BLASTX nr result
ID: Ephedra27_contig00025209
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00025209
(621 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527981.1| conserved hypothetical protein [Ricinus comm... 65 1e-08
gb|EOY29156.1| Myosin heavy chain-related [Theobroma cacao] 62 1e-07
ref|XP_006294102.1| hypothetical protein CARUB_v10023095mg, part... 61 3e-07
ref|XP_004291234.1| PREDICTED: uncharacterized protein LOC101294... 59 8e-07
ref|XP_002332119.1| predicted protein [Populus trichocarpa] gi|5... 59 1e-06
ref|XP_002878753.1| hypothetical protein ARALYDRAFT_481296 [Arab... 59 1e-06
ref|XP_002869334.1| hypothetical protein ARALYDRAFT_491608 [Arab... 59 1e-06
ref|XP_003603582.1| hypothetical protein MTR_3g109330 [Medicago ... 58 2e-06
ref|XP_006361629.1| PREDICTED: putative protein tag-278-like iso... 58 2e-06
ref|XP_006283757.1| hypothetical protein CARUB_v10004835mg [Caps... 58 2e-06
ref|XP_004242832.1| PREDICTED: uncharacterized protein LOC101264... 58 2e-06
ref|XP_002330772.1| predicted protein [Populus trichocarpa] gi|1... 58 2e-06
ref|XP_006382186.1| DNA repair ATPase-related family protein [Po... 57 3e-06
ref|XP_006361627.1| PREDICTED: putative protein tag-278-like iso... 57 5e-06
ref|XP_006450117.1| hypothetical protein CICLE_v10008249mg [Citr... 56 7e-06
ref|NP_001242275.1| uncharacterized protein LOC100781922 precurs... 56 7e-06
ref|NP_565569.1| ATPase-related DNA repair protein [Arabidopsis ... 56 7e-06
ref|XP_006283758.1| hypothetical protein CARUB_v10004835mg [Caps... 56 9e-06
>ref|XP_002527981.1| conserved hypothetical protein [Ricinus communis]
gi|223532607|gb|EEF34393.1| conserved hypothetical
protein [Ricinus communis]
Length = 440
Score = 65.5 bits (158), Expect = 1e-08
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Frame = +3
Query: 96 AFKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWV 275
A++ KT I+ H++ +Q ++GP+ + + +P++ AT K + + L Y+
Sbjct: 290 AYEASKTAITPHVSRVQEVVGPYFQEAKKFSKPYIDQVATVTKPHVDKVRVALKPYMKQA 349
Query: 276 AIKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSI 455
Y S YH Q Q ++ L HE PL + W++AS +L I +L I
Sbjct: 350 VHAYGKFLESASTYHHQVQGTVQETLNKHELTRPLATKELIWFMASALLALPII-LLSRI 408
Query: 456 CSLV--SKANTLFQVTNLSKHHKKYKRKH 536
CS + KA + N + +K KR H
Sbjct: 409 CSAIFCKKAKKPIRHANTNHARRKAKRGH 437
>gb|EOY29156.1| Myosin heavy chain-related [Theobroma cacao]
Length = 445
Score = 62.0 bits (149), Expect = 1e-07
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Frame = +3
Query: 111 KTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWVAIKYQ 290
K+ I+ H+ +Q ++ P+ + + +P++ AT K + + ++ Y V Y
Sbjct: 297 KSAITPHIIKVQEIVDPYFQEAKKFSKPYIDQVATLAKPHVDKVRVVMKPYTKEVVNAYG 356
Query: 291 VIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSICSLV- 467
+ YH Q Q ++ L+ HE PL + W+ AS +L I +L ICS +
Sbjct: 357 KFLELATTYHHQVQASVREMLKKHELTRPLATKELEWFAASALLALPII-ILFRICSAIF 415
Query: 468 -SKANTLFQVTNLSKHHKKYKRKH 536
KA + N ++ +K KR H
Sbjct: 416 CKKAKKPVRHANTNQGRRKAKRGH 439
>ref|XP_006294102.1| hypothetical protein CARUB_v10023095mg, partial [Capsella rubella]
gi|482562810|gb|EOA27000.1| hypothetical protein
CARUB_v10023095mg, partial [Capsella rubella]
Length = 487
Score = 60.8 bits (146), Expect = 3e-07
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Frame = +3
Query: 96 AFKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWV 275
A+ KT ++ H+ Q + P+ + + +P+V AT K + +A + Y
Sbjct: 338 AYHASKTAVTPHIVKFQGHVDPYYQEAKKFSKPYVDQVATATKPHVDKVRATMKPYTKKA 397
Query: 276 AIKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSI 455
Y+ + S YH Q Q + L+SHE + P W+ AS +L IF V +
Sbjct: 398 IHFYKEFLKSASTYHHQLQANVESKLKSHELLEPFATKEFIWFTASALLALPIFIVYRFL 457
Query: 456 CSLVSKANTLFQVTNLSKHH---KKYKRKHN 539
CSLV T + + HH +K KR H+
Sbjct: 458 CSLVC---TKTKKPSRQPHHNTRRKAKRGHS 485
>ref|XP_004291234.1| PREDICTED: uncharacterized protein LOC101294037 [Fragaria vesca
subsp. vesca]
Length = 443
Score = 59.3 bits (142), Expect = 8e-07
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Frame = +3
Query: 96 AFKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWV 275
A+K K+ ++ H+ Q + P+ + + +P+V AT K + + +L Y
Sbjct: 295 AYKTSKSTLAPHVIKAQECVDPYFQEAKRFSKPYVDQVATVAKPHVEKVRVVLKPYTKQA 354
Query: 276 AIKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLG---SVIFCVL 446
Y+ + S YH Q Q ++ L+ HE PL + W+ AS +L ++F VL
Sbjct: 355 VQAYEKFLKSASTYHHQVQTIVREKLKKHELTRPLATKELEWFAASALLALPILILFRVL 414
Query: 447 LSICSLVSKANTLFQVTNLSKHHKKYKRK 533
S+ SK S HH + K K
Sbjct: 415 SSLFCTKSKKPV------RSTHHSRRKAK 437
>ref|XP_002332119.1| predicted protein [Populus trichocarpa]
gi|566214115|ref|XP_006371817.1| DNA repair
ATPase-related family protein [Populus trichocarpa]
gi|118488228|gb|ABK95933.1| unknown [Populus
trichocarpa] gi|550317990|gb|ERP49614.1| DNA repair
ATPase-related family protein [Populus trichocarpa]
Length = 447
Score = 58.9 bits (141), Expect = 1e-06
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Frame = +3
Query: 99 FKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWVA 278
++ KT ++ H+ +Q + P+ + + +P++ AT K + K L Y
Sbjct: 298 YEASKTTVTPHIIRVQEIADPYFQEAKKFSKPYIDQVATMTKPHVDKVKVALKPYTKEAV 357
Query: 279 IKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSIC 458
Y + YH Q QV ++ L+ HE PL + + W++AS +L + +L C
Sbjct: 358 HAYGKFLESATTYHNQVQVTVQETLEKHELTKPLAMKELIWFIASALLALPVI-ILARAC 416
Query: 459 SLV--SKANTLFQVTNLSKHHKKYKRKHN 539
S + KA + + + +K KR H+
Sbjct: 417 SSIFCQKAKKPARNAHANPSRRKAKRGHS 445
>ref|XP_002878753.1| hypothetical protein ARALYDRAFT_481296 [Arabidopsis lyrata subsp.
lyrata] gi|297324592|gb|EFH55012.1| hypothetical protein
ARALYDRAFT_481296 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 58.5 bits (140), Expect = 1e-06
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Frame = +3
Query: 96 AFKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWV 275
A+ K+ ++ H+ Q + P+ + + +P+V AT K + +A + Y
Sbjct: 291 AYHASKSAVTPHIVKFQEHVDPYYQEAKKFSKPYVDQVATATKPHVDKVRATIKPYTKKT 350
Query: 276 AIKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSI 455
Y+ S YH Q Q + L+SHE + P +W+ AS +L IF V +
Sbjct: 351 IHYYKEFLESASTYHHQLQANVETKLKSHELMEPFATKEFTWFAASALLALPIFIVYKFL 410
Query: 456 CSLVSKANTLFQVTNLSKHH--KKYKRKHN 539
CSL + T HH +K KR H+
Sbjct: 411 CSLFCTKTK--KPTRQPHHHTRRKAKRGHS 438
>ref|XP_002869334.1| hypothetical protein ARALYDRAFT_491608 [Arabidopsis lyrata subsp.
lyrata] gi|297315170|gb|EFH45593.1| hypothetical protein
ARALYDRAFT_491608 [Arabidopsis lyrata subsp. lyrata]
Length = 420
Score = 58.5 bits (140), Expect = 1e-06
Identities = 35/133 (26%), Positives = 57/133 (42%)
Frame = +3
Query: 66 VREIDDLVNIAFKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTK 245
VR + A+ K+ +S H+ +Q + P+ + + +P+V AT K + K
Sbjct: 278 VRTLSIKAKEAYHASKSAVSPHIATVQEFVDPYYQEAKKFSKPYVDQVATTTKPHVDKMK 337
Query: 246 AILSQYIAWVAIKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLG 425
+ Y V I Y + YH Q Q ++ L+ HE P + W+ AS +L
Sbjct: 338 VAMKPYTTKVIIVYTEFLESATTYHHQVQAHIERKLKDHELTEPFATNEFVWFAASALLV 397
Query: 426 SVIFCVLLSICSL 464
IF +CSL
Sbjct: 398 FPIFVAYKVLCSL 410
>ref|XP_003603582.1| hypothetical protein MTR_3g109330 [Medicago truncatula]
gi|355492630|gb|AES73833.1| hypothetical protein
MTR_3g109330 [Medicago truncatula]
gi|388509130|gb|AFK42631.1| unknown [Medicago
truncatula]
Length = 439
Score = 58.2 bits (139), Expect = 2e-06
Identities = 33/145 (22%), Positives = 61/145 (42%)
Frame = +3
Query: 99 FKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWVA 278
+K K ++ HLN + + P+ + R +P++ AT K + + + +L Y V
Sbjct: 289 YKSSKDALAPHLNKAKECVDPYYQEARKFSKPYIDQVATAAKPHVENVQVVLKPYTKKVV 348
Query: 279 IKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSIC 458
+ Y + YH Q Q ++ L+ HE PL + W+ AS +L I +
Sbjct: 349 LAYGNFLESATAYHRQVQATVQETLKKHELTRPLATKELEWFAASALLALPIILIARVFS 408
Query: 459 SLVSKANTLFQVTNLSKHHKKYKRK 533
++ + + HH + K K
Sbjct: 409 AIFCSKKASKPARSGNTHHARRKAK 433
>ref|XP_006361629.1| PREDICTED: putative protein tag-278-like isoform X3 [Solanum
tuberosum]
Length = 442
Score = 57.8 bits (138), Expect = 2e-06
Identities = 37/141 (26%), Positives = 65/141 (46%)
Frame = +3
Query: 111 KTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWVAIKYQ 290
K F+ H+ N Q ++ P++K R V P+V + +K I + + Y V Y+
Sbjct: 297 KKFMEPHIVNAQEVIQPYVKEVRKVADPYVDQVSLVMKPHIDKARILSQPYTKKVHRHYR 356
Query: 291 VIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSICSLVS 470
+++ +S YH Q Q L++H P ++WYLAS +L + +L +LVS
Sbjct: 357 KVKKTVSLYHHQAQENIHHMLKNHHITKPYATKELAWYLASALLALPVIFLL----NLVS 412
Query: 471 KANTLFQVTNLSKHHKKYKRK 533
+ +HH + R+
Sbjct: 413 DFRRKKPKKHSHRHHTSHTRR 433
>ref|XP_006283757.1| hypothetical protein CARUB_v10004835mg [Capsella rubella]
gi|482552462|gb|EOA16655.1| hypothetical protein
CARUB_v10004835mg [Capsella rubella]
Length = 437
Score = 57.8 bits (138), Expect = 2e-06
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Frame = +3
Query: 66 VREIDDLVNIAFKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTK 245
VR + + K+ +S H+ +Q + P+ + + +P+V AT K + K
Sbjct: 278 VRTLSIKAKETYHASKSAVSPHIVTVQEFVDPYYQEAKKFSKPYVDQVATTTKPHVDKIK 337
Query: 246 AILSQYIAWVAIKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLG 425
+ Y V I Y + YH Q Q ++ L++HE P + W+ AS +L
Sbjct: 338 VAMKPYTTKVIIVYTEFLESATTYHHQVQAHVERKLKNHELTEPFATNEFVWFAASALLA 397
Query: 426 SVIFCVLLSICSLVSKANTLFQVTNLSKH-HKKYKRKH 536
+F +CSL T V + H +K KR H
Sbjct: 398 LPVFIAYRVLCSLFC-TKTKKPVKHPHHHGRRKAKRGH 434
>ref|XP_004242832.1| PREDICTED: uncharacterized protein LOC101264025 [Solanum
lycopersicum]
Length = 437
Score = 57.8 bits (138), Expect = 2e-06
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +3
Query: 111 KTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWVAIKYQ 290
K F+ H+ N Q ++ P++K R V P+V + +K I + +L Y V Y+
Sbjct: 291 KKFMEPHIMNAQEVIQPYVKEVRKVADPYVDQVSLVMKPHIDKARILLQPYTKRVHRHYR 350
Query: 291 VIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLG-SVIFCVLLSICSLV 467
++ +S YH Q Q L++H P ++WYLAS +L VIF LL++ S
Sbjct: 351 KAKKTVSLYHHQAQENIHHMLKNHHITKPYATKELAWYLASALLALPVIF--LLNLVSDF 408
Query: 468 SKANTLFQVTNLSKHHKKYKRKHN 539
+ SK KK+ +H+
Sbjct: 409 GR----------SKKPKKHSHRHH 422
>ref|XP_002330772.1| predicted protein [Populus trichocarpa] gi|118485922|gb|ABK94806.1|
unknown [Populus trichocarpa]
Length = 446
Score = 57.8 bits (138), Expect = 2e-06
Identities = 36/145 (24%), Positives = 62/145 (42%)
Frame = +3
Query: 99 FKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWVA 278
++ KT I+AH+ +Q ++ P + + P++ AT K + + +L Y
Sbjct: 297 YEASKTTITAHIIRVQEIVDPCFQEAKKFSEPYIDQVATVTKPHVDKVRVVLKPYTKEAV 356
Query: 279 IKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSIC 458
Y + YH Q Q ++ L+ HE PL W++AS + IF +L +C
Sbjct: 357 DAYGKFLESATTYHNQVQSTVQETLEKHELTKPLATKDSIWFIASALFTLPIF-ILARVC 415
Query: 459 SLVSKANTLFQVTNLSKHHKKYKRK 533
S + + V N H + K K
Sbjct: 416 SSIFCKKSKKPVRNAQTSHSRRKAK 440
>ref|XP_006382186.1| DNA repair ATPase-related family protein [Populus trichocarpa]
gi|566178754|ref|XP_006382187.1| hypothetical protein
POPTR_0006s29170g [Populus trichocarpa]
gi|550337341|gb|ERP59983.1| DNA repair ATPase-related
family protein [Populus trichocarpa]
gi|550337342|gb|ERP59984.1| hypothetical protein
POPTR_0006s29170g [Populus trichocarpa]
Length = 446
Score = 57.4 bits (137), Expect = 3e-06
Identities = 36/145 (24%), Positives = 62/145 (42%)
Frame = +3
Query: 99 FKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWVA 278
++ KT I+AH+ +Q ++ P + + P++ AT K + + +L Y
Sbjct: 297 YEASKTTITAHIIRVQEIVDPCFQEAKKFSEPYIDQVATVTKPHVDKVRVVLKPYTKEAV 356
Query: 279 IKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSIC 458
Y + YH Q Q ++ L+ HE PL W++AS + IF +L +C
Sbjct: 357 DAYGKFLESATTYHNQVQGTVQETLEKHELTKPLATKDSIWFIASALFTLPIF-ILARVC 415
Query: 459 SLVSKANTLFQVTNLSKHHKKYKRK 533
S + + V N H + K K
Sbjct: 416 SSIFCKKSKKPVRNAQTSHSRRKAK 440
>ref|XP_006361627.1| PREDICTED: putative protein tag-278-like isoform X1 [Solanum
tuberosum] gi|565391859|ref|XP_006361628.1| PREDICTED:
putative protein tag-278-like isoform X2 [Solanum
tuberosum]
Length = 443
Score = 56.6 bits (135), Expect = 5e-06
Identities = 39/143 (27%), Positives = 66/143 (46%)
Frame = +3
Query: 111 KTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWVAIKYQ 290
K F+ H+ N Q ++ P++K R V P+V + +K I + + Y V Y+
Sbjct: 297 KKFMEPHIVNAQEVIQPYVKEVRKVADPYVDQVSLVMKPHIDKARILSQPYTKKVHRHYR 356
Query: 291 VIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSICSLVS 470
+++ +S YH Q Q L++H P ++WYLAS +L + +L +LVS
Sbjct: 357 KVKKTVSLYHHQAQENIHHMLKNHHITKPYATKELAWYLASALLALPVIFLL----NLVS 412
Query: 471 KANTLFQVTNLSKHHKKYKRKHN 539
SK KK+ +H+
Sbjct: 413 DFRR-------SKKPKKHSHRHH 428
>ref|XP_006450117.1| hypothetical protein CICLE_v10008249mg [Citrus clementina]
gi|567916224|ref|XP_006450118.1| hypothetical protein
CICLE_v10008249mg [Citrus clementina]
gi|568860206|ref|XP_006483616.1| PREDICTED:
uncharacterized protein PFB0145c-like [Citrus sinensis]
gi|557553343|gb|ESR63357.1| hypothetical protein
CICLE_v10008249mg [Citrus clementina]
gi|557553344|gb|ESR63358.1| hypothetical protein
CICLE_v10008249mg [Citrus clementina]
Length = 444
Score = 56.2 bits (134), Expect = 7e-06
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Frame = +3
Query: 96 AFKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWV 275
A + KT ++ H+ +Q ++ P+ + + +P++ AT K + + + L Y V
Sbjct: 295 ACEATKTAVTPHIIRVQEVVDPYFQEAKKFSKPYIDQVATVAKPHVDNVRVALKPYTKKV 354
Query: 276 AIKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVL----------G 425
Y + + YH Q Q ++ L+ HE +PL + W+ AS +L G
Sbjct: 355 VRAYGKFLKSATTYHHQVQASVQEMLKKHELTSPLATKELEWFAASALLVLPVIILFRIG 414
Query: 426 SVIFC 440
S IFC
Sbjct: 415 SAIFC 419
>ref|NP_001242275.1| uncharacterized protein LOC100781922 precursor [Glycine max]
gi|255642485|gb|ACU21506.1| unknown [Glycine max]
Length = 446
Score = 56.2 bits (134), Expect = 7e-06
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Frame = +3
Query: 99 FKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWVA 278
++ K IS HL+ + + P+ + R +P++ A K + + +L Y V
Sbjct: 293 YEASKNAISPHLSKAKEFVDPYYQEARKFSKPYIDQIAIAAKPHVDKVQVVLKPYTKEVV 352
Query: 279 IKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSIC 458
Y + YH Q Q ++ L+ HE PL + W+ AS +L I V
Sbjct: 353 RTYGKFLESATTYHRQVQASVQETLKKHELTRPLATKELEWFAASALLALPIILVARVFS 412
Query: 459 SLVSKANTLFQVTNLSKHH--KKYKRKH 536
++ N + HH +K+KR H
Sbjct: 413 AVFCSKKVNKPARNGNNHHARRKHKRGH 440
>ref|NP_565569.1| ATPase-related DNA repair protein [Arabidopsis thaliana]
gi|30682410|ref|NP_850053.1| ATPase-related DNA repair
protein [Arabidopsis thaliana]
gi|16930417|gb|AAL31894.1|AF419562_1 At2g24420/T28I24.15
[Arabidopsis thaliana] gi|20197763|gb|AAD18124.2|
expressed protein [Arabidopsis thaliana]
gi|33589746|gb|AAQ22639.1| At2g24420/T28I24.15
[Arabidopsis thaliana] gi|222422823|dbj|BAH19399.1|
AT2G24420 [Arabidopsis thaliana]
gi|330252480|gb|AEC07574.1| ATPase-related DNA repair
protein [Arabidopsis thaliana]
gi|330252481|gb|AEC07575.1| ATPase-related DNA repair
protein [Arabidopsis thaliana]
Length = 440
Score = 56.2 bits (134), Expect = 7e-06
Identities = 33/123 (26%), Positives = 54/123 (43%)
Frame = +3
Query: 96 AFKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTKAILSQYIAWV 275
A+ K+ ++ H+ Q + P+ + + +P+V AT K + +A + Y
Sbjct: 291 AYHASKSAVTPHIVKFQEHVDPYYQEAKKFSKPYVDQVATATKPHVDKVRATMKPYTTKT 350
Query: 276 AIKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLGSVIFCVLLSI 455
Y+ S YH Q Q + L+SHE + P W+ AS +L IF V +
Sbjct: 351 VHYYKEFLESASTYHHQLQANVESKLKSHELLEPFATKEFIWFAASALLALPIFIVYKFL 410
Query: 456 CSL 464
CSL
Sbjct: 411 CSL 413
>ref|XP_006283758.1| hypothetical protein CARUB_v10004835mg [Capsella rubella]
gi|482552463|gb|EOA16656.1| hypothetical protein
CARUB_v10004835mg [Capsella rubella]
Length = 434
Score = 55.8 bits (133), Expect = 9e-06
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Frame = +3
Query: 66 VREIDDLVNIAFKPLKTFISAHLNNIQILMGPHLKAFRDVMRPWVKSSATFVKLLIFDTK 245
VR + + K+ +S H+ +Q + P+ +A + +P+V AT K + K
Sbjct: 276 VRTLSIKAKETYHASKSAVSPHIVTVQEFVDPYYQA-KKFSKPYVDQVATTTKPHVDKIK 334
Query: 246 AILSQYIAWVAIKYQVIQRCISHYHVQFQVFFKQALQSHEHITPLPVDMISWYLASTVLG 425
+ Y V I Y + YH Q Q ++ L++HE P + W+ AS +L
Sbjct: 335 VAMKPYTTKVIIVYTEFLESATTYHHQVQAHVERKLKNHELTEPFATNEFVWFAASALLA 394
Query: 426 SVIFCVLLSICSLVSKANTLFQVTNLSKH-HKKYKRKH 536
+F +CSL T V + H +K KR H
Sbjct: 395 LPVFIAYRVLCSLFC-TKTKKPVKHPHHHGRRKAKRGH 431