31
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 128 3e-31
emb|CAN83808.1| hypothetical protein VITISV_026963 [Vitis vinifera] 128 3e-31
emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera] 129 3e-31
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] 128 4e-31
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa] 132 7e-31
emb|CAN65603.1| hypothetical protein VITISV_021511 [Vitis vinifera] 126 7e-31
gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum] 130 9e-31
>gb|EOY19734.1| Copia-like retrotransposable element, putative [Theobroma cacao]
Length = 1207
Score = 146 bits (368), Expect(2) = 1e-35
Identities = 74/189 (39%), Positives = 117/189 (61%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY R+ +L KGF MS+ P L Y+ +G+ ++++ YVDDI++T N+EL+ +FK
Sbjct: 849 RAWYARVDNYLCNKGFHMSESKPTL-YVCCSSAGKQVIVSIYVDDILVTSLNTELLLKFK 907
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPI--E 356
E+ EF++TNLG Y+LG + + F+ LHQ+ Y +L+ +QN + PI
Sbjct: 908 KEMMEEFKMTNLGLITYFLGLEFVQAEKFIILHQQKYATELLKKFKMQNCKAISTPIAAN 967
Query: 357 LGFDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
+ F + NE+ D Y+ +I SLLYL+++ PDI F+ L+RFMH P HL+AAKR+
Sbjct: 968 VKFSLSNNEELADATLYRRLIGSLLYLSSSGPDIMFSTSLLSRFMHQPTVTHLSAAKRIL 1027
Query: 537 QYLVDKIDY 563
+Y+ I++
Sbjct: 1028 RYIKGSINF 1036
Score = 30.4 bits (67), Expect(2) = 1e-35
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 598 NYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGYL 705
N+G+K + + + + + DSD+A KSTTG++
Sbjct: 1035 NFGIKFGREQSHHLQGFLDSDWAGSLDDSKSTTGFV 1070
>emb|CAA36616.1| unnamed protein product [Solanum tuberosum]
Length = 390
Score = 134 bits (336), Expect(2) = 3e-34
Identities = 65/181 (35%), Positives = 107/181 (59%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R W++R +F+K++G++ + + ++ E G++ +L YVDDII+TGD+ IK K
Sbjct: 45 RAWFERFTQFVKRQGYVQGQADHTMFTRHSLE-GKTTVLIVYVDDIILTGDDVVEIKNLK 103
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+ L EFEI +LG KY+LG ++ + + + Q+ Y +L+ G+ P + PI+
Sbjct: 104 ERLASEFEIKDLGPLKYFLGMEVARSKKGIIVSQRKYVLDLLKETGMSGCRPTETPIDPN 163
Query: 363 FDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVCQY 542
K K +D YQ ++ L+YL++TRPDI FAV + +FMH P+E H A R+ +Y
Sbjct: 164 LKFVKEGKLIDKGQYQRLVGKLIYLSHTRPDISFAVSLVIQFMHYPREEHQEAVYRILRY 223
Query: 543 L 545
L
Sbjct: 224 L 224
Score = 38.1 bits (87), Expect(2) = 3e-34
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 604 GVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGY 702
G+ KKN+ + E YTD+D+A I R+ST+GY
Sbjct: 231 GLFFKKNEQRSLEAYTDADWAGSSIDRRSTSGY 263
>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
Length = 1088
Score = 132 bits (331), Expect(2) = 2e-33
Identities = 62/189 (32%), Positives = 117/189 (61%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY R+ + K+GF L+ T E G+ +++ YVD++I TG++ + K+FK
Sbjct: 732 RAWYSRIESYFIKEGFNKCPYEHTLFTKTAE-GGKILIVCLYVDELIFTGNDESMFKQFK 790
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+ +EF++T+L K +Y+LG ++ + ++ + ++Q+ Y + +LE L P P+ G
Sbjct: 791 KSMMVEFDMTDLEKLRYFLGIEVMQKTDGIFINQRKYAQEVLERFNLYQCNPVHNPVVPG 850
Query: 363 FDSNKNEKKVDVKN--YQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
F ++++ V+V Y+ ++ SL+YLT TRPD+ F+V ++R+M +P E+HL AAKR+
Sbjct: 851 FKLTRDKEGVEVDGTLYKQMVGSLMYLTATRPDLMFSVSLISRYMEHPTESHLLAAKRIL 910
Query: 537 QYLVDKIDY 563
+Y+ +++
Sbjct: 911 RYVKGTVEF 919
Score = 37.4 bits (85), Expect(2) = 2e-33
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 601 YGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGYL 705
+GV KK + F YTDSD+A D RKST+GY+
Sbjct: 919 FGVFYKKGGDDKFIGYTDSDYAGDHDDRKSTSGYV 953
>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
Length = 1084
Score = 146 bits (368), Expect = 7e-33
Identities = 73/194 (37%), Positives = 120/194 (61%), Gaps = 2/194 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY R+ + K+GF + L+ T + G+ ++++ YVDD+I TG++ + +FK
Sbjct: 753 RAWYSRIEAYFIKEGFERCSCDHTLFIKTGD-GGKILIVSLYVDDLIFTGNDESMFVKFK 811
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+ + +EF++T+LGK KY+LG ++ ++S + + Q+ Y + +LE G++ S + PI G
Sbjct: 812 NSMKLEFDMTDLGKMKYFLGVEVLQNSEGIYISQRKYAKEVLERFGMEKSNSVKNPIVPG 871
Query: 363 FDSNKNE--KKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
KNE KVD Y+ ++ SL+YLT TRPD+ + VC ++RFM +P E HL AAKRV
Sbjct: 872 DRLTKNEGGVKVDATKYKQLVGSLMYLTTTRPDLMYVVCLISRFMASPTEMHLQAAKRVL 931
Query: 537 QYLVDKIDYNNNKS 578
+YL +D + S
Sbjct: 932 RYLKGDVDDRKSTS 945
>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
Length = 1493
Score = 130 bits (326), Expect(2) = 1e-32
Identities = 60/181 (33%), Positives = 107/181 (59%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R W+ R + +K +G+ + + + + + GR +L YVDDII+TGD++ ++ K
Sbjct: 1138 RAWFDRFAKVIKNQGYQQGQ-SDHTMFFKQSNDGRMTILIVYVDDIILTGDDTGEVERLK 1196
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
L EFE+ +LG+ +Y+LG ++ + + + Q+ Y +L G+ +P PI+
Sbjct: 1197 KVLATEFEVKDLGQMRYFLGMEVARSRKGISISQRKYVLDLLTETGMLGCKPSDTPIKAR 1256
Query: 363 FDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVCQY 542
+ K VD + YQ ++ L+YL++TRPDI FAV ++++MH+PKE+HL A ++ +Y
Sbjct: 1257 NRMESDGKPVDREKYQRLVGRLIYLSHTRPDIAFAVSVVSQYMHSPKESHLEAVYKILRY 1316
Query: 543 L 545
L
Sbjct: 1317 L 1317
Score = 37.0 bits (84), Expect(2) = 1e-32
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 604 GVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGY 702
G+ KK+D+ E+YTD+D+A R+STTGY
Sbjct: 1324 GLFFKKSDSKKVEIYTDADWAGXADDRRSTTGY 1356
>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
Length = 1338
Score = 127 bits (319), Expect(2) = 3e-32
Identities = 66/189 (34%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY + + K+GF L ++ + G+ +++ YVDD+I TG++ + FK
Sbjct: 981 RAWYSXIESYFMKEGFKKCHYEHTL-FIKXGKGGKILIVCLYVDDLIFTGNDEIMFAXFK 1039
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+ +EF++T LGK +Y+LG ++ + S+ + ++QK YT +LE + P P+ G
Sbjct: 1040 KSMMLEFDMTXLGKMRYFLGIEVMQRSDGIFINQKKYTXEVLERFSMDKCNPVHNPMVPG 1099
Query: 363 FDSNKNEK--KVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
F KN +VD Y+ I+ SL+YLT T PD+ F V ++RF P E HL +AKR+
Sbjct: 1100 FXLMKNGDGVRVDSTFYKKIVGSLMYLTATXPDVMFVVSLISRFXDCPTELHLQSAKRIL 1159
Query: 537 QYLVDKIDY 563
+YL ID+
Sbjct: 1160 RYLKGTIDF 1168
Score = 38.1 bits (87), Expect(2) = 3e-32
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1
Query: 598 NYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGYL 705
++GV KK N YTDSD+A D RKST+GY+
Sbjct: 1167 DFGVFYKKGGNEELIAYTDSDYAGDLDDRKSTSGYV 1202
>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
Length = 1318
Score = 134 bits (337), Expect(2) = 3e-32
Identities = 67/190 (35%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGR-SILLAFYVDDIIITGDNSELIKEF 179
R WYK++ +L+ F S+ P L+ K G+ ++++ YVDD++ITG N + F
Sbjct: 960 RAWYKKIDAYLRSNKFFCSESEPTLY--VKSSLGKIQLIVSVYVDDLLITGPNKSDLNSF 1017
Query: 180 KDELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIEL 359
++++ EF++++LG+ Y+LG +I++ S+F+ LHQK Y +L+ ++ +P P+
Sbjct: 1018 RNKMKSEFDMSDLGEMSYFLGLEIQQRSDFICLHQKKYAGELLKRFKMEGCKPVSTPLTT 1077
Query: 360 GFDSNKNEKK--VDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRV 533
G K++ VDV Y+ +I LLYL+ +RPDI + L+RFM +P + HL AAKRV
Sbjct: 1078 GTKLCKDDGSTLVDVTQYRKLIGCLLYLSASRPDIMYTTSLLSRFMQSPTKTHLTAAKRV 1137
Query: 534 CQYLVDKIDY 563
+Y+ ++Y
Sbjct: 1138 LRYVKGTLNY 1147
Score = 31.2 bits (69), Expect(2) = 3e-32
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 598 NYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGY 702
NYG+ + +N E Y+DSD+A KST+GY
Sbjct: 1146 NYGLLYGQVENKELEGYSDSDWAGSYDDSKSTSGY 1180
>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
Length = 1265
Score = 130 bits (326), Expect(2) = 4e-32
Identities = 68/181 (37%), Positives = 109/181 (60%), Gaps = 2/181 (1%)
Frame = +3
Query: 9 WYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFKDE 188
WY + + K+GF L+ T++E G+ ++++ YVDD+I TG++ + +FK
Sbjct: 938 WYSXIEAYFMKEGFEKCDYEHTLFIKTRKE-GKVLIVSLYVDDLIFTGNDELMFTDFKRS 996
Query: 189 LGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELGFD 368
+ EF++T+LGK +Y+LG ++ + S+ + + QK Y +L+ G+ S PI GF
Sbjct: 997 MKDEFDMTDLGKMRYFLGLEVLQRSDGIFISQKKYALEVLQRFGMDKSNSVHNPIVPGFK 1056
Query: 369 SNKNE--KKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVCQY 542
K+E KVD Y+ ++ SL+YL TRPD+ F V ++R+M NP E HL AAKRV +Y
Sbjct: 1057 LMKDEGGVKVDKTYYKQVVGSLMYLXATRPDMMFVVSLISRYMENPTELHLQAAKRVLRY 1116
Query: 543 L 545
L
Sbjct: 1117 L 1117
Score = 35.0 bits (79), Expect(2) = 4e-32
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 595 TNYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGYL 705
T +G+ +K + YT+SD A D +RKST+GY+
Sbjct: 1121 TEFGIFYRKGGDDELVTYTBSDHAGDLDERKSTSGYV 1157
>emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis]
Length = 2029
Score = 135 bits (340), Expect(2) = 6e-32
Identities = 71/189 (37%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY+RL +L GF M K + L+ + +L+ YVDDII G + L+ +F
Sbjct: 1626 RAWYERLKSYLLSHGFEMGKVDKTLFI--RRHGSDFLLVQIYVDDIIFGGSSHTLVSQFS 1683
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
D + EFE++ +G+ ++LGFQI++ LHQ YT +L+ + + +P P+
Sbjct: 1684 DVMSSEFEMSMMGELSFFLGFQIKQTREGTFLHQGKYTRDLLKRFDMSDGKPVSTPMAST 1743
Query: 363 --FDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
D +++ + VD K ++++I SLLYLT +RPDIHF+VC ARF +P+ +H A KR+
Sbjct: 1744 AYLDPDEDGEPVDQKEFRSMIGSLLYLTASRPDIHFSVCLCARFQASPRVSHRQAVKRIF 1803
Query: 537 QYLVDKIDY 563
+YL IDY
Sbjct: 1804 RYLRATIDY 1812
Score = 28.9 bits (63), Expect(2) = 6e-32
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 598 NYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTG 699
+YG+ + + ++D+DFA I RKST+G
Sbjct: 1811 DYGIWYSSSSCLSLRAFSDADFAGCRIDRKSTSG 1844
>emb|CAN84015.1| hypothetical protein VITISV_017117 [Vitis vinifera]
Length = 1007
Score = 131 bits (329), Expect(2) = 6e-32
Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY+RL +FL KKGF M K N L+ TKE +L+ YVDDII N L +EF
Sbjct: 509 RAWYERLSKFLLKKGFKMGKINTTLFIKTKEND--MLLVQIYVDDIIFRATNVSLCEEFS 566
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIE-- 356
+ EFE++ +G+ ++LG QI++ ++Q Y +L+ ++ ++ + +
Sbjct: 567 KCMHSEFEMSMMGELNFFLGLQIKQLKEETLINQAKYIRDLLKRFNMEETKTMKTSMSSF 626
Query: 357 LGFDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
+ D ++ K +D Y+ +I SLLYLT +RPDI ++VC ARF PKE+HL+ AKR+
Sbjct: 627 IKLDKDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLSVAKRIL 686
Query: 537 QYLVDKID 560
+YL +D
Sbjct: 687 RYLKGTMD 694
Score = 33.1 bits (74), Expect(2) = 6e-32
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1
Query: 604 GVKIKKNDNFNFEVYTDSDFANDPIKRKSTTG 699
G+ K+DNF ++D+DFA+ ++RKST+G
Sbjct: 696 GLWYPKSDNFELIGFSDTDFADCKVERKSTSG 727
>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
Length = 1021
Score = 127 bits (318), Expect(2) = 8e-32
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 2/183 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY R+ + K+GF L+ T +E G+ ++++ YVDD+I TG++ + EFK
Sbjct: 669 RAWYSRIEAYFMKEGFEKCDYEHTLFIXTSKE-GKXLIVSLYVDDLIFTGNDELMFXEFK 727
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+ + EF++T+LGK +Y+LG ++ + S+ + + QK Y +L+ G+ S PI
Sbjct: 728 NSMKHEFDMTDLGKMRYFLGLEVLQISDGVFISQKKYALEVLKQFGMDKSNFVHNPIVPS 787
Query: 363 FDSNKNEKKVDVKN--YQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
F K+E V V N Y+ I+ SL+YL TR D+ F V ++R+M NP E HL AKRV
Sbjct: 788 FKLMKDEGGVKVDNTYYKQIVGSLMYLIATRLDMMFVVSLISRYMENPTELHLQVAKRVL 847
Query: 537 QYL 545
+YL
Sbjct: 848 RYL 850
Score = 37.0 bits (84), Expect(2) = 8e-32
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 595 TNYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGYL 705
T +G+ KK + YTDSD+A D +KST+GY+
Sbjct: 854 TEFGIFYKKGGDDELAAYTDSDYAGDLEDKKSTSGYV 890
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 130 bits (326), Expect(2) = 1e-31
Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R W + ++ + GF+ + N Y+ +G + + YVDD+I TG+N L ++FK
Sbjct: 682 RAWNTHIDKYFQDNGFVHCQ-NEYALYVKTFNNGDVLFICLYVDDLIFTGNNPNLFEDFK 740
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+ + EF++T++G YYLG ++++ N + + Q+ YT+ +L+ + + P P+E G
Sbjct: 741 ESMSREFDMTDMGLMSYYLGMEVKQTQNGIFVSQERYTKEVLKKFNMLDCNPVNTPMEGG 800
Query: 363 FDSNKNE--KKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
+K + +KVD +++++ SL YLTNTRPDI +AV + RFM P HL AAKR+
Sbjct: 801 LKLSKFDEGEKVDSTIFKSLVGSLRYLTNTRPDILYAVGVVCRFMEAPTSPHLKAAKRIL 860
Query: 537 QYLVDKIDY 563
YL ID+
Sbjct: 861 CYLKGTIDF 869
Score = 33.1 bits (74), Expect(2) = 1e-31
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 598 NYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGYL 705
++G+ ++N+ + DSDFA D RKSTTG++
Sbjct: 868 DFGLFYSPSNNYKLVGFCDSDFAGDVDDRKSTTGFV 903
>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 126 bits (317), Expect(2) = 3e-31
Identities = 64/188 (34%), Positives = 113/188 (60%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY + + K+GF L ++ + G+ ++++ YVDD+I TG+N + +FK
Sbjct: 683 RAWYSWIEAYFVKEGFERCNCEHTL-FIKMGDGGKILIVSLYVDDLIFTGNNESMFVKFK 741
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+ + +EF++T+LGK KY+L ++ ++ + + Q+ Y + +LE ++ S + PI G
Sbjct: 742 NSMKLEFDMTDLGKMKYFLNVEVLQNLEGIYISQRKYAKDVLEWFRMEKSNSVKNPIVPG 801
Query: 363 FDSNKNEK--KVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
K+E+ KV+ Y+ ++ SL++LT TRPD+ + V ++RFM +P E HL AAKRV
Sbjct: 802 VRLMKDEEGSKVNATMYKQLVGSLMHLTATRPDLMYVVSLISRFMASPTELHLQAAKRVL 861
Query: 537 QYLVDKID 560
+YL +D
Sbjct: 862 RYLKGTVD 869
Score = 35.4 bits (80), Expect(2) = 3e-31
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 604 GVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGYL 705
G+ +K N YTDSD+A D RKST+GY+
Sbjct: 871 GILYQKEGNGELIAYTDSDYAGDVDDRKSTSGYV 904
Score = 86.3 bits (212), Expect = 9e-15
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R W+ + + + G+ S + L +L + + G +ILL YVDD+IITG++ I+E K
Sbjct: 2104 RAWFAKFXSTIFRLGYTASPYDSAL-FLRRTDKG-TILLLLYVDDMIITGNDLSGIQELK 2161
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
D L +FE+ +LG Y+LG +I ++ L + Q Y +L GL +S+ +EL
Sbjct: 2162 DFLSQQFEMKDLGHLSYFLGLEITHSTDGLYITQAKYASDLLSQAGLTDSKNVDTLVELN 2221
Query: 363 --FDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAV 470
++ + + Y+ ++ SL+YLT TRPDI +AV
Sbjct: 2222 AHLTPSRGKPLSNPSLYRRLVGSLVYLTVTRPDISYAV 2259
>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 128 bits (322), Expect(2) = 3e-31
Identities = 66/189 (34%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY ++ EFL + G+ ++ + +L+ K G+ ++ YVDD+IITGD+ E I K
Sbjct: 939 RAWYGKIAEFLTQSGYSVTPADSSLF--VKANGGKLAIVLVYVDDLIITGDDVEEIFRTK 996
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+ L + FE+ LG+ K++LG ++++ + + L Q+ Y + +L+ G+ +P P+E
Sbjct: 997 ENLSVRFEMKELGQLKHFLGLEVDRTNEGIFLCQQKYAKDLLKKFGMLECKPISTPMEPN 1056
Query: 363 FDSNKNEKK--VDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
++E K D Y+ ++ SLLYLT T PDI +AV ++R+M NPK+ HL A +R+
Sbjct: 1057 AKMCEHEGKDLKDATMYRQLVGSLLYLTLTXPDISYAVGVMSRYMQNPKKPHLEAVRRIL 1116
Query: 537 QYLVDKIDY 563
+++ IDY
Sbjct: 1117 RHVKGTIDY 1125
Score = 33.5 bits (75), Expect(2) = 3e-31
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 598 NYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGYL 705
+YG+ KK ++ Y D+D+A D R STTGY+
Sbjct: 1124 DYGLLYKKXEDCKLVGYCDADYAGDHDTRXSTTGYV 1159
>emb|CAN83808.1| hypothetical protein VITISV_026963 [Vitis vinifera]
Length = 971
Score = 128 bits (321), Expect(2) = 3e-31
Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 2/183 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R W+ RL +KK GFI + + L ++ + G L YVDDIIITGD+ E I K
Sbjct: 746 RAWFDRLTRVVKKHGFIQCQADHTL-FMKHSKEGEMTLFIVYVDDIIITGDDEEEIGNLK 804
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIE-L 359
L EFEI +LG+ +Y+LG ++ + + + Q+ Y +L+ G+ +P P++ +
Sbjct: 805 KLLAREFEIKDLGQLRYFLGMEVGRTKEGIVVTQRKYVLDLLQETGMLGCKPVDTPMDPI 864
Query: 360 G-FDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
G D + + D YQ ++ L+YLT+TRPDI FA+ ++R+M+NP E H+ R+
Sbjct: 865 GKIDKDNDNHPTDKDRYQRLVGKLIYLTHTRPDIGFAMSMVSRYMNNPTERHMKVVYRIL 924
Query: 537 QYL 545
QYL
Sbjct: 925 QYL 927
Score = 33.9 bits (76), Expect(2) = 3e-31
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 604 GVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGY 702
G+ KK + EV+TD+D+A R+STTGY
Sbjct: 934 GLYFKKTSSREVEVFTDADWAGSLTDRRSTTGY 966
>emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera]
Length = 550
Score = 129 bits (325), Expect(2) = 3e-31
Identities = 71/188 (37%), Positives = 112/188 (59%), Gaps = 2/188 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY+RL +FL KKGF M K + L+ TKE +L+ YVDDII N L +EF
Sbjct: 327 RAWYERLSKFLLKKGFKMGKIDTTLFIKTKEND--MLLVQIYVDDIIFGATNVSLCEEFS 384
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIE-- 356
+ EFE++ +G+ ++LG +I++ ++Q Y IL+ ++ ++ + P+
Sbjct: 385 KCMHSEFEMSMMGELNFFLGLKIKQLKEGTFINQAKYIRDILKRFNMEEAKTMKTPMSSS 444
Query: 357 LGFDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
+ FD ++ K V+ Y+ +I SLLYLT +RPDI ++VC ARF PKE+HL+A K++
Sbjct: 445 IKFDKDEKGKSVNSTMYKGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLSAIKQIL 504
Query: 537 QYLVDKID 560
+YL +D
Sbjct: 505 RYLKGTMD 512
Score = 32.3 bits (72), Expect(2) = 3e-31
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 604 GVKIKKNDNFNFEVYTDSDFANDPIKRKSTTG 699
G+ K DNF ++D+DFA ++RKST+G
Sbjct: 514 GLWYPKGDNFELIGFSDADFAGCKVERKSTSG 545
>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
Length = 1505
Score = 128 bits (321), Expect(2) = 4e-31
Identities = 63/185 (34%), Positives = 109/185 (58%), Gaps = 4/185 (2%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R W++R +F+K +G++ ++ + + ++ G+ +L YVDDII+TGD+ + K
Sbjct: 1148 RAWFERFTQFVKNQGYVQAQ-SDHTMFIKHSNDGKIAILIVYVDDIILTGDHVTEMDRLK 1206
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIE-- 356
L +EFEI +LG +Y+LG ++ + + + Q+ Y +L+ G+ P PI+
Sbjct: 1207 KSLALEFEIKDLGSLRYFLGMEVARSKRGIVVSQRKYILDLLKETGMSGCRPADTPIDPN 1266
Query: 357 --LGFDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKR 530
LG ++ N V+ YQ ++ L+YL++TRPDI FAV +++FMH+P E HL A R
Sbjct: 1267 QKLGDTNDGN--LVNTTRYQKLVGKLIYLSHTRPDIAFAVSIVSQFMHSPYEVHLEAVYR 1324
Query: 531 VCQYL 545
+ +YL
Sbjct: 1325 ILRYL 1329
Score = 33.5 bits (75), Expect(2) = 4e-31
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 604 GVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGY 702
G+ KK++ E YTD+D+A R+ST+GY
Sbjct: 1336 GLFFKKSEQKTIEAYTDADWAGSVTDRRSTSGY 1368
>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
Length = 1187
Score = 132 bits (332), Expect(2) = 7e-31
Identities = 69/183 (37%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY R+ + K+GF L ++ E G+ ++++ YVDD I TG++ +I++FK
Sbjct: 830 RAWYSRIEGYFVKEGFERCSYEHTL-FVKIEGEGKMLIVSLYVDDQIFTGNDMSMIEKFK 888
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+ EFE+T+LG+ KY+LG +I + + + L Q Y ++E G+ S P + PI G
Sbjct: 889 SSMMHEFEMTDLGEMKYFLGVEIRQSAEGIHLCQSKYAREVIERFGMGKSNPVRNPIVPG 948
Query: 363 --FDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
VD ++ ++ SL+YLT TRPD+ + VC ++RFM +P+EAHL+AAKRV
Sbjct: 949 SKLSMEAGGAVVDGTLFKQLVGSLMYLTATRPDLIYVVCLISRFMAHPREAHLSAAKRVL 1008
Query: 537 QYL 545
+YL
Sbjct: 1009 RYL 1011
Score = 28.5 bits (62), Expect(2) = 7e-31
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 595 TNYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGYL 705
T GV ++ + YTDSD+A D ++ST+G++
Sbjct: 1015 TELGVFYRRGVDDELVGYTDSDYAGDMDGKRSTSGFV 1051
>emb|CAN65603.1| hypothetical protein VITISV_021511 [Vitis vinifera]
Length = 491
Score = 126 bits (316), Expect(2) = 7e-31
Identities = 63/185 (34%), Positives = 107/185 (57%), Gaps = 4/185 (2%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R W++RL +F+K +G+ ++ + + ++ G+ +L YVDDII+TGD+ + K
Sbjct: 134 RAWFERLTQFVKNQGYFQAQ-SDHTMFIKHSNDGKIAILIVYVDDIILTGDHVTEMDRLK 192
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIE-- 356
L +EFEI +LG +Y+LG ++ + + + Q+ Y +L+ G+ P PI+
Sbjct: 193 KSLALEFEIKDLGSLRYFLGMEVARSKRGIVVSQRKYILDLLKETGMSGCRPADTPIDPN 252
Query: 357 --LGFDSNKNEKKVDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKR 530
LG ++ N V+ YQ ++ L+YL +TRPDI FAV +++FMH+P E H A R
Sbjct: 253 QKLGDTNDGN--LVNTTRYQKLVGKLIYLCHTRPDIAFAVSIVSQFMHSPYEVHFEAVYR 310
Query: 531 VCQYL 545
+ +YL
Sbjct: 311 ILRYL 315
Score = 34.7 bits (78), Expect(2) = 7e-31
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 604 GVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGY 702
G+ KK++ E YT++D+A I RKST+GY
Sbjct: 322 GLFFKKSEQKTIEAYTNADWAGSVIDRKSTSGY 354
>gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1140
Score = 130 bits (327), Expect(2) = 9e-31
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 RTWYKRLIEFLKKKGFIMSK*NPNLWYLTKEESGRSILLAFYVDDIIITGDNSELIKEFK 182
R WY R+ +L GF S L+ + + +L++ YVDD+++TG +++ IK+FK
Sbjct: 782 RAWYARIDSYLLNLGFKRSCNETTLYIRLQNDD--FLLVSLYVDDLLVTGSSTQSIKDFK 839
Query: 183 DELGIEFEITNLGKAKYYLGFQIEKDSNFLKLHQKYYTEHILEIMGLQNSEPKQVPIELG 362
+++ FE+ +LGK Y+LG ++ + S + + QK Y IL+ L +P P G
Sbjct: 840 EQMKKVFEMNDLGKMTYFLGMEVNQSSQGIFVSQKKYATEILKKFCLDKCKPVSTPAVQG 899
Query: 363 FDSNKNEKK--VDVKNYQNIIRSLLYLTNTRPDIHFAVCFLARFMHNPKEAHLNAAKRVC 536
K ++ VD Y+++I SLLYL+ TRPDI +A L+RFMH P + HL AAKR+
Sbjct: 900 EKLMKEDESGLVDASIYRSLIGSLLYLSATRPDIMYATSVLSRFMHLPTKTHLKAAKRIL 959
Query: 537 QYLVDKIDY 563
+Y+ IDY
Sbjct: 960 RYIRGTIDY 968
Score = 30.0 bits (66), Expect(2) = 9e-31
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 598 NYGVKIKKNDNFNFEVYTDSDFANDPIKRKSTTGY 702
+YGV K+ + +TDSD+A KST+GY
Sbjct: 967 DYGVFYKRTTSMKLLGFTDSDWAGSQDDMKSTSGY 1001