BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025239
         (412 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78890.1| hypothetical protein (mitochondrion) [Vicia faba]...    89   6e-16
ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...    89   6e-16
ref|WP_003413878.1| conserved hypothetical protein, partial [Clo...    59   9e-07
ref|WP_003413908.1| hypothetical protein [Clostridium butyricum]...    59   9e-07
ref|WP_003415621.1| hypothetical protein [Clostridium butyricum]...    58   1e-06
ref|WP_007264782.1| conserved hypothetical protein, partial [Str...    39   2e-06
ref|WP_003413978.1| hypothetical protein [Clostridium butyricum]...    57   3e-06
ref|WP_003975792.1| conserved hypothetical protein, partial [Str...    39   4e-06
ref|YP_002730925.1| hypothetical protein PERMA_1142 [Persephonel...    56   4e-06
emb|CBA31922.1| hypothetical protein Csp_D29540 [Curvibacter put...    43   6e-06

>gb|AGC78890.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803268|gb|AGC79003.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 162

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 51/83 (61%), Positives = 59/83 (71%), Gaps = 6/83 (7%)
 Frame = +2

Query: 71  TFQHRAGVRLYSTST-FAESCVFTKQSLPPGLAHASDLLPLQQLEGHPLSRSYGVILPSS 247
           TFQHRAGVRLY++    AESCVF KQSLPPG+       P Q++  HP SRSYGVILPSS
Sbjct: 64  TFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCR----FPNQKIGEHPFSRSYGVILPSS 119

Query: 248 FNMVISSAKVH-PCR----WGTV 301
           F+MV+SSA V+  C     WGTV
Sbjct: 120 FDMVLSSALVYSTCSPVSVWGTV 142


>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355477403|gb|AES58606.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 1106

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 51/83 (61%), Positives = 59/83 (71%), Gaps = 6/83 (7%)
 Frame = +2

Query: 71  TFQHRAGVRLYSTST-FAESCVFTKQSLPPGLAHASDLLPLQQLEGHPLSRSYGVILPSS 247
           TFQHRAGVRLY++    AESCVF KQSLPPG+       P Q++  HP SRSYGVILPSS
Sbjct: 581 TFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCR----FPNQKIGEHPFSRSYGVILPSS 636

Query: 248 FNMVISSAKVH-PCR----WGTV 301
           F+MV+SSA V+  C     WGTV
Sbjct: 637 FDMVLSSALVYSTCSPVSVWGTV 659


>ref|WP_003413878.1| conserved hypothetical protein, partial [Clostridium butyricum]
           gi|237658383|gb|EEP55936.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 158

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +2

Query: 62  FRSTFQHRAGVRLYSTS-TFAESCVFTKQSLPPGLAHASDLLPLQQLEGHPLSRSYGVIL 238
           F  TFQHRAGV  Y+++   AE+CVF KQ L P L      LP+ +   HP SRSYGV L
Sbjct: 2   FPLTFQHRAGVSPYTSAYALAETCVFVKQLLVPILCG----LPIGR---HPFSRSYGVNL 54

Query: 239 PSSFNMVISSA 271
           PSS  +++ SA
Sbjct: 55  PSSLTVILPSA 65


>ref|WP_003413908.1| hypothetical protein [Clostridium butyricum]
           gi|237654820|gb|EEP52383.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
           gi|237654866|gb|EEP52428.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
           gi|237654907|gb|EEP52468.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
           gi|237655038|gb|EEP52597.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
           gi|237657969|gb|EEP55524.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
           gi|237658190|gb|EEP55744.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 162

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +2

Query: 62  FRSTFQHRAGVRLYSTS-TFAESCVFTKQSLPPGLAHASDLLPLQQLEGHPLSRSYGVIL 238
           F  TFQHRAGV  Y+++   AE+CVF KQ L P L      LP+ +   HP SRSYGV L
Sbjct: 2   FPLTFQHRAGVSPYTSAYALAETCVFVKQLLVPILCG----LPIGR---HPFSRSYGVNL 54

Query: 239 PSSFNMVISSA 271
           PSS  +++ SA
Sbjct: 55  PSSLTVILPSA 65


>ref|WP_003415621.1| hypothetical protein [Clostridium butyricum]
           gi|237657484|gb|EEP55040.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 162

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +2

Query: 62  FRSTFQHRAGVRLYSTS-TFAESCVFTKQSLPPGLAHASDLLPLQQLEGHPLSRSYGVIL 238
           F  TFQHRAGV  Y+++   AE+CVF KQ L P L      LP  +   HP SRSYGV L
Sbjct: 2   FPLTFQHRAGVSPYTSAYALAETCVFVKQLLVPILCG----LPFGR---HPFSRSYGVNL 54

Query: 239 PSSFNMVISSA 271
           PSS  +++ SA
Sbjct: 55  PSSLTVILPSA 65


>ref|WP_007264782.1| conserved hypothetical protein, partial [Streptomyces sp. C]
           gi|302444022|gb|EFL15838.1| LOW QUALITY PROTEIN:
           conserved hypothetical protein [Streptomyces sp. C]
           gi|302444668|gb|EFL16484.1| LOW QUALITY PROTEIN:
           conserved hypothetical protein [Streptomyces sp. C]
          Length = 81

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +2

Query: 59  PFRSTFQHRAGVRLYSTST-FAESCVFTKQSLPPGL 163
           P   TFQHRAGV  Y++   FA +CVF+KQSL  GL
Sbjct: 1   PVPLTFQHRAGVSPYTSPYGFARTCVFSKQSLLAGL 36



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = +1

Query: 199 GRAPLIPKLRGHFA*FLQHGYLKRQG 276
           G APL+PKLRGHFA FL H   +R G
Sbjct: 50  GMAPLLPKLRGHFAEFLNHSSPERLG 75


>ref|WP_003413978.1| hypothetical protein [Clostridium butyricum]
           gi|237654859|gb|EEP52421.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
           gi|237657713|gb|EEP55268.1| conserved hypothetical
           protein [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 162

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +2

Query: 62  FRSTFQHRAGVRLYSTS-TFAESCVFTKQSLPPGLAHASDLLPLQQLEGHPLSRSYGVIL 238
           F  TFQHRAGV  Y+++   AE+CVF KQ L P L      LP  +   HP SRSYGV L
Sbjct: 2   FPLTFQHRAGVSPYTSAYALAETCVFVKQLLVPILCG----LPNGR---HPFSRSYGVNL 54

Query: 239 PSSFNMVISSA 271
           PSS  +++ SA
Sbjct: 55  PSSLTVILPSA 65


>ref|WP_003975792.1| conserved hypothetical protein, partial [Streptomyces lividans]
           gi|289701449|gb|EFD68878.1| LOW QUALITY PROTEIN:
           conserved hypothetical protein [Streptomyces lividans
           TK24] gi|289703099|gb|EFD70528.1| LOW QUALITY PROTEIN:
           conserved hypothetical protein [Streptomyces lividans
           TK24]
          Length = 81

 Score = 39.3 bits (90), Expect(2) = 4e-06
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +2

Query: 59  PFRSTFQHRAGVRLYSTST-FAESCVFTKQSLPPGL 163
           P   TFQHRAGV  Y++   FA +CVF+KQSL  GL
Sbjct: 1   PVPLTFQHRAGVSPYTSPYGFARTCVFSKQSLLAGL 36



 Score = 37.0 bits (84), Expect(2) = 4e-06
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = +1

Query: 199 GRAPLIPKLRGHFA*FLQHGYLKRQG 276
           G APL+PKLRGHFA FL H   +R G
Sbjct: 50  GVAPLLPKLRGHFAEFLNHSSPERLG 75


>ref|YP_002730925.1| hypothetical protein PERMA_1142 [Persephonella marina EX-H1]
           gi|225851462|ref|YP_002731696.1| hypothetical protein
           PERMA_1936 [Persephonella marina EX-H1]
           gi|501942421|ref|WP_012676413.1| hypothetical protein
           [Persephonella marina] gi|225645989|gb|ACO04175.1|
           conserved hypothetical protein [Persephonella marina
           EX-H1] gi|225646335|gb|ACO04521.1| conserved
           hypothetical protein [Persephonella marina EX-H1]
          Length = 189

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/78 (48%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
 Frame = +2

Query: 53  PLPFRSTFQHRAGVRLYSTS-TFAESCVFTKQSLPPGLAHASDLLPLQQLEG----HPLS 217
           PLP   T+ H AG   +++S  FA+ CVF KQS PPG        PL  L G    HPLS
Sbjct: 116 PLPL--TYGHWAGFTPHTSSFEFAQCCVFGKQSPPPGFCD-----PLPHLNGTACGHPLS 168

Query: 218 RSYGVILPSSFNMVISSA 271
           RSYGV LPSS   V  +A
Sbjct: 169 RSYGVNLPSSLRRVTPTA 186


>emb|CBA31922.1| hypothetical protein Csp_D29540 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 156

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 24/44 (54%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 59  PFRSTFQHRAGVRLY-STSTFAESCVFTKQSLPPGLAHASDLLP 187
           P    FQHRAGV  Y ST  FAE CVF KQS PP   +   L P
Sbjct: 83  PHHLIFQHRAGVTPYTSTFVFAECCVFNKQSQPPIFCNLIGLHP 126



 Score = 32.7 bits (73), Expect(2) = 6e-06
 Identities = 16/24 (66%), Positives = 16/24 (66%)
 Frame = +3

Query: 201 KGTPYPEVTGSFCLVPSTWLSQAP 272
           KGTP  EVT S C VPS   SQAP
Sbjct: 133 KGTPSSEVTVSICRVPSPEFSQAP 156