BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00025051
         (1149 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845699.1| hypothetical protein AMTR_s00019p00238660 [A...   271   3e-70
ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containi...   256   2e-65
ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citr...   256   2e-65
ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containi...   253   1e-64
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   251   4e-64
ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containi...   250   7e-64
ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containi...   249   2e-63
gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protei...   248   4e-63
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...   247   7e-63
gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]     244   4e-62
gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus...   244   4e-62
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu...   243   1e-61
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps...   243   1e-61
ref|NP_564110.1| pentatricopeptide repeat-containing protein [Ar...   242   2e-61
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ...   240   9e-61
ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi...   237   8e-60
ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containi...   235   3e-59
ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containi...   235   3e-59
ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutr...   234   4e-59
emb|CBI18917.3| unnamed protein product [Vitis vinifera]              233   1e-58

>ref|XP_006845699.1| hypothetical protein AMTR_s00019p00238660 [Amborella trichopoda]
            gi|548848271|gb|ERN07374.1| hypothetical protein
            AMTR_s00019p00238660 [Amborella trichopoda]
          Length = 534

 Score =  271 bits (694), Expect = 3e-70
 Identities = 128/275 (46%), Positives = 180/275 (65%)
 Frame = +2

Query: 8    YNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEML 187
            Y  LM GW   +++  A  V  E+K  G +PN  +YT +I+ LC  G+V  A+++F EM+
Sbjct: 255  YTTLMYGWCRVYNIEEAERVFKEMKENGFQPNVYTYTIVIDALCRAGQVNRAYDMFREMV 314

Query: 188  GANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQ 367
             ANC PN  T NA +R+ VK  E+ +  +V +Q K+ G  PDV  Y  LI+  C+     
Sbjct: 315  NANCAPNAATFNALMRIHVKANEIEKVSQVYNQMKRMGCDPDVIAYNFLIEAHCRDDNLD 374

Query: 368  DAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLM 547
              +K L++MI +G  PN S+FN +F+  + L DV GA+RLF+RM+  GC P+T TYN+LM
Sbjct: 375  KGLKVLNQMISKGCNPNASSFNLLFQCISKLKDVNGAHRLFSRMKDLGCQPNTITYNILM 434

Query: 548  RLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGI 727
            R+F+++KSTDMV++L++EMD  GCEP+VNTY +LI  FC  GHWN  YK  +EM EEK +
Sbjct: 435  RMFSESKSTDMVIKLKKEMDKNGCEPNVNTYRVLISTFCGIGHWNQGYKFFKEMMEEKCL 494

Query: 728  PPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
             PT  +Y+M+LE L+ A E  K EELV+ M   GF
Sbjct: 495  RPTLPVYKMLLEQLRKAGEIKKHEELVEMMTEKGF 529


>ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Citrus sinensis]
          Length = 538

 Score =  256 bits (653), Expect = 2e-65
 Identities = 127/277 (45%), Positives = 177/277 (63%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y NL+RGW  A ++  A  V  E+K  G++PN  +Y+ +I+ LC  G++  A +VF EM
Sbjct: 258  VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 317

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            L   C PN  T N  +RV VK     +  +V +Q K+ G   D  TY  LI   CK GK 
Sbjct: 318  LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 377

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            +DA+K L+ M+ +G  PN S FN IF   + L DV GA+R++ +M+   C+P+T TYN+L
Sbjct: 378  EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 437

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            M++FA +KSTDMV++L++EM+    EP+VNTY ILI M+C  GHWN AYK IREM EEK 
Sbjct: 438  MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 497

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGFS 835
            + P   +Y MVL+ L+ A +  K EELV+KM   GF+
Sbjct: 498  LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 534



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 37/264 (14%)
 Frame = +2

Query: 146 GKVKD---AWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRG----- 301
           GKV+    AW+    M   N    VDT +  VR  V+     EA    ++ ++ G     
Sbjct: 163 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 222

Query: 302 -----------------------------LMPDVTTYELLIQGCCKLGKWQDAMKQLDEM 394
                                          PDV  Y  L++G C+ G   +A +   EM
Sbjct: 223 IAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 282

Query: 395 IGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKST 574
              G+ PN   ++ + +       +  A+ +F  M   GC+P++ T+N LMR+  +   T
Sbjct: 283 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 342

Query: 575 DMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRM 754
           + V+++  +M   GCE D  TY  LI   C  G    A K++  M   KG  P    + M
Sbjct: 343 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV-RKGCNPNASTFNM 401

Query: 755 VLETLQSASEFTKVEELVQKMDSL 826
           +   +    +      +  KM  L
Sbjct: 402 IFRCISKLGDVNGAHRMYGKMKDL 425



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 47/206 (22%), Positives = 88/206 (42%)
 Frame = +2

Query: 212 DTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDE 391
           D  +  + +  K  +   A+  +   K R +   V T+ +L++   + G   +A+   + 
Sbjct: 153 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 212

Query: 392 MIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKS 571
           M   G  P+  AF+ +  +         A   F+ ++    +PD   Y  L+R + +  +
Sbjct: 213 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 271

Query: 572 TDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYR 751
                R+ +EM   G +P+V TY+I+I   C  G    A+ +  EM  E G  P    + 
Sbjct: 272 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-EVGCEPNSITFN 330

Query: 752 MVLETLQSASEFTKVEELVQKMDSLG 829
            ++     AS   KV ++  +M  LG
Sbjct: 331 NLMRVHVKASRTEKVLQVYNQMKRLG 356


>ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citrus clementina]
            gi|557537379|gb|ESR48497.1| hypothetical protein
            CICLE_v10000789mg [Citrus clementina]
          Length = 541

 Score =  256 bits (653), Expect = 2e-65
 Identities = 127/277 (45%), Positives = 177/277 (63%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y NL+RGW  A ++  A  V  E+K  G++PN  +Y+ +I+ LC  G++  A +VF EM
Sbjct: 261  VYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEM 320

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            L   C PN  T N  +RV VK     +  +V +Q K+ G   D  TY  LI   CK GK 
Sbjct: 321  LEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKL 380

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            +DA+K L+ M+ +G  PN S FN IF   + L DV GA+R++ +M+   C+P+T TYN+L
Sbjct: 381  EDAIKVLNSMVRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNIL 440

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            M++FA +KSTDMV++L++EM+    EP+VNTY ILI M+C  GHWN AYK IREM EEK 
Sbjct: 441  MQMFATSKSTDMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC 500

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGFS 835
            + P   +Y MVL+ L+ A +  K EELV+KM   GF+
Sbjct: 501  LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGFT 537



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 37/264 (14%)
 Frame = +2

Query: 146 GKVKD---AWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRG----- 301
           GKV+    AW+    M   N    VDT +  VR  V+     EA    ++ ++ G     
Sbjct: 166 GKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDK 225

Query: 302 -----------------------------LMPDVTTYELLIQGCCKLGKWQDAMKQLDEM 394
                                          PDV  Y  L++G C+ G   +A +   EM
Sbjct: 226 IAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFREM 285

Query: 395 IGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKST 574
              G+ PN   ++ + +       +  A+ +F  M   GC+P++ T+N LMR+  +   T
Sbjct: 286 KMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMRVHVKASRT 345

Query: 575 DMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRM 754
           + V+++  +M   GCE D  TY  LI   C  G    A K++  M   KG  P    + M
Sbjct: 346 EKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMV-RKGCNPNASTFNM 404

Query: 755 VLETLQSASEFTKVEELVQKMDSL 826
           +   +    +      +  KM  L
Sbjct: 405 IFRCISKLGDVNGAHRMYGKMKDL 428



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 47/206 (22%), Positives = 88/206 (42%)
 Frame = +2

Query: 212 DTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDE 391
           D  +  + +  K  +   A+  +   K R +   V T+ +L++   + G   +A+   + 
Sbjct: 156 DLYHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNR 215

Query: 392 MIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKS 571
           M   G  P+  AF+ +  +         A   F+ ++    +PD   Y  L+R + +  +
Sbjct: 216 MEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 274

Query: 572 TDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYR 751
                R+ +EM   G +P+V TY+I+I   C  G    A+ +  EM  E G  P    + 
Sbjct: 275 ISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEML-EVGCEPNSITFN 333

Query: 752 MVLETLQSASEFTKVEELVQKMDSLG 829
            ++     AS   KV ++  +M  LG
Sbjct: 334 NLMRVHVKASRTEKVLQVYNQMKRLG 359


>ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Cicer arietinum]
          Length = 530

 Score =  253 bits (645), Expect = 1e-64
 Identities = 122/276 (44%), Positives = 179/276 (64%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y +L+ GW  A ++  A EV +++K  G++PN  +Y+ +I+ LC  G++  A +VF EM
Sbjct: 250  VYTSLVHGWCRAGNISKAEEVFSDMKVAGIKPNVYTYSIVIDSLCRSGQITRAHDVFSEM 309

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            + A C PN  T N+ +RV VK     +  +V +Q K+ G   D  +Y  +I+  CK    
Sbjct: 310  IDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFIIESHCKDENL 369

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
             +A+K LD M+ +G+ PN S FN IF   A L+DV GA+R++ +M+   C P+T TYN+L
Sbjct: 370  DEAVKVLDTMVKKGVDPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCRPNTLTYNIL 429

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+F  +KS DMV++L++EMD    EP+VNTY ILI MFC+ GHWN AYK+++EM EEK 
Sbjct: 430  MRMFVDSKSIDMVLKLKKEMDESQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKC 489

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
            + P   +Y MVLE L+ A +  K EELV+KM + GF
Sbjct: 490  LKPNLSIYEMVLEQLRKAGQLKKHEELVEKMVARGF 525



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 59/282 (20%), Positives = 111/282 (39%), Gaps = 35/282 (12%)
 Frame = +2

Query: 86  QGLRPNSESYTCLIEGLCGEGKVKD-AWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVR 262
           +G   + E Y  +I+ L G+ +  + AWN+   M        V T    VR  V+     
Sbjct: 138 EGFPSSPEPYNEMID-LAGKLRHFELAWNLIDLMKSRGVKITVGTFAVLVRRYVRAGLAA 196

Query: 263 EAFKVVSQFKQRGLMPDVTTYELLI----------------------------------Q 340
           EA    ++ ++ G  PD   + ++I                                   
Sbjct: 197 EAVHAFNRMEEYGCTPDKVAFSIVISSLCKKRRASEAQLFFDSLKHRFEPDVIVYTSLVH 256

Query: 341 GCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDP 520
           G C+ G    A +   +M   G+ PN   ++ + +       +  A+ +F+ M  +GCDP
Sbjct: 257 GWCRAGNISKAEEVFSDMKVAGIKPNVYTYSIVIDSLCRSGQITRAHDVFSEMIDAGCDP 316

Query: 521 DTQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKII 700
           +  T+N LMR+  +   T+ V+++  +M   GC  D  +Y  +I+  C   + + A K++
Sbjct: 317 NAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFIIESHCKDENLDEAVKVL 376

Query: 701 REMTEEKGIPPTEELYRMVLETLQSASEFTKVEELVQKMDSL 826
             M  +KG+ P    +  +   +    +      +  KM  L
Sbjct: 377 DTMV-KKGVDPNASTFNSIFGCIAELHDVNGAHRMYAKMKEL 417


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355492879|gb|AES74082.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  251 bits (641), Expect = 4e-64
 Identities = 123/276 (44%), Positives = 179/276 (64%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y +L+ GW  A D+  A EV +++K  G++PN  +Y+ +I+ LC  G++  A +VF EM
Sbjct: 249  VYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEM 308

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            + A C PN  T N+ +RV VK     +  +V +Q K+ G   D  +Y  LI+  CK    
Sbjct: 309  IDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENL 368

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
             +A+K LD M+ +G+ PN S FN IF   A L+DV GA+R++ +M+   C P+T TYN+L
Sbjct: 369  DEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNIL 428

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+FA +KS DMV++L++EMD    EP+VNTY ILI MFC+ GHWN AY +++EM EEK 
Sbjct: 429  MRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKC 488

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
            + P   +Y  VLE L++A +  K EELV+KM + GF
Sbjct: 489  LKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGF 524



 Score =  100 bits (250), Expect = 8e-19
 Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 2/275 (0%)
 Frame = +2

Query: 8   YNNL--MRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCE 181
           YN +  + G +   DL  A+ ++  +K++G+R    +++ L+      G   +A + F  
Sbjct: 146 YNEMIDLAGKLRHFDL--AWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNR 203

Query: 182 MLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGK 361
           M    C P+  + +  +  L K     EA       K +   PDV  Y  L+ G C+ G 
Sbjct: 204 MEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-FEPDVIVYTSLVHGWCRAGD 262

Query: 362 WQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNV 541
              A +   +M   G+ PN   ++ + +       +  A+ +F+ M  +GCDP+  T+N 
Sbjct: 263 IAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNS 322

Query: 542 LMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEK 721
           LMR+  +   T+ V+++  +M   GC  D  +Y  LI+  C   + + A K++  M  +K
Sbjct: 323 LMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMV-KK 381

Query: 722 GIPPTEELYRMVLETLQSASEFTKVEELVQKMDSL 826
           G+ P    +  +   +    +      +  KM  L
Sbjct: 382 GVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKEL 416



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 42/169 (24%), Positives = 73/169 (43%)
 Frame = +2

Query: 323 YELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRME 502
           Y  +I    KL  +  A   +D M  RG+    S F+ +            A   FNRME
Sbjct: 146 YNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRME 205

Query: 503 SSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWN 682
             GC PD  ++++++    + +           +  K  EPDV  YT L+  +C  G   
Sbjct: 206 DYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-FEPDVIVYTSLVHGWCRAGDIA 264

Query: 683 MAYKIIREMTEEKGIPPTEELYRMVLETLQSASEFTKVEELVQKMDSLG 829
            A ++  +M +E G+ P    Y +V+++L    + T+  ++  +M   G
Sbjct: 265 KAEEVFSDM-KEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAG 312


>ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like isoform X1 [Glycine max]
            gi|571458531|ref|XP_006581147.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like isoform X2 [Glycine max]
          Length = 564

 Score =  250 bits (639), Expect = 7e-64
 Identities = 122/276 (44%), Positives = 178/276 (64%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y +L+ GW  A D+  A EV +++K  G++PN  +Y+ +I+ LC  G++  A +VF EM
Sbjct: 284  VYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEM 343

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            + A C PN  T N+ +RV VK     +  KV +Q K+ G   D  +Y  +I+  C+    
Sbjct: 344  IDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENL 403

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            ++A K L+ M+ +G+ PN S FN IF   A L+DV GA+R++ RM+   C P+T TYN+L
Sbjct: 404  EEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNIL 463

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+FA+++STDMV+++++EMD    EP+VNTY ILI MFCD  HWN AYK++ EM EEK 
Sbjct: 464  MRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKC 523

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
            + P   +Y  VLE L+ A +  K EELV KM + GF
Sbjct: 524  LRPNLSVYETVLELLRKAGQLKKHEELVDKMVARGF 559



 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 60/281 (21%), Positives = 111/281 (39%), Gaps = 35/281 (12%)
 Frame = +2

Query: 89   GLRPNSESYTCLIEGLCGEGKVKD-AWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVRE 265
            G   + E Y  +++ L G+ +  D AW+V   M        V T +A VR  V+     E
Sbjct: 173  GFPASPEPYNEMLD-LAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAE 231

Query: 266  AFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGR-------------- 403
            A    ++ +  G  PD+  + ++I   CK  +  +A    D +  R              
Sbjct: 232  AVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHG 291

Query: 404  --------------------GLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPD 523
                                G+ PN   ++ + +       +  A+ +F+ M  +GCDP+
Sbjct: 292  WCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPN 351

Query: 524  TQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIR 703
              T+N LMR+  +   T+ V+++  +M   GC  D  +Y  +I+  C   +   A KI+ 
Sbjct: 352  AVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILN 411

Query: 704  EMTEEKGIPPTEELYRMVLETLQSASEFTKVEELVQKMDSL 826
             M  +KG+ P    +  +   +    +      +  +M  L
Sbjct: 412  LMV-KKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKEL 451


>ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 529

 Score =  249 bits (635), Expect = 2e-63
 Identities = 126/276 (45%), Positives = 176/276 (63%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            LY +L+ GW  A ++  A  V  E+KA G+ PN  SY+ +I+ LC  G++  A +VF EM
Sbjct: 247  LYTSLVNGWCRAGNIAEAERVFNEMKAAGIEPNVYSYSIVIDALCRCGQITRAHDVFAEM 306

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            + A C PN  T N  +RV VK     +  +V +Q K+ G   DV TY  LI+  CK    
Sbjct: 307  IDAGCNPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCNADVITYNFLIECHCKDENV 366

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            ++A K L+ M+ +G +PN S FN IF   A L DV GA+R++ +M+   C  +T TYNVL
Sbjct: 367  EEAAKVLNLMVKKGCSPNASTFNPIFRCIAKLKDVNGAHRMYTKMKDLDCKANTVTYNVL 426

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            M++FA++KSTDMV++L++EMD    EP+VNTY +LI M+C  GHWN AYK  REM EEK 
Sbjct: 427  MQMFAESKSTDMVLKLKKEMDENEVEPNVNTYKVLISMYCAMGHWNNAYKFFREMIEEKC 486

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
            + P+  +Y MVL+ L++A +  K EELV+KM   GF
Sbjct: 487  LKPSMPVYEMVLKQLRNAGQLKKHEELVEKMVDRGF 522



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 66/275 (24%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
 Frame = +2

Query: 8   YNNL--MRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCE 181
           YN +  + G +   DL  A+ V+  +KA+ +    E+++ L+      G   +A + F  
Sbjct: 144 YNEMVDLAGKVRQFDL--AWHVIDLMKARNVEITVETFSILVRRYVRAGLAAEAVHAFNR 201

Query: 182 MLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGK 361
           M      P+    +  + +L K     EA       K +    DV  Y  L+ G C+ G 
Sbjct: 202 MEEYGVSPDRIAFSVVIGILCKKRRASEAQAFFDSLKHK-FEADVILYTSLVNGWCRAGN 260

Query: 362 WQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNV 541
             +A +  +EM   G+ PN  +++ + +       +  A+ +F  M  +GC+P++ T+N 
Sbjct: 261 IAEAERVFNEMKAAGIEPNVYSYSIVIDALCRCGQITRAHDVFAEMIDAGCNPNSITFNN 320

Query: 542 LMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEK 721
           LMR+  +   T+ V+++  +M   GC  DV TY  LI+  C   +   A K++  M  +K
Sbjct: 321 LMRVHVKAGRTEKVLQVYNQMKRLGCNADVITYNFLIECHCKDENVEEAAKVLNLMV-KK 379

Query: 722 GIPPTEELYRMVLETLQSASEFTKVEELVQKMDSL 826
           G  P    +  +   +    +      +  KM  L
Sbjct: 380 GCSPNASTFNPIFRCIAKLKDVNGAHRMYTKMKDL 414


>gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 532

 Score =  248 bits (632), Expect = 4e-63
 Identities = 126/276 (45%), Positives = 171/276 (61%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            LY +L+ GW  A ++  A  V  E+K  G++PN  SYT +I+ LC  G++  A +VF EM
Sbjct: 252  LYTSLINGWCRARNISEAERVFKEMKMAGIKPNVYSYTIVIDALCRCGQITRAHDVFAEM 311

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            +   C PN  T N  +RV VK     +  +V +Q K+ G   D  TY  LI+  C+    
Sbjct: 312  IDVGCEPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRCGCPADTITYNFLIESHCRDDNL 371

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
             +A+K L+ MI +   PNPS FN IF+    L DV  A+R++ +M+   C P+T TYN+L
Sbjct: 372  DEAIKVLNLMIKKECIPNPSTFNTIFKCIEKLQDVNAAHRMYAKMKDLNCRPNTVTYNIL 431

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+FA  KSTDMV++L++EMD    EP+VNTY ILI M+C  GHWN AYK   EM EEKG
Sbjct: 432  MRMFAGAKSTDMVLKLKKEMDENEVEPNVNTYRILITMYCGKGHWNNAYKFFNEMIEEKG 491

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
            + P+  LY+MVLE L+ A +  K EELV+KM   GF
Sbjct: 492  LKPSMSLYQMVLEQLRKAEQLKKHEELVEKMVDRGF 527



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 34/256 (13%)
 Frame = +2

Query: 161 AWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQ 340
           AW++   M   N   +++T +  +R  V+     EA    ++ +  G +PD   + ++I 
Sbjct: 165 AWHLIDLMKAKNVDVSIETFSILIRRYVRAGLAAEAVHAFNRMEDYGCVPDKIAFSIVIS 224

Query: 341 GCCKLGKWQDAMKQLD----------------------------------EMIGRGLTPN 418
             CK  + ++A    D                                  EM   G+ PN
Sbjct: 225 SLCKKRRAEEAQTFFDKLKDNFEPDVILYTSLINGWCRARNISEAERVFKEMKMAGIKPN 284

Query: 419 PSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQ 598
             ++  + +       +  A+ +F  M   GC+P++ T+N LMR+  +   T+ V+++  
Sbjct: 285 VYSYTIVIDALCRCGQITRAHDVFAEMIDVGCEPNSITFNNLMRVHVKAGRTEKVLQVYN 344

Query: 599 EMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQSA 778
           +M   GC  D  TY  LI+  C   + + A K++  M +++ I P    +  + + ++  
Sbjct: 345 QMKRCGCPADTITYNFLIESHCRDDNLDEAIKVLNLMIKKECI-PNPSTFNTIFKCIEKL 403

Query: 779 SEFTKVEELVQKMDSL 826
            +      +  KM  L
Sbjct: 404 QDVNAAHRMYAKMKDL 419


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  247 bits (630), Expect = 7e-63
 Identities = 124/277 (44%), Positives = 169/277 (61%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y NL+RGW  A ++  A  V  E+K  G  PN  +YT +I+ LC  G++  A +VF EM
Sbjct: 248  VYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEM 307

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            L   C PN  T N  +RV VK     +  +V +Q K+ G  PD  TY  LI+  CK G  
Sbjct: 308  LDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNL 367

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
             +A+K L+ M+ +G +PN S FN +F   A L DV GA+RL+ +M+   C  +T TYN+L
Sbjct: 368  DEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNIL 427

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+F   KSTDMV++L++EMD    EP+VNTY +LI M+C  GHWN AYK  REM EEK 
Sbjct: 428  MRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKC 487

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGFS 835
            + P+  +Y  VL+ L+ A +  K EELV  M   GF+
Sbjct: 488  LKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGFA 524



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 44/187 (23%), Positives = 80/187 (42%)
 Frame = +2

Query: 269 FKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEV 448
           ++V+   K R +   + T+ +LI+   + G   +A+   + M      P+  AF+ +  +
Sbjct: 162 WQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISI 221

Query: 449 TAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEPD 628
                    A   F+ ++    +PD   Y  L+R + +  +     R+  EM   GC P+
Sbjct: 222 LCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPN 280

Query: 629 VNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQSASEFTKVEELV 808
           V TYTI+I   C  G    A+ +  EM  + G  P    +  +L     A    KV ++ 
Sbjct: 281 VYTYTIVIDALCRCGQITRAHDVFAEML-DVGCEPNSITFNNLLRVHVKAGRTEKVLQVY 339

Query: 809 QKMDSLG 829
            +M  +G
Sbjct: 340 NQMKRMG 346


>gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]
          Length = 535

 Score =  244 bits (624), Expect = 4e-62
 Identities = 123/276 (44%), Positives = 172/276 (62%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            LY NL+ GW  A ++  A  V +E+K  G++PN  +YT +I+ LC  G++    +VF EM
Sbjct: 255  LYTNLIHGWCRAGNISEAESVFSEMKKAGIKPNVYTYTIVIDALCRCGQITRGHDVFSEM 314

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            +   C PN  T N  +RV VK    ++  +V +Q K+     DV TY  L+   CK    
Sbjct: 315  IDVGCQPNAVTFNNLMRVHVKAGRTQKVLQVFNQMKRLKCEADVITYNFLVDCHCKDENL 374

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
             DA K L+ M+ +G  PN S FN IF + A L DV  A+R++ +M+   C P+T TYNVL
Sbjct: 375  DDAAKVLNLMVKKGCNPNSSTFNPIFRLVAKLKDVNAAHRMYAKMKELKCKPNTVTYNVL 434

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            M++FA++KS DMV++L++EMD    EP+VNTY +LI MFC  GHWN AY+  REM EEK 
Sbjct: 435  MQMFAESKSMDMVLKLKEEMDESEVEPNVNTYRVLIVMFCGMGHWNNAYRFFREMIEEKC 494

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
            + P+  +Y MVLE L+ A +  K EELV+KM + GF
Sbjct: 495  LKPSFPVYEMVLEQLRKAGQLKKHEELVEKMVARGF 530


>gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus vulgaris]
          Length = 530

 Score =  244 bits (624), Expect = 4e-62
 Identities = 118/276 (42%), Positives = 180/276 (65%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y +L+ GW  A ++  A EV +++K  G++PN  +Y+ +I+ LC  G++  A +VF EM
Sbjct: 250  VYTSLVYGWCRAGNISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEM 309

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            + + C PN  T N+ +RV VK     +  +V +Q K+ G   D  +Y  +I+  C+    
Sbjct: 310  IDSGCDPNAVTFNSLMRVHVKAGRTEKVLQVHNQMKRLGCPADTISYNFIIESHCRDENL 369

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
             +A+K L+ M+ +G+ PN S FN +F   A L+DV GA+R++ RM+   C P+T TYN+L
Sbjct: 370  DEAVKILNLMVKKGVAPNASTFNCVFGCIAKLHDVNGAHRMYARMKELKCQPNTLTYNIL 429

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+FA++KSTDMV+++++EMD    EP+VNTY ILI MFC+  HWN AYK+++EM EEK 
Sbjct: 430  MRMFAESKSTDMVLKMKKEMDENQVEPNVNTYRILISMFCEMKHWNNAYKLVKEMVEEKC 489

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
            + P   +Y  VLE L++A +  K EELV KM + GF
Sbjct: 490  LRPNLSVYETVLELLRNAGQLKKHEELVDKMVARGF 525



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 63/281 (22%), Positives = 112/281 (39%), Gaps = 35/281 (12%)
 Frame = +2

Query: 89  GLRPNSESYTCLIEGLCGEGKVKD-AWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVRE 265
           G  P+ E Y  +++ L G+ +  D AW+V   M       +V T +A VR  V+     E
Sbjct: 139 GFPPSPEPYDEMLD-LAGKLRHFDLAWHVIDLMKTRGVEISVHTFSALVRRYVRAGLAAE 197

Query: 266 AFKVVSQFKQRGLMPDVTTYELLIQ----------------------------------G 343
           A    ++ +  G  PD   + ++I                                   G
Sbjct: 198 AVHAFNRMEDYGCTPDKVAFSIVISSLCKKRRANEAQSFFESLKHKFEPDVLVYTSLVYG 257

Query: 344 CCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPD 523
            C+ G    A +   +M   G+ PN   ++ + +       +  A+ +F  M  SGCDP+
Sbjct: 258 WCRAGNISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMIDSGCDPN 317

Query: 524 TQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIR 703
             T+N LMR+  +   T+ V+++  +M   GC  D  +Y  +I+  C   + + A KI+ 
Sbjct: 318 AVTFNSLMRVHVKAGRTEKVLQVHNQMKRLGCPADTISYNFIIESHCRDENLDEAVKILN 377

Query: 704 EMTEEKGIPPTEELYRMVLETLQSASEFTKVEELVQKMDSL 826
            M  +KG+ P    +  V   +    +      +  +M  L
Sbjct: 378 LMV-KKGVAPNASTFNCVFGCIAKLHDVNGAHRMYARMKEL 417



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 42/177 (23%), Positives = 78/177 (44%)
 Frame = +2

Query: 299 GLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGA 478
           G  P    Y+ ++    KL  +  A   +D M  RG+  +   F+ +            A
Sbjct: 139 GFPPSPEPYDEMLDLAGKLRHFDLAWHVIDLMKTRGVEISVHTFSALVRRYVRAGLAAEA 198

Query: 479 YRLFNRMESSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKM 658
              FNRME  GC PD   +++++    + +  +      + +  K  EPDV  YT L+  
Sbjct: 199 VHAFNRMEDYGCTPDKVAFSIVISSLCKKRRANEAQSFFESLKHK-FEPDVLVYTSLVYG 257

Query: 659 FCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQSASEFTKVEELVQKMDSLG 829
           +C  G+ + A ++  +M +  GI P    Y +V+++L    + T+  ++  +M   G
Sbjct: 258 WCRAGNISKAEEVFSDM-KMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMIDSG 313


>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
            gi|550339796|gb|EEE94747.2| hypothetical protein
            POPTR_0005s26670g [Populus trichocarpa]
          Length = 533

 Score =  243 bits (620), Expect = 1e-61
 Identities = 119/276 (43%), Positives = 171/276 (61%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y NL+RGW  A ++  A  V  E+K  G++PN  +Y+ +I+ LC  G++  A ++F EM
Sbjct: 253  VYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEM 312

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            L A C PN  T N+ +R+ VK     +  +V +Q K+ G  PD  TY  LI+  CK    
Sbjct: 313  LDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENL 372

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            +DA+K +  M  +G  PN S FN +F   A L DV  A+R++ +M+   C+ +T TYN L
Sbjct: 373  EDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTL 432

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            M++F  +KSTDMV++L+ EMD    EP+VNTY +LI M+C  GHWN AYK  REM +EK 
Sbjct: 433  MKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKC 492

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
            + P+  +Y MVL+ L+ A +  K EELV+KM   GF
Sbjct: 493  LRPSLPVYDMVLQQLRKAGQLKKHEELVEKMVDRGF 528



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 45/188 (23%), Positives = 80/188 (42%)
 Frame = +2

Query: 266 AFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFE 445
           A+ V+   K R +   V T+ +L++   + G   +A+   + M      P+  AF+ +  
Sbjct: 166 AWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILIS 225

Query: 446 VTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEP 625
           +         A   F+ ++    +PD   Y  L+R + +  +     R+  EM   G +P
Sbjct: 226 ILCRKRRASEAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKP 284

Query: 626 DVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQSASEFTKVEEL 805
           +V TY+I+I   C  G    A+ I  EM  + G  P    Y  ++     A    KV ++
Sbjct: 285 NVYTYSIVIDSLCRCGQITRAHDIFAEML-DAGCQPNSITYNSLMRIHVKAGRTEKVLQV 343

Query: 806 VQKMDSLG 829
             +M  LG
Sbjct: 344 YNQMKRLG 351


>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
            gi|482574795|gb|EOA38982.1| hypothetical protein
            CARUB_v10011494mg [Capsella rubella]
          Length = 532

 Score =  243 bits (619), Expect = 1e-61
 Identities = 119/275 (43%), Positives = 173/275 (62%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y NL+RGW  A ++  A  V  E+K  G+ PN  +Y+ +I+ LC  G++  A +VF +M
Sbjct: 252  VYTNLVRGWCRAGEISEAERVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM 311

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            L + C PN  T N  +RV VK     +  +V +Q K+ G  PD  TY  LI+  C+    
Sbjct: 312  LDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENL 371

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            ++A+K L+ MI +    N S FN IF       DV GA+R++++M  + C+P+T TYN+L
Sbjct: 372  ENAVKVLNTMIKKNCDVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNIL 431

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+FA +KSTDMV+++++EM+ K  EP+VNTY +L+ MFC  GHWN AYK+ +EM EEK 
Sbjct: 432  MRMFAGSKSTDMVLKMKKEMEDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKC 491

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLG 829
            + P+  LY MVL  L+ A +  K EELV+KM   G
Sbjct: 492  LTPSLSLYEMVLSQLRKAGQLKKHEELVEKMIQKG 526



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 45/203 (22%), Positives = 88/203 (43%)
 Frame = +2

Query: 221 NAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIG 400
           N  + +  K  +   A+ ++   K R +   + T+ +LI+   + G   +A+   + M  
Sbjct: 150 NEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIKRYVRAGLASEAVHCFNRMED 209

Query: 401 RGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKSTDM 580
            G  P+  AF+ +  + +       A   F+ ++    +PD   Y  L+R + +      
Sbjct: 210 YGCVPDKIAFSIVISILSRKRRATEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISE 268

Query: 581 VMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVL 760
             R+ +EM   G EP+V TY+I+I   C  G  + A+ +  +M  + G  P    +  ++
Sbjct: 269 AERVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML-DSGCAPNAITFNNLM 327

Query: 761 ETLQSASEFTKVEELVQKMDSLG 829
                A    KV ++  +M  LG
Sbjct: 328 RVHVKAGRTEKVLQVYNQMKKLG 350


>ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g20300, mitochondrial; Flags: Precursor
            gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity
            to a hypothetical protein T3P18.15 gi|5454201 from
            Arabidopsis thaliana BAC T3P18 gb|AC005698 and contains
            multiple PPR PF|01535 repeats [Arabidopsis thaliana]
            gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8
            [Arabidopsis thaliana] gi|15450347|gb|AAK96467.1|
            At1g20300/F14O10_8 [Arabidopsis thaliana]
            gi|332191838|gb|AEE29959.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 537

 Score =  242 bits (618), Expect = 2e-61
 Identities = 119/275 (43%), Positives = 173/275 (62%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y NL+RGW  A ++  A +V  E+K  G+ PN  +Y+ +I+ LC  G++  A +VF +M
Sbjct: 257  VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM 316

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            L + C PN  T N  +RV VK     +  +V +Q K+ G  PD  TY  LI+  C+    
Sbjct: 317  LDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENL 376

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            ++A+K L+ MI +    N S FN IF       DV GA+R++++M  + C+P+T TYN+L
Sbjct: 377  ENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNIL 436

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+F  +KSTDMV+++++EMD K  EP+VNTY +L+ MFC  GHWN AYK+ +EM EEK 
Sbjct: 437  MRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKC 496

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLG 829
            + P+  LY MVL  L+ A +  K EELV+KM   G
Sbjct: 497  LTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 42/188 (22%), Positives = 82/188 (43%)
 Frame = +2

Query: 266 AFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFE 445
           A+ ++   K R +   + T+ +LI+   + G   +A+   + M   G  P+  AF+ +  
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229

Query: 446 VTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEP 625
             +       A   F+ ++    +PD   Y  L+R + +        ++ +EM   G EP
Sbjct: 230 NLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288

Query: 626 DVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQSASEFTKVEEL 805
           +V TY+I+I   C  G  + A+ +  +M  + G  P    +  ++     A    KV ++
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADML-DSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347

Query: 806 VQKMDSLG 829
             +M  LG
Sbjct: 348 YNQMKKLG 355


>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297336219|gb|EFH66636.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 537

 Score =  240 bits (612), Expect = 9e-61
 Identities = 118/275 (42%), Positives = 174/275 (63%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y NL+RGW  A ++  A +V  ++K  G+ PN  +Y+ +I+ LC  G++  A +VF +M
Sbjct: 257  VYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM 316

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            L + C PN  T N  +RV VK     +  +V +Q K+ G  PD  TY  LI+  C+    
Sbjct: 317  LDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENL 376

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            ++A+K L+ MI +    N S FN IF       DV GA+R++++M  + C+P+T TYN+L
Sbjct: 377  ENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNIL 436

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+FA +KSTDMV++++++MD K  EP+VNTY +L+ MFC  GHWN AYK+ +EM EEK 
Sbjct: 437  MRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKC 496

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLG 829
            + P+  LY MVL  L+ A +  K EELV+KM   G
Sbjct: 497  LTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 43/203 (21%), Positives = 87/203 (42%)
 Frame = +2

Query: 221 NAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIG 400
           N  + +  K  +   A+ ++   K R +   + T+ +LI+   + G   +A+   + M  
Sbjct: 155 NEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMED 214

Query: 401 RGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKSTDM 580
            G  P+  AF+ +    +       A   F+ ++    +PD   Y  L+R + +      
Sbjct: 215 YGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISE 273

Query: 581 VMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVL 760
             ++ ++M   G EP+V TY+I+I   C  G  + A+ +  +M  + G  P    +  ++
Sbjct: 274 AEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML-DSGCAPNAITFNNLM 332

Query: 761 ETLQSASEFTKVEELVQKMDSLG 829
                A    KV ++  +M  LG
Sbjct: 333 RVHVKAGRPEKVLQVYNQMKKLG 355


>ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Cucumis sativus]
            gi|449519964|ref|XP_004167004.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Cucumis sativus]
          Length = 534

 Score =  237 bits (604), Expect = 8e-60
 Identities = 121/277 (43%), Positives = 167/277 (60%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y +L+ GW  A D+  A  V  E+K  G+ PN  +Y+ +I+ LC  G++  A +VF EM
Sbjct: 254  VYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEM 313

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            L A C PN  T N  +RV ++     +  +V +Q K+     D+ TY  LI+  CK    
Sbjct: 314  LDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNL 373

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
             +A+K L+ M     TPN S+FN IF   A   DV GA+R+F RM+  GC P+T TYN+L
Sbjct: 374  GEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNIL 433

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+FA  KS DM+ +L++EMD +  EP+ NTY  LI ++C  GHWN AY   REM +EK 
Sbjct: 434  MRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKC 493

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGFS 835
            I P+  LY+MVLE L+ A +  K EELV KM   GF+
Sbjct: 494  IKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFA 530


>ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Solanum tuberosum]
          Length = 549

 Score =  235 bits (599), Expect = 3e-59
 Identities = 117/277 (42%), Positives = 169/277 (61%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            LY +L+ GW  A ++  A  +  ++K  G++PN  +Y+ +I+ LC  G+   A++VF EM
Sbjct: 269  LYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYDVFSEM 328

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            +   C PN  T N  +RV VK     +  +V +Q K+    PDV TY  LI   C+    
Sbjct: 329  IDVGCQPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCSPDVITYNFLIDAHCRDENR 388

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
             +A+K ++ M  +   PN S FN IF   A   DV  A+RL+ +M+   C P+T T N+L
Sbjct: 389  DEALKVVNVMAKKRCEPNASTFNPIFRCIAKARDVNAAHRLYAKMKELNCKPNTVTCNIL 448

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            M++F ++KSTDMV++LR+EMD    EP+VNT+ ILI M+C  GHWN AYK  REM EEK 
Sbjct: 449  MKMFVESKSTDMVIKLRKEMDENEVEPNVNTFKILISMYCGMGHWNNAYKYFREMIEEKC 508

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGFS 835
            + P+E +Y MVL+ L+ A +  K EELV+KM   GF+
Sbjct: 509  LRPSESVYDMVLKQLRKAGQLRKHEELVEKMVDRGFA 545



 Score =  100 bits (250), Expect = 8e-19
 Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 2/275 (0%)
 Frame = +2

Query: 8   YNNL--MRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCE 181
           YN +  + G +   D+  A+ ++  +K + ++   E+++ LI      G   +A + F  
Sbjct: 166 YNEMIDLAGKVRQFDV--AWHLIDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNR 223

Query: 182 MLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGK 361
           M   +C P+ +  +  + +L K     EA       K +    DV  Y  L+ G C+ G 
Sbjct: 224 MEDYDCKPDRNAFSIVIGILCKKRRAAEAQSFFDSLKDK-FEADVVLYTSLVHGWCRAGN 282

Query: 362 WQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNV 541
             +A +   +M   G+ PN   ++ + +          AY +F+ M   GC P+  T+N 
Sbjct: 283 ISEAERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAITFNN 342

Query: 542 LMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEK 721
           LMR+  +   T+ V+++  +M    C PDV TY  LI   C   + + A K++  M  +K
Sbjct: 343 LMRVHVKAGRTEKVLQVYNQMKRLSCSPDVITYNFLIDAHCRDENRDEALKVVNVMA-KK 401

Query: 722 GIPPTEELYRMVLETLQSASEFTKVEELVQKMDSL 826
              P    +  +   +  A +      L  KM  L
Sbjct: 402 RCEPNASTFNPIFRCIAKARDVNAAHRLYAKMKEL 436


>ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Solanum lycopersicum]
          Length = 543

 Score =  235 bits (599), Expect = 3e-59
 Identities = 116/277 (41%), Positives = 169/277 (61%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            LY +L+ GW  A ++  A  +  ++K  G++PN  +Y+ +I+ LC  G+   A++VF EM
Sbjct: 263  LYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYDVFSEM 322

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            +   C PN  T N  +RV VK     +  +V +Q K+    PDV TY  LI   C+    
Sbjct: 323  IDVGCQPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCDPDVITYNFLIDARCRDENR 382

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
             +A+K ++ M  +G  PN S FN IF   A   DV  A+RL+ +M+   C P+T T N+L
Sbjct: 383  DEALKVVNVMAKKGCEPNASTFNPIFRCIAKARDVNAAHRLYAKMKELNCKPNTVTCNIL 442

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            M++FA++KSTDMV +++ EMD    EP+VNT+ ILI M+C  GHWN AYK  REM EE+ 
Sbjct: 443  MKMFAESKSTDMVFKIKNEMDENEVEPNVNTFKILISMYCGMGHWNNAYKYFREMIEERC 502

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGFS 835
            + P+E +Y MVL+ L+ A +  K EELV+KM   GF+
Sbjct: 503  LRPSESVYDMVLKQLRKAGQLRKHEELVEKMVDRGFA 539



 Score =  104 bits (260), Expect = 6e-20
 Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
 Frame = +2

Query: 8   YNNL--MRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCE 181
           YN +  + G +   D+  A+ ++  +K + ++   E+++ LI      G   +A + F  
Sbjct: 160 YNEMIDLAGKVRQFDV--AWHLIDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNR 217

Query: 182 MLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGK 361
           M   +C P+ +  +  V +L K     EA       K +    DV  Y  L+ G C+ G 
Sbjct: 218 MEDYDCKPDRNAFSVVVGILCKKRRAAEAQSFFDSLKDK-FEADVVLYTSLVHGWCRAGN 276

Query: 362 WQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNV 541
             +A +   +M   G+ PN   ++ + +          AY +F+ M   GC P+  T+N 
Sbjct: 277 ISEAERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAITFNN 336

Query: 542 LMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEK 721
           LMR+  +   T+ V+++  +M    C+PDV TY  LI   C   + + A K++  M  +K
Sbjct: 337 LMRVHVKAGRTEKVLQVYNQMKRLSCDPDVITYNFLIDARCRDENRDEALKVVNVMA-KK 395

Query: 722 GIPPTEELYRMVLETLQSASEFTKVEELVQKMDSL 826
           G  P    +  +   +  A +      L  KM  L
Sbjct: 396 GCEPNASTFNPIFRCIAKARDVNAAHRLYAKMKEL 430


>ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutrema salsugineum]
            gi|557094185|gb|ESQ34767.1| hypothetical protein
            EUTSA_v10007329mg [Eutrema salsugineum]
          Length = 534

 Score =  234 bits (598), Expect = 4e-59
 Identities = 114/271 (42%), Positives = 168/271 (61%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y NL+RGW  A ++  A  V  E+K  G+ PN  +Y+ +I+ LC  G++  A +VF +M
Sbjct: 254  VYTNLVRGWCRAGEISEAERVFKEMKVAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM 313

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            +   C PN  T N  +R  VK     +  +V +Q K+ G   D  TY  LI+  C+ G  
Sbjct: 314  IDCGCAPNAITFNNLMRAHVKAGRTEKVLQVYNQMKKLGCEADTITYNFLIETHCRDGNL 373

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            ++A+K L+ MI +    N S FN IF       DV GA+R++++M  + C+ +T TYN+L
Sbjct: 374  ENAVKVLNSMIKKRCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEANTVTYNIL 433

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+F ++KSTDMV+++++EMD K  EP+VNTY +L+ M+C  GHW+ AYK  REM EEK 
Sbjct: 434  MRMFVESKSTDMVLKMKKEMDEKEVEPNVNTYRLLVTMYCGMGHWSNAYKFFREMVEEKC 493

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKM 817
            + P+  LY MVL  L+ A +  K EELV+KM
Sbjct: 494  LIPSLSLYEMVLAQLRKAGQLKKHEELVEKM 524



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 43/188 (22%), Positives = 83/188 (44%)
 Frame = +2

Query: 266 AFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFE 445
           A+ ++   K R +   + T+ +LI+   + G   +A+   + M   G  P+  AF+ +  
Sbjct: 167 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 226

Query: 446 VTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEP 625
           + +       A   F+ ++    +PD   Y  L+R + +        R+ +EM   G EP
Sbjct: 227 ILSRKRRASEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGEISEAERVFKEMKVAGIEP 285

Query: 626 DVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQSASEFTKVEEL 805
           +V TY+I+I   C  G  + A+ +  +M  + G  P    +  ++     A    KV ++
Sbjct: 286 NVYTYSIVIDALCRCGQISRAHDVFADMI-DCGCAPNAITFNNLMRAHVKAGRTEKVLQV 344

Query: 806 VQKMDSLG 829
             +M  LG
Sbjct: 345 YNQMKKLG 352


>emb|CBI18917.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  233 bits (594), Expect = 1e-58
 Identities = 117/276 (42%), Positives = 169/276 (61%)
 Frame = +2

Query: 5    LYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEM 184
            +Y +L+ GW  A ++  A  V  E+K  G++PN  +Y+ +I+ LC  G++  A +VF EM
Sbjct: 217  VYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEM 276

Query: 185  LGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKW 364
            +   C PN  T N  +RV VK     +  +V +Q K+ G  PD  TY  LI+  C+    
Sbjct: 277  IDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNL 336

Query: 365  QDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMESSGCDPDTQTYNVL 544
            ++A+K L+  + +G   N S+FN IF   + L DV  A+R+F +M+   C P+T TYN+L
Sbjct: 337  EEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNIL 395

Query: 545  MRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKG 724
            MR+FA  KSTDMV++LR+EMD    EP+ NTY +LI  FC  GHWN AY   +EM EEK 
Sbjct: 396  MRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKC 455

Query: 725  IPPTEELYRMVLETLQSASEFTKVEELVQKMDSLGF 832
            + P+  +Y MVL+ L+ A +  K EELV+KM + GF
Sbjct: 456  LRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGF 491



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 61/240 (25%), Positives = 100/240 (41%)
 Frame = +2

Query: 107 ESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVRVLVKNEEVREAFKVVSQ 286
           E Y  +I+     G   +A + F  M    C P+    +  +  L K     EA      
Sbjct: 147 EPYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDS 206

Query: 287 FKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLND 466
            K R   PDV  Y  L+ G C+ G   +A +   EM   G+ PN   ++ + +       
Sbjct: 207 LKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQ 265

Query: 467 VKGAYRLFNRMESSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTI 646
           +  A+ +F+ M   GCDP+  T+N LMR+  +   T+ V+++  +M   GC PD  TY  
Sbjct: 266 ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNF 325

Query: 647 LIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQSASEFTKVEELVQKMDSL 826
           LI+  C   +   A KI+  +  +KG       +  +   +    +      +  KM  L
Sbjct: 326 LIESHCRDDNLEEAVKILNSV--KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDL 383