BLASTX nr result
ID: Ephedra27_contig00025015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00025015
(1770 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006844770.1| hypothetical protein AMTR_s00016p00258500 [A... 315 e-127
ref|XP_004250504.1| PREDICTED: endoribonuclease Dicer homolog 2-... 314 e-123
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-... 300 e-121
gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata] 305 e-120
ref|NP_566199.4| endoribonuclease Dicer-like 2 [Arabidopsis thal... 295 e-119
gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana] 295 e-119
gb|EOY09713.1| Dicer-like protein isoform 4, partial [Theobroma ... 286 e-119
ref|XP_006300010.1| hypothetical protein CARUB_v10016233mg, part... 289 e-118
ref|XP_002514810.1| ATP binding protein, putative [Ricinus commu... 278 e-118
ref|XP_006480493.1| PREDICTED: endoribonuclease Dicer homolog 2-... 291 e-117
ref|XP_006428679.1| hypothetical protein CICLE_v10010912mg [Citr... 291 e-117
ref|XP_002315119.1| hypothetical protein POPTR_0010s18870g [Popu... 291 e-117
ref|XP_006408318.1| hypothetical protein EUTSA_v10019898mg [Eutr... 291 e-117
gb|EXB88160.1| Endoribonuclease Dicer-2-like protein [Morus nota... 281 e-115
gb|EOY09710.1| Dicer-like protein isoform 1 [Theobroma cacao] 274 e-115
ref|XP_004303843.1| PREDICTED: endoribonuclease Dicer homolog 2-... 280 e-115
ref|XP_006428678.1| hypothetical protein CICLE_v10010911mg [Citr... 283 e-114
ref|XP_006480490.1| PREDICTED: endoribonuclease Dicer homolog 2-... 282 e-114
ref|XP_006480488.1| PREDICTED: endoribonuclease Dicer homolog 2-... 282 e-114
ref|XP_004982513.1| PREDICTED: endoribonuclease Dicer homolog 2a... 291 e-113
>ref|XP_006844770.1| hypothetical protein AMTR_s00016p00258500 [Amborella trichopoda]
gi|548847241|gb|ERN06445.1| hypothetical protein
AMTR_s00016p00258500 [Amborella trichopoda]
Length = 1424
Score = 315 bits (808), Expect(2) = e-127
Identities = 186/447 (41%), Positives = 263/447 (58%), Gaps = 9/447 (2%)
Frame = -3
Query: 1327 SCMKKRQGMAEYP------RIFGMTASPVYSKGKCFTECI-TEISSLEITLDAKVYTLKD 1169
+C+ K EYP RIFGMTASPV SKG + +I LE L++KV+T +
Sbjct: 175 ACIMKEFYHREYPLNSRIPRIFGMTASPVNSKGLDSQQGYGNKIQDLETLLNSKVFTTVE 234
Query: 1168 ITVLEAFISYPDVKIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAE 989
+ L A+I +VK+ Y IP + + A+L L+ KH ++ + + DS
Sbjct: 235 ESELAAYIPSSNVKLKLYNHVDIPCYLSSSIFARLQDLKLKHTCDLDGVPANGYVNDSVR 294
Query: 988 RKIRKLYSLLHFCIEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSL 809
RKI +L+ FCI+E+G+W AA A E T + L + + N V+ F QD L
Sbjct: 295 RKIARLHDTFLFCIQELGVWLAAKAAE-SLSTNETEIFLFDWMNDEVNKNTVRSFSQDVL 353
Query: 808 STCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITS 629
+ +P+ WH +++ + AG LS KV L+ +L +R K RCIIFVER IT+
Sbjct: 354 EMLSEYIPTGELWHIGSNLKADLDAGLLSGKVHCLIQSLMEYRKEKHLRCIIFVERVITA 413
Query: 628 VVISKILQSMDCFTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEG 449
+V+ ++L + F+ YM GN + +Q +++ Q ++++FR G VNIIVATQ+LEEG
Sbjct: 414 IVLKELLNQLQKFSIWKTTYMAGNNSCLQSQTRVQQINVVDNFRGGMVNIIVATQILEEG 473
Query: 448 LDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLV--RDGEQLAQVNRLLGGEKQM 275
LD+Q CN+V+RYD T+ SFIQSRGRARM S YLL+V +D ++++ L K M
Sbjct: 474 LDVQSCNLVIRYDPSVTVRSFIQSRGRARMPGSDYLLIVESKDYATFRRIDKYLVSGKVM 533
Query: 274 REAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQP 95
R +L+ ++ L YY VE TGA+VT NSSVAL+Y YCSQLP DRY+KS P
Sbjct: 534 RTESLRRKFDPALPIENPLHSGEYYRVETTGAIVTLNSSVALIYRYCSQLPADRYFKSCP 593
Query: 94 IFQIDKEGGQCLLKLPTNCPIPRVIVH 14
F ID+E G C+L+LP +CPIP V VH
Sbjct: 594 RFDIDEERGFCILRLPKSCPIPPVKVH 620
Score = 169 bits (429), Expect(2) = e-127
Identities = 77/138 (55%), Positives = 100/138 (72%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQ++ FE A +QNTI +LDTGAGKT+IA ML++ + H +RKP N A+FLVP
Sbjct: 36 RSYQIDAFEMAKKQNTIVFLDTGAGKTLIAVMLVRHYAHYLRKPSDNVAIFLVPTVHLVK 95
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
LK++TDLKVG +WG MGVDLW +W+++LQ+YEV VMT QI LDNLRH FF +
Sbjct: 96 QQADVLKMYTDLKVGVFWGEMGVDLWSGVKWKEQLQMYEVLVMTAQILLDNLRHCFFKLE 155
Query: 1394 GLRVLIFDECHHARKNHP 1341
+++LIFDECHHA+ P
Sbjct: 156 MIKLLIFDECHHAKGRSP 173
>ref|XP_004250504.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Solanum
lycopersicum]
Length = 1402
Score = 314 bits (804), Expect(2) = e-123
Identities = 182/434 (41%), Positives = 261/434 (60%), Gaps = 7/434 (1%)
Frame = -3
Query: 1300 AEYPRIFGMTASPVYSKGKCFTECI-TEISSLEITLDAKVYTLKDITVLEAFISYPDVKI 1124
A+ PRIFGMTASP+ SKG + +I LE + +KVYT VL +I + + K+
Sbjct: 180 AQLPRIFGMTASPIKSKGPSTPDSYWRKIHDLENLMHSKVYTCDSEAVLAEYIPFSNPKL 239
Query: 1123 ICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFCIE 944
Y+ IP + K L + L+EKH I + + SA SA+R++ KLYS FC+
Sbjct: 240 KIYKHVDIPSTLSKSLAHDMERLKEKHECSITKSTLSDKSAASAKRRLSKLYSAFLFCLS 299
Query: 943 EMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHS 764
EMG+W A A EF + + + F GE ++ V+ F D+ LPS W
Sbjct: 300 EMGVWLAFKAAEFLSQQETDFFSW--GELDVCAQTIVRDFSSDASKVFSACLPSGPHWSI 357
Query: 763 EDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM-DCFT 587
DI+ AG+LS KV LV++L +R+ K RCIIFVER IT++V+ +L + +
Sbjct: 358 GGDIQANTDAGYLSSKVHCLVESLLEYRNLKDLRCIIFVERIITAIVLRSLLNELLPKLS 417
Query: 586 HLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDL 407
E G+ + +Q +S++ Q KI+E+FR G VNIIVAT +LEEGLD+Q CN+V+R+D
Sbjct: 418 GWRTECTAGHASVVQSQSRKIQNKIVEEFRKGVVNIIVATSILEEGLDVQSCNLVIRFDP 477
Query: 406 PKTICSFIQSRGRARMKDSHYLLLVRDGEQ--LAQVNRLLGGEKQMREAALQNDRVKSVS 233
T+CS+IQSRGRARM++S +LL+V+ G++ LA++ + + MR+ +L R S
Sbjct: 478 SATVCSYIQSRGRARMQNSDFLLMVKSGDESTLARMQNFMASGEMMRQESL---RHASEP 534
Query: 232 KSVLLD---PESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQC 62
S L+D E Y VE TGA++T +SSV+LLY YCS+LP D Y+KS P IDKE C
Sbjct: 535 CSPLVDEMYDEPCYKVESTGAIITLSSSVSLLYFYCSRLPSDGYFKSYPRCVIDKESRTC 594
Query: 61 LLKLPTNCPIPRVI 20
L+LP +CP+ R+I
Sbjct: 595 TLQLPKSCPLQRII 608
Score = 155 bits (393), Expect(2) = e-123
Identities = 77/153 (50%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E A +QNTI YL+TG+GKT+IA MLL+++ + +RKP AVFLVP
Sbjct: 25 RSYQLEALEAALKQNTIVYLETGSGKTLIAIMLLRSYAYLLRKPSPYIAVFLVPTVVLVT 84
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
L + TDLKVG YWG MGVD WD W++++ +EV VMTP I L LRH+F D
Sbjct: 85 QQGDALMMQTDLKVGTYWGEMGVDFWDAATWKRQVDGHEVLVMTPAILLSALRHNFLQID 144
Query: 1394 GLRVLIFDECHHARKNHPCIRFIM---HEKKTR 1305
++V+IFDECH+AR HP +M H + TR
Sbjct: 145 MIKVIIFDECHNARGKHPYASIMMEFYHRQLTR 177
>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
Length = 1394
Score = 300 bits (768), Expect(2) = e-121
Identities = 168/438 (38%), Positives = 259/438 (59%), Gaps = 6/438 (1%)
Frame = -3
Query: 1312 RQGMAEYPRIFGMTASPVYSKGKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPD 1133
R + PRIFGMTASP+ +KG + LE +++K+YT VL F+ +
Sbjct: 176 RSNNSNLPRIFGMTASPIKTKGVNDLMHSKNMIELENLMNSKIYTSVSEAVLAEFVPFST 235
Query: 1132 VKIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHF 953
K+ Y+ IP + +++ +L L+ K+ +E+L + ES+ +SA +KI KL+S F
Sbjct: 236 PKLTHYKDKDIPSALFENVAHQLEILKNKYEHSLESLNLMESTKESARKKISKLFSAFLF 295
Query: 952 CIEEMGIWAAAIACEFHRRTKPNKFGLNI---GEKNIIVTNAVKHFLQDSLSTCQQALPS 782
C+ ++G+W A A EF ++I G+ ++ +K+F +D+ LPS
Sbjct: 296 CLNDLGLWLALKAAEFSFCDD-----MDICCWGQLDLSGEEIIKNFNKDAYKVISTYLPS 350
Query: 781 EMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQS 602
+ DD+E ++GFL+ KV LV +L +R K RCI+FVER IT++V+ K+L
Sbjct: 351 DRELSVGDDLEADAESGFLTTKVICLVGSLLQYRHLKNLRCIVFVERVITAIVLQKLLSK 410
Query: 601 M-DCFTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNI 425
+ + Y+ GN + +Q +S+R Q ++E+FR G VN+IV+T +LEEGLD+Q CN+
Sbjct: 411 LLPKLSGWEAGYIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLDVQSCNL 470
Query: 424 VVRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQ--LAQVNRLLGGEKQMREAALQND 251
V+R+D T+CSFIQSRGRARM++S YLL+V+ G+ L+++ L K MRE +L+N
Sbjct: 471 VIRFDPSATVCSFIQSRGRARMQNSDYLLMVKSGDDKTLSRLRTYLDSGKVMREESLRNA 530
Query: 250 RVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEG 71
+ LD E +Y VE T A+VT +SS+ LLY YCS+LP D Y+K P I+++
Sbjct: 531 SLPCAPLKSSLDDEEFYWVESTRAIVTLSSSIGLLYFYCSRLPSDGYFKPTPRCSINQDM 590
Query: 70 GQCLLKLPTNCPIPRVIV 17
G C + P +CPI V V
Sbjct: 591 GTCTIYHPKSCPIQTVSV 608
Score = 164 bits (415), Expect(2) = e-121
Identities = 80/152 (52%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQ+E E+A +QNTI +L+TG+GKT+IA MLL+ + H +RKP AVFLVP
Sbjct: 25 RSYQIEALEKAIKQNTIVFLETGSGKTLIAIMLLRYYAHLLRKPSPFIAVFLVPKVVLVP 84
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+K+HTDLKVG YWG MGVD WD W +E +EV VMTP I L+ LRHSFF D
Sbjct: 85 QQAEAVKMHTDLKVGTYWGDMGVDFWDAATWRKEQDKHEVLVMTPAILLNGLRHSFFKLD 144
Query: 1394 GLRVLIFDECHHARKNHP--CIRFIMHEKKTR 1305
++VLIFDECHHAR P CI + ++ R
Sbjct: 145 MIKVLIFDECHHARGKDPYACIMKEFYHEQVR 176
>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
Length = 1403
Score = 305 bits (782), Expect(2) = e-120
Identities = 174/430 (40%), Positives = 249/430 (57%), Gaps = 3/430 (0%)
Frame = -3
Query: 1300 AEYPRIFGMTASPVYSKGKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDVKII 1121
A+ PRIFGMTASP+ +KG I LE + +KVYT L +I + K+
Sbjct: 178 AQLPRIFGMTASPIKTKGSSVEFTWKMIRDLENLMHSKVYTCVSEFCLAKYIPFSTPKLK 237
Query: 1120 CYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFCIEE 941
Y IP + LV+ L L++K+ I + + SA SA +++ KLYS FC+ E
Sbjct: 238 IYRHVDIPCTLFVSLVSDLIRLKDKYEDSISKSSLSDLSAGSAXKRLSKLYSSFIFCLSE 297
Query: 940 MGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSE 761
+G+W A A EF + + F GE ++ V++F + PS W
Sbjct: 298 LGVWLAFKAAEFLSSEETDFFSW--GELDVCAQRIVRNFSLGASKVFSAHXPSGSHWSLG 355
Query: 760 DDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM-DCFTH 584
DI V AG+L+ KV L+++L +RD K RCIIFVER IT++V+ + + +
Sbjct: 356 GDIHANVDAGYLTSKVNSLIESLLEYRDLKDLRCIIFVERIITAIVLRSLXNELLPDLSG 415
Query: 583 LTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLP 404
EY G+++ +Q +S+ Q KI+E+FR G VNIIVAT +LEEGLD+Q CN+V+R+D
Sbjct: 416 WKTEYTAGHSSLLQSQSRNVQNKIVEEFRKGVVNIIVATSILEEGLDVQSCNLVIRFDPS 475
Query: 403 KTICSFIQSRGRARMKDSHYLLLVRDGE--QLAQVNRLLGGEKQMREAALQNDRVKSVSK 230
T+CSFIQSRGRARM++SH++L+V G+ L ++ + + MR+ +L++ +
Sbjct: 476 ATVCSFIQSRGRARMQNSHFILMVGSGDASTLTRMQNYMQSGEIMRQESLRHASIPCSPL 535
Query: 229 SVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKL 50
L E YY VE TGAVVT +SSV+LLY YCS+LP D YYK P I+KE C L L
Sbjct: 536 DDELHDEPYYKVETTGAVVTLSSSVSLLYFYCSRLPSDGYYKPSPRCAIEKETETCTLYL 595
Query: 49 PTNCPIPRVI 20
P NCP+ +VI
Sbjct: 596 PKNCPLQKVI 605
Score = 154 bits (389), Expect(2) = e-120
Identities = 74/138 (53%), Positives = 95/138 (68%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E A ++NTI YL+TG+GKT+IA MLL+++ + +RKP AVFLVP
Sbjct: 23 RSYQLEALETALKRNTIVYLETGSGKTLIAIMLLRSYAYLLRKPSPYIAVFLVPTVVLVA 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
L +HTDLKVG+YWG MGVD WD W++++ +EV VMTP I L LRHSF +
Sbjct: 83 QQGDALIMHTDLKVGKYWGEMGVDYWDAATWQKQVVDHEVLVMTPAILLAALRHSFLKIE 142
Query: 1394 GLRVLIFDECHHARKNHP 1341
++VLIFDECH+AR HP
Sbjct: 143 MIKVLIFDECHNARGKHP 160
>ref|NP_566199.4| endoribonuclease Dicer-like 2 [Arabidopsis thaliana]
gi|334185051|ref|NP_001189798.1| endoribonuclease
Dicer-like 2 [Arabidopsis thaliana]
gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName:
Full=Endoribonuclease Dicer homolog 2; AltName:
Full=Dicer-like protein 2; Short=AtDCL2
gi|332640403|gb|AEE73924.1| endoribonuclease Dicer-like 2
[Arabidopsis thaliana] gi|332640405|gb|AEE73926.1|
endoribonuclease Dicer-like 2 [Arabidopsis thaliana]
Length = 1388
Score = 295 bits (755), Expect(2) = e-119
Identities = 170/432 (39%), Positives = 256/432 (59%), Gaps = 4/432 (0%)
Frame = -3
Query: 1306 GMAEYPRIFGMTASPVYSKGKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDVK 1127
G + PRIFGMTAS V +KG+ +I LE +++KVYT ++ +VL F+ +
Sbjct: 178 GTSNVPRIFGMTASLVKTKGENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPS 237
Query: 1126 IICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFCI 947
Y+ IP LV KL L KH + L+++ S+ DS E+++ ++ S L +C+
Sbjct: 238 FKYYQHIKIPSPKRASLVEKLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCL 297
Query: 946 EEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTWH 767
+++GI A A + ++ + F GE N+ VK F D+ +P + W
Sbjct: 298 DDLGILLAQKAAQSLSASQNDSFLW--GELNMFSVALVKKFCSDASQEFLAEIPQGLNW- 354
Query: 766 SEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM--DC 593
S +I +AG L+LK L++TL + + RCIIFV+R IT++V+ +L + +C
Sbjct: 355 SVANINGNAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNC 414
Query: 592 FTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRY 413
T +Y+ GN + +Q ++++ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+
Sbjct: 415 NNWKT-KYVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRF 473
Query: 412 DLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ--VNRLLGGEKQMREAALQNDRVKS 239
D ICSFIQSRGRARM++S YL++V G+ L Q + + L G K+MRE +L + V
Sbjct: 474 DPASNICSFIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPC 533
Query: 238 VSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCL 59
D E + VE TGA VT +SSV+L+YHYCS+LP D Y+K P F ++K+ G C
Sbjct: 534 PPLPDDSD-EPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCT 592
Query: 58 LKLPTNCPIPRV 23
L LP +CP+ V
Sbjct: 593 LYLPKSCPVKEV 604
Score = 163 bits (412), Expect(2) = e-119
Identities = 80/154 (51%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQ+E E+A +QNTI +L+TG+GKT+IA MLL+++ + RKP + VFLVP
Sbjct: 25 RSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQVVLVT 84
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
LK+HTDLKVG YWG MGVD WD W+QE+ YEV VMTP I LD LRHSF +
Sbjct: 85 QQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHSFLSLS 144
Query: 1394 GLRVLIFDECHHARKNHP--CIRFIMHEKKTRYG 1299
++VLI DECHHA HP CI + K+ G
Sbjct: 145 MIKVLIVDECHHAGGKHPYACIMREFYHKELNSG 178
>gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
Length = 1386
Score = 295 bits (754), Expect(2) = e-119
Identities = 170/432 (39%), Positives = 255/432 (59%), Gaps = 4/432 (0%)
Frame = -3
Query: 1306 GMAEYPRIFGMTASPVYSKGKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDVK 1127
G + PRIFGMTAS V +KG+ +I LE +++KVYT ++ +VL F+ +
Sbjct: 176 GTSNVPRIFGMTASLVKTKGENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPS 235
Query: 1126 IICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFCI 947
Y+ IP LV KL L KH + L+++ S+ DS E+++ ++ S L +C+
Sbjct: 236 FKYYQHIKIPSPKRASLVEKLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCL 295
Query: 946 EEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTWH 767
+++GI A A + ++ + F GE N+ VK F D+ +P + W
Sbjct: 296 DDLGILLAQKAAQSLSASQNDSFLW--GELNMFSVALVKKFCSDASQEFLAEIPQGLNW- 352
Query: 766 SEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM--DC 593
S +I +AG L+LK L++TL + + RCIIFV+R IT++V+ +L + +C
Sbjct: 353 SVANINGNAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNC 412
Query: 592 FTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRY 413
T +Y+ GN + +Q ++++ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+
Sbjct: 413 NNWKT-KYVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRF 471
Query: 412 DLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQVN--RLLGGEKQMREAALQNDRVKS 239
D ICSFIQSRGRARM++S YL++V G+ L Q + L G K+MRE +L + V
Sbjct: 472 DPASNICSFIQSRGRARMQNSDYLMMVESGDLLTQSRSMKYLSGGKRMREESLDHSLVPC 531
Query: 238 VSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCL 59
D E + VE TGA VT +SSV+L+YHYCS+LP D Y+K P F ++K+ G C
Sbjct: 532 PPLPDDSD-EPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCT 590
Query: 58 LKLPTNCPIPRV 23
L LP +CP+ V
Sbjct: 591 LYLPKSCPVKEV 602
Score = 163 bits (412), Expect(2) = e-119
Identities = 80/154 (51%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQ+E E+A +QNTI +L+TG+GKT+IA MLL+++ + RKP + VFLVP
Sbjct: 23 RSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQVVLVT 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
LK+HTDLKVG YWG MGVD WD W+QE+ YEV VMTP I LD LRHSF +
Sbjct: 83 QQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHSFLSLS 142
Query: 1394 GLRVLIFDECHHARKNHP--CIRFIMHEKKTRYG 1299
++VLI DECHHA HP CI + K+ G
Sbjct: 143 MIKVLIVDECHHAGGKHPYACIMREFYHKELNSG 176
>gb|EOY09713.1| Dicer-like protein isoform 4, partial [Theobroma cacao]
Length = 970
Score = 286 bits (731), Expect(2) = e-119
Identities = 169/439 (38%), Positives = 256/439 (58%), Gaps = 5/439 (1%)
Frame = -3
Query: 1318 KKRQGMAEYPRIFGMTASPVYSKGKCFTECITE-ISSLEITLDAKVYTLKDITVLEAFIS 1142
K G+++ PRIFGMTASP+ SK + + I LE +++KVYT +VL F+
Sbjct: 157 KLEAGVSDLPRIFGMTASPIKSKAASPVDSYWQKIHELETIMNSKVYTCISESVLAQFVP 216
Query: 1141 YPDVKIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSL 962
+ K YE IPY + LV +L L KH +E L+++ S+ +S +K+ K++S
Sbjct: 217 FSTPKFKFYEHMEIPYVLYARLVEELNVL--KHECSLEILDLEASATESTRKKMSKIHSA 274
Query: 961 LHFCIEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPS 782
L C++E+G+W A A E+ + F L G+ ++ VK++ + + +PS
Sbjct: 275 LVHCLDELGVWLALKAAEY-LSCYESDFLLG-GKLGVVGEKIVKNYSLVACQLFETRIPS 332
Query: 781 EMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQS 602
W ++++ +V AG L+ KV L+++L +R+ K RCIIFVER +T++V+ +L
Sbjct: 333 GPDWTIANNVKASVDAGLLTTKVFCLIESLFEYRELKDIRCIIFVERVMTAIVLQSLLSE 392
Query: 601 M-DCFTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNI 425
+ +Y+ GN + + ++++ Q +I+E+FR G VNIIVAT +LEEGLD+Q CN+
Sbjct: 393 LLRKHNSWKTKYIAGNNSGLHSQTRKKQNEIVEEFRKGMVNIIVATSILEEGLDVQSCNL 452
Query: 424 VVRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ---VNRLLGGEKQMREAALQN 254
V+R+D T+CSFIQSRGRARM++S YLLLV+ G+ N L G+ +E+
Sbjct: 453 VIRFDPSATVCSFIQSRGRARMQNSDYLLLVKSGDFFTHSRLKNYLASGDIMRKESLCHA 512
Query: 253 DRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKE 74
S ++ L D E Y TGA VT +SSV L++ YCS+LP D Y+K P IDKE
Sbjct: 513 SHACSPLRNHLYD-EEVYRFASTGACVTLSSSVGLIHFYCSRLPADGYFKPTPRCVIDKE 571
Query: 73 GGQCLLKLPTNCPIPRVIV 17
G C L LP +CPI V V
Sbjct: 572 KGVCTLYLPKSCPIQTVCV 590
Score = 170 bits (431), Expect(2) = e-119
Identities = 82/154 (53%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E+A +QNTI YL+TG+GKT+IA MLL+++ H +RKP AVFLVP
Sbjct: 8 RSYQLEALEKAIKQNTITYLETGSGKTLIAIMLLRSYGHLLRKPSPFCAVFLVPQVVLVK 67
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+++HTDL VG+YWG M VD WD +W+QE++ YEV VMTPQI L+ LRHSFF +
Sbjct: 68 QQADAVEMHTDLNVGKYWGEMDVDFWDAAKWKQEIEKYEVLVMTPQILLNGLRHSFFKIN 127
Query: 1394 GLRVLIFDECHHARKNHP--CIRFIMHEKKTRYG 1299
++VLI DECHHAR HP CI + K G
Sbjct: 128 MIKVLIIDECHHARGKHPYACIMTEFYHHKLEAG 161
>ref|XP_006300010.1| hypothetical protein CARUB_v10016233mg, partial [Capsella rubella]
gi|482568719|gb|EOA32908.1| hypothetical protein
CARUB_v10016233mg, partial [Capsella rubella]
Length = 1392
Score = 289 bits (740), Expect(2) = e-118
Identities = 173/438 (39%), Positives = 258/438 (58%), Gaps = 4/438 (0%)
Frame = -3
Query: 1306 GMAEYPRIFGMTASPVYSKGKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDVK 1127
G + PRIFGMTAS V +KG+ +I LE +++KVYT ++ +VL F+ +
Sbjct: 178 GTPDLPRIFGMTASLVKTKGENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPS 237
Query: 1126 IICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFCI 947
Y+ +P LV KL L KH + L++ S+ S E+++ K+ S L +C+
Sbjct: 238 FKFYQRTEVPSPERASLVEKLKKLTIKHRLSLATLDLKSSTVGSIEKRLSKIGSTLTYCL 297
Query: 946 EEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTWH 767
+++GI A A + ++ N F L GE ++ VK F D+L +P + W
Sbjct: 298 DDLGILLAQKAAQSLSASQ-NDFFL-WGELDMSSVTLVKKFCSDALQAFLAHIPHGLNW- 354
Query: 766 SEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM--DC 593
S +I+ V+AG L+ K LV+TL + + RCIIFV+R IT++V+ +L + +C
Sbjct: 355 SVANIKGNVEAGLLTSKTLCLVETLIGYSSLENIRCIIFVDRVITAIVLESLLAEILPNC 414
Query: 592 FTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRY 413
T +Y+ GN + +Q ++++ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+
Sbjct: 415 NNWKT-KYVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRF 473
Query: 412 DLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ--VNRLLGGEKQMREAALQNDRVKS 239
D ICSFIQSRGRARM++S YL++V G+ Q + R L G K+MRE +L + V
Sbjct: 474 DPVSNICSFIQSRGRARMQNSDYLMMVESGDLSTQSRLKRYLSGGKRMREESLHHSLVPC 533
Query: 238 VSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCL 59
D E + VE TGA VT +SSV+L+YHYCS+LP D Y+K P F+++K+ G
Sbjct: 534 PPLPDDSD-EPSFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFELNKDQGSYT 592
Query: 58 LKLPTNCPIPRVIVHECG 5
L LP +CP+ V H G
Sbjct: 593 LYLPKSCPVKEVKGHANG 610
Score = 165 bits (417), Expect(2) = e-118
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQ+E E+A QNTI +L+TG+GKT++A MLL+++ + RKP ++VFLVP
Sbjct: 25 RSYQVEALEKAINQNTIVFLETGSGKTLVAIMLLRSYAYLFRKPSPCFSVFLVPQVVLVT 84
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
LK+HTDL+VG YWG MGVD W W+Q++ YEV VMTP I LD LRHSF NF
Sbjct: 85 QQAEALKMHTDLQVGMYWGDMGVDFWSSSTWQQQVDKYEVLVMTPAILLDALRHSFLNFS 144
Query: 1394 GLRVLIFDECHHARKNHP--CIRFIMHEKKTRYG 1299
++VLI DECHHAR HP CI + K+ G
Sbjct: 145 MIKVLIVDECHHARGKHPYACIMREFYHKELNSG 178
>ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
gi|223545861|gb|EEF47364.1| ATP binding protein, putative
[Ricinus communis]
Length = 1388
Score = 278 bits (712), Expect(2) = e-118
Identities = 164/430 (38%), Positives = 248/430 (57%), Gaps = 5/430 (1%)
Frame = -3
Query: 1291 PRIFGMTASPVYSKG-KCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDVKIICY 1115
PRIFGMTASP+ SKG K TEI LE + +KVYT +VL FI + K Y
Sbjct: 168 PRIFGMTASPIKSKGAKSELAYWTEIRELENIMYSKVYTCASESVLAEFIPFSTPKFKFY 227
Query: 1114 ESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFCIEEMG 935
+ IPY + L L L+ K+ ++ L++ ++ +S ++I K++S L +C++E+G
Sbjct: 228 KPMDIPYAIYASLAENLKILKSKYECNLKLLDLTDAVVESTSKRISKMHSTLMYCLDELG 287
Query: 934 IWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDD 755
+W A A + + F + G+ +I N VK F ++ + S W ++
Sbjct: 288 VWLALKAAQILSCHESEFF--SCGKLDISGENIVKEFGLNASQALDNCINSGPKWSIGEN 345
Query: 754 IEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM--DCFTHL 581
E ++AG L+ K+ L+D+L +RD + RCIIFV R I ++V+ +L + +
Sbjct: 346 AEADIEAGLLTTKIFCLIDSLLDYRDIRDLRCIIFVNRVIAAIVLQTLLGELLPRYNSGW 405
Query: 580 TIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPK 401
+Y+ GN +Q +S++ Q +I+E+FR GKVNIIVAT +LEEGLD+Q CN+VVR+D
Sbjct: 406 KTQYIAGNNFRLQSQSRKTQNEIVEEFREGKVNIIVATSILEEGLDVQSCNLVVRFDPST 465
Query: 400 TICSFIQSRGRARMKDSHYLLLVRDGE--QLAQVNRLLGGEKQMREAALQNDRVKSVSKS 227
T+ SFIQSRGRARM++S YLL+V+ G+ +++ L MR+ ++++ V
Sbjct: 466 TVSSFIQSRGRARMQNSDYLLMVKSGDVSTHSRLENYLASGDLMRKESIRHGSVPCSPIR 525
Query: 226 VLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLP 47
YY VE T A+VT SSV+L+Y YCS+LP D Y+K P IDKE +C L LP
Sbjct: 526 SEFHEGEYYFVESTNALVTLTSSVSLIYFYCSRLPSDGYFKPTPRCLIDKEMERCTLLLP 585
Query: 46 TNCPIPRVIV 17
+C I + V
Sbjct: 586 KSCSIHTISV 595
Score = 175 bits (443), Expect(2) = e-118
Identities = 83/151 (54%), Positives = 104/151 (68%), Gaps = 2/151 (1%)
Frame = -2
Query: 1748 YQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXXXX 1569
YQLE E+A QQNTI +L+TG+GKT+IA MLL+++ H +RKP AVFLVP
Sbjct: 12 YQLEALEKAIQQNTIVFLETGSGKTLIAIMLLRSYAHLLRKPSPFIAVFLVPQVVLVKQQ 71
Query: 1568 XXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFDGL 1389
++ HTDL VG+YWG MGVD WD W+Q+++ YEV VMTPQI LD LRHSFF D +
Sbjct: 72 AEAVETHTDLTVGKYWGEMGVDFWDAGSWKQQIEQYEVLVMTPQILLDGLRHSFFKLDCI 131
Query: 1388 RVLIFDECHHARKNHP--CIRFIMHEKKTRY 1302
+VLIFDECHHAR HP CI + ++ Y
Sbjct: 132 KVLIFDECHHARGKHPYACILTEFYHRQLTY 162
>ref|XP_006480493.1| PREDICTED: endoribonuclease Dicer homolog 2-like isoform X6 [Citrus
sinensis]
Length = 1396
Score = 291 bits (746), Expect(2) = e-117
Identities = 166/434 (38%), Positives = 255/434 (58%), Gaps = 5/434 (1%)
Frame = -3
Query: 1306 GMAEYPRIFGMTASPVYSK-GKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDV 1130
G + PRIFGMTASP+ SK + +I LE +++KVYT +VL FI +
Sbjct: 176 GDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTA 235
Query: 1129 KIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFC 950
K Y+ + IP+ + L +L ++ KH + +ENL+++E+ A+ +K+ K+ S L +C
Sbjct: 236 KFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
Query: 949 IEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTW 770
+ E+G+W A A E + + F + + +K F D+ +PS W
Sbjct: 296 LSELGVWLALKAAETISCYESDFFAWE--QLDGFGETIIKKFGSDASQALVTYVPSGAEW 353
Query: 769 HSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSMDCF 590
DD + + +G L+ K+ L+++L +R + RCIIFVER IT++V+ +L +
Sbjct: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LP 412
Query: 589 THLT--IEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVR 416
H T +Y+ GN + IQ +S++ Q +I+E+FR G VN+IVAT +LEEGLD+Q CN+V+
Sbjct: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
Query: 415 YDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ--VNRLLGGEKQMREAALQNDRVK 242
+D +T+CSFIQSRGRARM++S YLL+V+ G+ Q + L +MR+ L + +
Sbjct: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
Query: 241 SVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQC 62
+ + E +Y VE TG + T +SSV+L+Y YCS+LP D Y+K P F I+KE G C
Sbjct: 533 CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGIC 592
Query: 61 LLKLPTNCPIPRVI 20
L LP NCPI VI
Sbjct: 593 TLYLPNNCPIQTVI 606
Score = 160 bits (405), Expect(2) = e-117
Identities = 75/137 (54%), Positives = 96/137 (70%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E A +QNTI +L+TG+GKT+IA MLL+++ + +RKP AVFLVP
Sbjct: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+K+HTDLKVG+YWG MGVD WD W++E+ +EV VMTPQI LD LR S+F +
Sbjct: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
Query: 1394 GLRVLIFDECHHARKNH 1344
++VLI DECHHAR H
Sbjct: 143 MIKVLILDECHHARGKH 159
>ref|XP_006428679.1| hypothetical protein CICLE_v10010912mg [Citrus clementina]
gi|557530736|gb|ESR41919.1| hypothetical protein
CICLE_v10010912mg [Citrus clementina]
Length = 1396
Score = 291 bits (746), Expect(2) = e-117
Identities = 166/434 (38%), Positives = 255/434 (58%), Gaps = 5/434 (1%)
Frame = -3
Query: 1306 GMAEYPRIFGMTASPVYSK-GKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDV 1130
G + PRIFGMTASP+ SK + +I LE +++KVYT +VL FI +
Sbjct: 176 GDSNLPRIFGMTASPIKSKVSSSEQDYWQKIHDLETLMNSKVYTCASESVLSNFIPFSTA 235
Query: 1129 KIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFC 950
K Y+ + IP+ + L +L ++ KH + +ENL+++E+ A+ +K+ K+ S L +C
Sbjct: 236 KFKFYKYDEIPHALYTHLADELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYC 295
Query: 949 IEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTW 770
+ E+G+W A A E + + F + + +K F D+ +PS W
Sbjct: 296 LSELGVWLALKAAETISCYESDFFAWE--QLDGFGETIIKKFGSDASQALVTYVPSGAEW 353
Query: 769 HSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSMDCF 590
DD + + +G L+ K+ L+++L +R + RCIIFVER IT++V+ +L +
Sbjct: 354 SIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCIIFVERVITAIVLQSLLSEL-LP 412
Query: 589 THLT--IEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVR 416
H T +Y+ GN + IQ +S++ Q +I+E+FR G VN+IVAT +LEEGLD+Q CN+V+
Sbjct: 413 RHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIM 472
Query: 415 YDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ--VNRLLGGEKQMREAALQNDRVK 242
+D +T+CSFIQSRGRARM++S YLL+V+ G+ Q + L +MR+ L + +
Sbjct: 473 FDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSRLENYLASGNKMRKEVLSHASLP 532
Query: 241 SVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQC 62
+ + E +Y VE TG + T +SSV+L+Y YCS+LP D Y+K P F I+KE G C
Sbjct: 533 CSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCSRLPSDGYFKPTPKFHINKEMGIC 592
Query: 61 LLKLPTNCPIPRVI 20
L LP NCPI VI
Sbjct: 593 TLYLPNNCPIQTVI 606
Score = 160 bits (405), Expect(2) = e-117
Identities = 75/137 (54%), Positives = 96/137 (70%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E A +QNTI +L+TG+GKT+IA MLL+++ + +RKP AVFLVP
Sbjct: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+K+HTDLKVG+YWG MGVD WD W++E+ +EV VMTPQI LD LR S+F +
Sbjct: 83 QQAEAIKMHTDLKVGKYWGDMGVDFWDGATWKEEMSKHEVLVMTPQILLDGLRLSYFKLN 142
Query: 1394 GLRVLIFDECHHARKNH 1344
++VLI DECHHAR H
Sbjct: 143 MIKVLILDECHHARGKH 159
>ref|XP_002315119.1| hypothetical protein POPTR_0010s18870g [Populus trichocarpa]
gi|222864159|gb|EEF01290.1| hypothetical protein
POPTR_0010s18870g [Populus trichocarpa]
Length = 1408
Score = 291 bits (744), Expect(2) = e-117
Identities = 172/436 (39%), Positives = 252/436 (57%), Gaps = 4/436 (0%)
Frame = -3
Query: 1312 RQGMAEYPRIFGMTASPVYSKGKCFTECITE-ISSLEITLDAKVYTLKDITVLEAFISYP 1136
R G + PRIFGMTAS + SKG + I LE +++KVYT TVL FI P
Sbjct: 174 RSGHHDLPRIFGMTASLIKSKGANSESYYRQQICELENIMNSKVYTCASETVLAEFIPSP 233
Query: 1135 DVKIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLH 956
+ + YE IP + L +L L+ KH ++ L++ ES+A+S KI K++S L
Sbjct: 234 AAEFLFYEPMKIPDGIYACLEEELGNLKAKHELLLKQLDLSESAAESVHSKISKVHSALM 293
Query: 955 FCIEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEM 776
FC E+G+W A A F + + + G+ ++ VK F D+ +E
Sbjct: 294 FCSGELGVWLAFQAARFLSHSDTDSDFIAWGKVDVSGETIVKKFCWDASLVISNCFSAEC 353
Query: 775 TWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM- 599
D+ E V AG ++ KV L+ TL +RD K RCI+FVER IT+VV+ +L+ +
Sbjct: 354 C--IGDNTEADVGAGLITAKVLCLIKTLLQYRDLKDIRCIVFVERVITAVVLESLLRELL 411
Query: 598 DCFTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVV 419
+ +Y+ GN + +Q ++++ Q +I+E+FR G VNIIVAT +LEEGLD+Q CN+V+
Sbjct: 412 PKHSSWKTKYIAGNNSGLQSQTRQMQNEIVEEFRKGMVNIIVATSILEEGLDVQSCNLVI 471
Query: 418 RYDLPKTICSFIQSRGRARMKDSHYLLLVR--DGEQLAQVNRLLGGEKQMREAALQNDRV 245
R+D P ++ SFIQSRGRARM++S YLL+V+ D +++ L + MR +L+
Sbjct: 472 RFDPPSSVSSFIQSRGRARMQNSDYLLMVKTEDSTTHSRLENYLSSSEIMRRESLRRSST 531
Query: 244 KSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQ 65
+ L + +Y+VE TGAVVT +SSV+L+Y YCS+LP D Y+K PI IDKE
Sbjct: 532 SCSAPQSELYEDEFYSVEGTGAVVTLSSSVSLIYFYCSRLPSDGYFKPAPICIIDKEKET 591
Query: 64 CLLKLPTNCPIPRVIV 17
C L LP + PI + V
Sbjct: 592 CTLHLPKSSPIQNICV 607
Score = 160 bits (405), Expect(2) = e-117
Identities = 78/154 (50%), Positives = 102/154 (66%), Gaps = 2/154 (1%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E+A +QNTI +L+TG+GKT+IATMLL+++ H +RKP + AVFLVP
Sbjct: 23 RSYQLEALEQALKQNTIVFLETGSGKTLIATMLLRSYAHLLRKPSRFIAVFLVPEVFLVR 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+++HTDL VG YWG MG+D W+QE+ +EV VMT QI L+ LR +F D
Sbjct: 83 QQAGVVRMHTDLNVGMYWGDMGIDFSHAATWKQEIDKHEVLVMTHQILLNGLRQGYFKLD 142
Query: 1394 GLRVLIFDECHHARKNHP--CIRFIMHEKKTRYG 1299
++VLIFDECHHAR NHP CI ++ R G
Sbjct: 143 FIKVLIFDECHHARGNHPYACIMTEFFHRELRSG 176
>ref|XP_006408318.1| hypothetical protein EUTSA_v10019898mg [Eutrema salsugineum]
gi|557109464|gb|ESQ49771.1| hypothetical protein
EUTSA_v10019898mg [Eutrema salsugineum]
Length = 1390
Score = 291 bits (745), Expect(2) = e-117
Identities = 172/429 (40%), Positives = 257/429 (59%), Gaps = 6/429 (1%)
Frame = -3
Query: 1291 PRIFGMTASPVYSKGKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDVKIICYE 1112
PRI GMTAS V +KG +I LE +++KVYT ++ +VL F+ + Y+
Sbjct: 181 PRILGMTASLVKTKGAKLDSYWEKIHELETLMNSKVYTCENESVLAEFVPFSTPSFKYYK 240
Query: 1111 SNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFCIEEMGI 932
IP LV KL L KH + NL++ S+ DS E+++RK+ S L +C+ ++GI
Sbjct: 241 HIEIPTSKRASLVGKLENLITKHRLSLANLDLKSSTVDSIEKRMRKIISCLTYCLSDLGI 300
Query: 931 WAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDI 752
W A A + ++ + F L GE N+ VK F D+ +P + W S +I
Sbjct: 301 WLAQKAAQSLSDSQSD-FTL-WGELNMFSETFVKKFCFDASQAFLADIPHGLNW-SAANI 357
Query: 751 EKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKIL-QSMDCFTHLTI 575
++ ++AG L+ K L+++L + + RCIIFV+R IT++V+ +L + + +
Sbjct: 358 KENLEAGLLTSKTVCLLESLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNYNSWKT 417
Query: 574 EYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTI 395
+Y+ GN + +Q ++++ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+D I
Sbjct: 418 KYVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNI 477
Query: 394 CSFIQSRGRARMKDSHYLLLVRDGEQLAQVNRL---LGGEKQMREAALQNDRVKSVSKSV 224
CSFIQSRGRARM +S YL++V G+ LA ++RL L G K+MRE +L + V
Sbjct: 478 CSFIQSRGRARMLNSDYLMMVESGD-LATIDRLMKYLSGGKRMREESLHHSLVPC---QP 533
Query: 223 LLD--PESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKL 50
LD E Y V+KTGA VT +SSV+L+Y YCS+LP D Y+K P F +DK+ G C + L
Sbjct: 534 FLDDSSEKIYRVDKTGASVTLSSSVSLIYFYCSRLPSDEYFKPAPRFDVDKDQGICTVYL 593
Query: 49 PTNCPIPRV 23
P +CP+ V
Sbjct: 594 PKSCPVKEV 602
Score = 158 bits (400), Expect(2) = e-117
Identities = 75/138 (54%), Positives = 94/138 (68%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQ+E E+A +QNTI +L+TG+GKT+IA MLL+ + + RKP ++VFLVP
Sbjct: 23 RSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRNYAYLFRKPSPCFSVFLVPQVVLVT 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
LK+HTDLKVG YWG MGVD WD W+QE+ YEV VMTP I L LRHSF +
Sbjct: 83 QQAEALKMHTDLKVGMYWGEMGVDFWDSSIWKQEVDKYEVLVMTPAILLVALRHSFLTLN 142
Query: 1394 GLRVLIFDECHHARKNHP 1341
++VLI DECHHA+ HP
Sbjct: 143 MIKVLIVDECHHAKGKHP 160
>gb|EXB88160.1| Endoribonuclease Dicer-2-like protein [Morus notabilis]
Length = 1429
Score = 281 bits (719), Expect(2) = e-115
Identities = 163/434 (37%), Positives = 252/434 (58%), Gaps = 4/434 (0%)
Frame = -3
Query: 1312 RQGMAEYPRIFGMTASPVYSK-GKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYP 1136
R G+ + PRIFGMTASP+ SK GK I LE +++KVYT +V+ FI
Sbjct: 174 RSGVTDLPRIFGMTASPIKSKVGKAEIAFWVHIQELETLMNSKVYTCASESVIAEFIPIS 233
Query: 1135 DVKIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLH 956
K Y I D L +L LQEKH +E L++D+S+A+S +K+ K+YS L
Sbjct: 234 TPKFRYYRHEEITDDCFVSLADQLKSLQEKHELSLEKLDLDKSAAESISKKLMKVYSALL 293
Query: 955 FCIEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEM 776
FC++E+G+W A A +F L+ G+ ++ VK F D+ + + +LP++
Sbjct: 294 FCLDELGVWLAMKAA-LSFSCNEIEF-LSWGKVDVFGEAIVKKFSLDAFNAFKNSLPTDP 351
Query: 775 TWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM- 599
W +D++ + G L+ KV L++ L +R K RCI+FV+R +T+VVI +L +
Sbjct: 352 NWSIINDVKLNMSTGLLTAKVFCLIELLLEYRHLKDLRCIVFVQRIVTAVVIQSLLSELL 411
Query: 598 DCFTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVV 419
+ +Y+ G++ +Q ++++ Q +I+ +FR G VNIIVAT +LEEGLD+Q CN+VV
Sbjct: 412 PKRINWKAKYIAGSSNNMQSQTRKKQNEIVGEFREGVVNIIVATSILEEGLDVQSCNLVV 471
Query: 418 RYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ--VNRLLGGEKQMREAALQNDRV 245
R+D T+CSFIQSRGRAR K+S Y+L++ G+ Q + L + MR+ +L++ +
Sbjct: 472 RFDPSSTVCSFIQSRGRARKKNSDYVLMIESGDHSTQSRLKNYLASGEIMRKESLRHASL 531
Query: 244 KSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQ 65
L +Y VE TGA++T +SS+ L+Y YCS+LP D Y+K P + ++
Sbjct: 532 PCEPLDSDLQEGDFYCVESTGAIMTLSSSINLIYFYCSRLPSDGYFKPTPRWDLNTG--- 588
Query: 64 CLLKLPTNCPIPRV 23
L LP +CPI V
Sbjct: 589 -TLYLPKSCPIQAV 601
Score = 164 bits (416), Expect(2) = e-115
Identities = 78/138 (56%), Positives = 95/138 (68%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E +QNTI +L+TG+GKT+IA MLL+++ H +RKP +VFLVP
Sbjct: 23 RSYQLEALESGIKQNTIVFLETGSGKTLIAIMLLRSYAHLLRKPSPFISVFLVPQVVLVP 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
L++HTDLKVG YWG GVD WD W EL+ +EV VMTPQI L+NLRHSFF
Sbjct: 83 QQAKALEMHTDLKVGTYWGEKGVDNWDANMWNVELEKHEVLVMTPQILLNNLRHSFFKLS 142
Query: 1394 GLRVLIFDECHHARKNHP 1341
++VLI DECHHAR NHP
Sbjct: 143 MIKVLIVDECHHARGNHP 160
>gb|EOY09710.1| Dicer-like protein isoform 1 [Theobroma cacao]
Length = 1418
Score = 274 bits (701), Expect(2) = e-115
Identities = 169/459 (36%), Positives = 257/459 (55%), Gaps = 25/459 (5%)
Frame = -3
Query: 1318 KKRQGMAEYPRIFGMTASPVYSKGKCFTECITE-ISSLEITLDAK----------VYTLK 1172
K G+++ PRIFGMTASP+ SK + + I LE +++K VYT
Sbjct: 172 KLEAGVSDLPRIFGMTASPIKSKAASPVDSYWQKIHELETIMNSKCLHSMFSPLKVYTCI 231
Query: 1171 DITVLEAFISYPDVKIICYESNIIPYDVVKDLVAKLYYLQEK----------HMQFIENL 1022
+VL F+ + K YE IPY + LV +L L+ K H +E L
Sbjct: 232 SESVLAQFVPFSTPKFKFYEHMEIPYVLYARLVEELNVLKVKDTDSRCTAFQHECSLEIL 291
Query: 1021 EMDESSADSAERKIRKLYSLLHFCIEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVT 842
+++ S+ +S +K+ K++S L C++E+G+W A A E+ + F L G+ ++
Sbjct: 292 DLEASATESTRKKMSKIHSALVHCLDELGVWLALKAAEY-LSCYESDFLLG-GKLGVVGE 349
Query: 841 NAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQR 662
VK++ + + +PS W ++++ +V AG L+ KV L+++L +R+ K R
Sbjct: 350 KIVKNYSLVACQLFETRIPSGPDWTIANNVKASVDAGLLTTKVFCLIESLFEYRELKDIR 409
Query: 661 CIIFVERKITSVVISKILQSM-DCFTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKV 485
CIIFVER +T++V+ +L + +Y+ GN + + ++++ Q +I+E+FR G V
Sbjct: 410 CIIFVERVMTAIVLQSLLSELLRKHNSWKTKYIAGNNSGLHSQTRKKQNEIVEEFRKGMV 469
Query: 484 NIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ- 308
NIIVAT +LEEGLD+Q CN+V+R+D T+CSFIQSRGRARM++S YLLLV+ G+
Sbjct: 470 NIIVATSILEEGLDVQSCNLVIRFDPSATVCSFIQSRGRARMQNSDYLLLVKSGDFFTHS 529
Query: 307 --VNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYC 134
N L G+ +E+ S ++ L D E Y TGA VT +SSV L++ YC
Sbjct: 530 RLKNYLASGDIMRKESLCHASHACSPLRNHLYD-EEVYRFASTGACVTLSSSVGLIHFYC 588
Query: 133 SQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIV 17
S+LP D Y+K P IDKE G C L LP +CPI V V
Sbjct: 589 SRLPADGYFKPTPRCVIDKEKGVCTLYLPKSCPIQTVCV 627
Score = 170 bits (431), Expect(2) = e-115
Identities = 82/154 (53%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E+A +QNTI YL+TG+GKT+IA MLL+++ H +RKP AVFLVP
Sbjct: 23 RSYQLEALEKAIKQNTITYLETGSGKTLIAIMLLRSYGHLLRKPSPFCAVFLVPQVVLVK 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+++HTDL VG+YWG M VD WD +W+QE++ YEV VMTPQI L+ LRHSFF +
Sbjct: 83 QQADAVEMHTDLNVGKYWGEMDVDFWDAAKWKQEIEKYEVLVMTPQILLNGLRHSFFKIN 142
Query: 1394 GLRVLIFDECHHARKNHP--CIRFIMHEKKTRYG 1299
++VLI DECHHAR HP CI + K G
Sbjct: 143 MIKVLIIDECHHARGKHPYACIMTEFYHHKLEAG 176
>ref|XP_004303843.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Fragaria vesca
subsp. vesca]
Length = 1393
Score = 280 bits (715), Expect(2) = e-115
Identities = 169/436 (38%), Positives = 251/436 (57%), Gaps = 4/436 (0%)
Frame = -3
Query: 1306 GMAEYPRIFGMTASPVYSKG-KCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDV 1130
G ++ PRIFGMTASP+ SKG K I LE +++KVYT TVL F+
Sbjct: 175 GPSDLPRIFGMTASPIKSKGGKQELSYQKAIHELETLMNSKVYTCVSETVLAEFVPTSTP 234
Query: 1129 KIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFC 950
K Y IP + L +L L+EKH I +L+ ESS S +K+ K +S L FC
Sbjct: 235 KFRTYRRWEIPSALYTCLTKQLKNLKEKHELSIRSLDRGESS-QSISKKMMKFFSALTFC 293
Query: 949 IEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTW 770
+EE G+W A+ A + ++ + F + +++ V+ F ++ LPS+ W
Sbjct: 294 LEEFGVWFASKAAWWFSHSETDFFTWE--KLDVMGERIVRSFSLEAYKAFAYFLPSDPNW 351
Query: 769 HSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQS-MDC 593
D+ + GFLS KV L+ L +R RCI+FVER IT+VV+ +L +
Sbjct: 352 TIAGDVTDNMNKGFLSSKVVCLIQLLLEYRGLPNLRCIVFVERVITAVVLESLLNEFLPE 411
Query: 592 FTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRY 413
+Y+ GN + +Q ++++ Q +I+E FRNG VNIIVAT +LEEGLD+Q CN+V+R+
Sbjct: 412 HNDWKSKYIAGNNSGMQSQTRKYQNEIVEGFRNGMVNIIVATSILEEGLDVQSCNLVIRF 471
Query: 412 DLPKTICSFIQSRGRARMKDSHYLLLVRDGE--QLAQVNRLLGGEKQMREAALQNDRVKS 239
D T+CSFIQS+GRARM++S Y+L+V G+ +++ L E MR+ +L++ +
Sbjct: 472 DPCSTVCSFIQSKGRARMENSDYVLMVESGDLNTYSRLQNYLTSEDIMRKESLRHSSLPC 531
Query: 238 VSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCL 59
S + + Y VE TGA +T +SS++L+Y YCS+LP D Y+K P + D+E C+
Sbjct: 532 TSLDIDFQNDGSYRVESTGATLTLDSSISLIYFYCSRLPSDGYFKPAP--RWDEE--TCI 587
Query: 58 LKLPTNCPIPRVIVHE 11
L LP +CPIP VHE
Sbjct: 588 LHLPKSCPIP--FVHE 601
Score = 163 bits (412), Expect(2) = e-115
Identities = 78/150 (52%), Positives = 101/150 (67%), Gaps = 4/150 (2%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE + A ++NTI +L+TG+GKT+IA MLL+++ H +RKP ++FLVP
Sbjct: 22 RSYQLEALDAAIKRNTIVFLETGSGKTLIAIMLLRSYSHMLRKPSPFISIFLVPQVPLVK 81
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+K+HTDL VG YWG +GVD WD W+QE++ YEV VMTP I L+NLRHSFF
Sbjct: 82 QQADAVKMHTDLSVGMYWGDIGVDFWDADMWKQEIEKYEVLVMTPAILLNNLRHSFFKLS 141
Query: 1394 GLRVLIFDECHHARKNHP--CI--RFIMHE 1317
++VLI DEC HAR NHP CI F H+
Sbjct: 142 MIKVLIMDECQHARGNHPYACIMKEFFHHQ 171
>ref|XP_006428678.1| hypothetical protein CICLE_v10010911mg [Citrus clementina]
gi|557530735|gb|ESR41918.1| hypothetical protein
CICLE_v10010911mg [Citrus clementina]
Length = 1401
Score = 283 bits (724), Expect(2) = e-114
Identities = 168/437 (38%), Positives = 254/437 (58%), Gaps = 6/437 (1%)
Frame = -3
Query: 1312 RQGMAEYPRIFGMTASPVYSK-GKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYP 1136
+ G + PRIFGMTASP+ SK + +I LE +++KVYT +VL I +
Sbjct: 174 KAGDSNLPRIFGMTASPIKSKVASSEQDYWQKIHGLETLMNSKVYTCASESVLSNCIPFS 233
Query: 1135 DVKIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLH 956
K Y + IP+ + L L ++ KH + +ENL+++E+ A+S + I ++ S L
Sbjct: 234 TPKFKFYGDDEIPHALYTRLADDLEKIELKHNRSLENLDLNEAQAESIRKNISRIKSTLL 293
Query: 955 FCIEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEM 776
+C+ +G+W A A E K + F + + +K F D+ +PS
Sbjct: 294 YCLNGLGVWLALKAAETLSCYKSDFFAWE--QLDGFGETIMKKFGSDAFQALVTCIPSGA 351
Query: 775 TWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSMD 596
W DD + + +G L+ K+ LV++L +R + RCIIFVER IT++V+ +L +
Sbjct: 352 GWSIGDDSKFNMDSGLLTEKIVCLVESLLEYRGLEDIRCIIFVERVITAIVLQSLLSEL- 410
Query: 595 CFTHLT--IEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIV 422
H T EY+ GN + IQ +S+ Q +I+E+FR G VN+IVAT +LEEGLD+Q CN+V
Sbjct: 411 LPRHCTWKTEYVAGNNSGIQCQSRNKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
Query: 421 VRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ---VNRLLGGEKQMREAALQND 251
+ +D T+CSFIQSRGRARM++S YLL+++ G+ + Q N L+ G+ MR+ AL +
Sbjct: 471 IMFDPSHTVCSFIQSRGRARMQNSDYLLMLKSGDSITQSRLENYLVSGD-TMRKEALSHA 529
Query: 250 RVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEG 71
+ + + E +Y VE +GA+ T +SSV L++ YCS+LP D Y+K P F I+KE
Sbjct: 530 SLPCSPLNNHMYGEDFYHVESSGAIATLSSSVHLIHFYCSRLPSDGYFKPTPKFDINKEM 589
Query: 70 GQCLLKLPTNCPIPRVI 20
G C L LP NCPI VI
Sbjct: 590 GICTLYLPNNCPIQTVI 606
Score = 158 bits (399), Expect(2) = e-114
Identities = 79/152 (51%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E A +QNTI +L+TG+GKT+IA MLL+++ + +RKP AVFLVP
Sbjct: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+K HTDLKVG YWG MG+D WD W++E+ +EV VMTPQI LD LR S+F +
Sbjct: 83 QQAEAIKKHTDLKVGMYWGDMGIDYWDAATWKEEMNKHEVLVMTPQILLDGLRLSYFKLN 142
Query: 1394 GLRVLIFDECHHARKNH--PCI--RFIMHEKK 1311
++VLI DECHHAR H CI F H+ K
Sbjct: 143 MIKVLILDECHHARGKHQYACIMTEFYHHQLK 174
>ref|XP_006480490.1| PREDICTED: endoribonuclease Dicer homolog 2-like isoform X3 [Citrus
sinensis] gi|568853715|ref|XP_006480491.1| PREDICTED:
endoribonuclease Dicer homolog 2-like isoform X4 [Citrus
sinensis] gi|568853717|ref|XP_006480492.1| PREDICTED:
endoribonuclease Dicer homolog 2-like isoform X5 [Citrus
sinensis]
Length = 1401
Score = 282 bits (721), Expect(2) = e-114
Identities = 167/437 (38%), Positives = 254/437 (58%), Gaps = 6/437 (1%)
Frame = -3
Query: 1312 RQGMAEYPRIFGMTASPVYSK-GKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYP 1136
+ G + PRIFGMTASP+ SK + +I LE +++KVYT +VL I +
Sbjct: 174 KAGDSNLPRIFGMTASPIKSKVASSEQDYWQKIHGLETLMNSKVYTCASESVLSNCIPFS 233
Query: 1135 DVKIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLH 956
K Y + IP+ + L L ++ KH + +ENL+++E+ A+S + I ++ S L
Sbjct: 234 TPKFKFYGDDEIPHALYTRLADDLEKIELKHNRSLENLDLNEAQAESIRKNISRIKSTLL 293
Query: 955 FCIEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEM 776
+C+ +G+W A A E K + F + + +K F D+ +PS
Sbjct: 294 YCLNGLGVWLALKAAETISCYKSDFFAWE--QLDGFGETIMKKFGSDAFQALVTYIPSGA 351
Query: 775 TWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSMD 596
W DD + + +G L+ K+ LV++L +R + RCIIFVER +T++V+ +L +
Sbjct: 352 GWSIGDDSKFNMDSGLLTEKIVCLVESLLEYRGLEDIRCIIFVERVVTAIVLQSLLSEL- 410
Query: 595 CFTHLT--IEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIV 422
H T EY+ GN + IQ +S+ Q +I+E+FR G VN+IVAT +LEEGLD+Q CN+V
Sbjct: 411 LPRHCTWKTEYVAGNNSGIQCQSRNKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
Query: 421 VRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ---VNRLLGGEKQMREAALQND 251
+ +D T+CSFIQSRGRARM++S YLL+++ G+ + Q N L+ G+ MR+ AL +
Sbjct: 471 IMFDPSHTVCSFIQSRGRARMQNSDYLLMLKSGDSITQSRLENYLVSGD-TMRKEALSHA 529
Query: 250 RVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEG 71
+ + + E +Y VE +GA+ T +SSV L++ YCS+LP D Y+K P F I+KE
Sbjct: 530 SLPCSPLNNHMYGEDFYHVESSGAIATLSSSVHLIHFYCSRLPSDGYFKPTPKFDINKEM 589
Query: 70 GQCLLKLPTNCPIPRVI 20
G C L LP NCPI VI
Sbjct: 590 GICTLYLPNNCPIQTVI 606
Score = 157 bits (398), Expect(2) = e-114
Identities = 79/152 (51%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E A +QNTI +L+TG+GKT+IA MLL+++ + +RKP AVFLVP
Sbjct: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+K HTDLKVG YWG MG+D WD W++E+ +EV VMTPQI LD LR S+F +
Sbjct: 83 QQAEAIKKHTDLKVGMYWGDMGIDYWDAATWKKEMNKHEVLVMTPQILLDGLRLSYFKLN 142
Query: 1394 GLRVLIFDECHHARKNH--PCI--RFIMHEKK 1311
++VLI DECHHAR H CI F H+ K
Sbjct: 143 MIKVLILDECHHARGKHQYACIMTEFYHHQLK 174
>ref|XP_006480488.1| PREDICTED: endoribonuclease Dicer homolog 2-like isoform X1 [Citrus
sinensis] gi|568853711|ref|XP_006480489.1| PREDICTED:
endoribonuclease Dicer homolog 2-like isoform X2 [Citrus
sinensis]
Length = 1401
Score = 282 bits (721), Expect(2) = e-114
Identities = 167/437 (38%), Positives = 254/437 (58%), Gaps = 6/437 (1%)
Frame = -3
Query: 1312 RQGMAEYPRIFGMTASPVYSK-GKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYP 1136
+ G + PRIFGMTASP+ SK + +I LE +++KVYT +VL I +
Sbjct: 174 KAGDSNLPRIFGMTASPIKSKVASSEQDYWQKIHGLETLMNSKVYTCASESVLSNCIPFS 233
Query: 1135 DVKIICYESNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLH 956
K Y + IP+ + L L ++ KH + +ENL+++E+ A+S + I ++ S L
Sbjct: 234 TPKFKFYGDDEIPHALYTRLADDLEKIELKHNRSLENLDLNEAQAESIRKNISRIKSTLL 293
Query: 955 FCIEEMGIWAAAIACEFHRRTKPNKFGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEM 776
+C+ +G+W A A E K + F + + +K F D+ +PS
Sbjct: 294 YCLNGLGVWLALKAAETISCYKSDFFAWE--QLDGFGETIMKKFGSDAFQALVTYIPSGA 351
Query: 775 TWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSMD 596
W DD + + +G L+ K+ LV++L +R + RCIIFVER +T++V+ +L +
Sbjct: 352 GWSIGDDSKFNMDSGLLTEKIVCLVESLLEYRGLEDIRCIIFVERVVTAIVLQSLLSEL- 410
Query: 595 CFTHLT--IEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIV 422
H T EY+ GN + IQ +S+ Q +I+E+FR G VN+IVAT +LEEGLD+Q CN+V
Sbjct: 411 LPRHCTWKTEYVAGNNSGIQCQSRNKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLV 470
Query: 421 VRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQ---VNRLLGGEKQMREAALQND 251
+ +D T+CSFIQSRGRARM++S YLL+++ G+ + Q N L+ G+ MR+ AL +
Sbjct: 471 IMFDPSHTVCSFIQSRGRARMQNSDYLLMLKSGDSITQSRLENYLVSGD-TMRKEALSHA 529
Query: 250 RVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEG 71
+ + + E +Y VE +GA+ T +SSV L++ YCS+LP D Y+K P F I+KE
Sbjct: 530 SLPCSPLNNHMYGEDFYHVESSGAIATLSSSVHLIHFYCSRLPSDGYFKPTPKFDINKEM 589
Query: 70 GQCLLKLPTNCPIPRVI 20
G C L LP NCPI VI
Sbjct: 590 GICTLYLPNNCPIQTVI 606
Score = 157 bits (398), Expect(2) = e-114
Identities = 79/152 (51%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Frame = -2
Query: 1754 RQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRKPQKNYAVFLVPXXXXXX 1575
R YQLE E A +QNTI +L+TG+GKT+IA MLL+++ + +RKP AVFLVP
Sbjct: 23 RNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSPFVAVFLVPKVVLVP 82
Query: 1574 XXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHSFFNFD 1395
+K HTDLKVG YWG MG+D WD W++E+ +EV VMTPQI LD LR S+F +
Sbjct: 83 QQAEAIKKHTDLKVGMYWGDMGIDYWDAATWKKEMNKHEVLVMTPQILLDGLRLSYFKLN 142
Query: 1394 GLRVLIFDECHHARKNH--PCI--RFIMHEKK 1311
++VLI DECHHAR H CI F H+ K
Sbjct: 143 MIKVLILDECHHARGKHQYACIMTEFYHHQLK 174
>ref|XP_004982513.1| PREDICTED: endoribonuclease Dicer homolog 2a-like isoform X1 [Setaria
italica]
Length = 1404
Score = 291 bits (746), Expect(2) = e-113
Identities = 164/433 (37%), Positives = 264/433 (60%), Gaps = 10/433 (2%)
Frame = -3
Query: 1291 PRIFGMTASPVYSKGKCFTECITEISSLEITLDAKVYTLKDITVLEAFISYPDVKIICYE 1112
PRIFGMTAS + SK ++ +IS LE ++AKVYT++ + L +I + K++ Y+
Sbjct: 186 PRIFGMTASLINSKTLQRSDYSVKISELENLMNAKVYTVESESALSQYIPFATTKVVQYD 245
Query: 1111 SNIIPYDVVKDLVAKLYYLQEKHMQFIENLEMDESSADSAERKIRKLYSLLHFCIEEMGI 932
+II ++ + L L+ KH++F++ ++ +SS ++AE++I++L + +CI+ +G+
Sbjct: 246 DSIISSELYCHAIGCLNRLERKHLEFLKG-KLHDSSLENAEKRIKQLSATFLYCIDNLGV 304
Query: 931 WAAAIACEFHRRTKPNK---FGLNIGEKNIIVTNAVKHFLQDSLSTCQQALPSEMTW--- 770
W AA A E + K + +G + EK V V+++++D+ S + + S+MT
Sbjct: 305 WLAAKAAEVLQSRKESCLSFWGEKLDEK---VEEFVRNYMEDAYSDLSEII-SKMTKRGI 360
Query: 769 --HSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKILQSMD 596
H +D ++ G L+ KV L+ +L +R + RCI+FVER +TS+V+ L ++
Sbjct: 361 QRHIGEDFAADLQDGLLTPKVHFLIKSLLEYRHKQDLRCIVFVERVVTSIVLESFLSTIH 420
Query: 595 CFTHLTIEYMVGNTATIQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVR 416
+ I YM G +Q +S+++ +I++ FR GKV++IVATQ+LEEGLD+ CN+++R
Sbjct: 421 QMSGWIIRYMAGKNCGLQHQSRKEHTEIVDSFRRGKVHLIVATQILEEGLDVPTCNLIIR 480
Query: 415 YDLPKTICSFIQSRGRARMKDSHYLLLVRDGE--QLAQVNRLLGGEKQMREAALQNDRVK 242
+D T+CSFIQSRGRARM++S Y+LLVR G+ L++ + L G + MRE +L+
Sbjct: 481 FDPSATVCSFIQSRGRARMQNSDYILLVRRGDAVALSKTQKFLAGGQIMREESLRLASTS 540
Query: 241 SVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQC 62
+ E Y V+ TGAVVT NSSV L+Y +CS+LP D Y+K P F IDK G C
Sbjct: 541 CQPLPNTMCQEESYCVQSTGAVVTLNSSVQLIYFFCSKLPSDEYFKPVPRFNIDKALGTC 600
Query: 61 LLKLPTNCPIPRV 23
L LP + PI +
Sbjct: 601 TLHLPKSSPIQTI 613
Score = 147 bits (370), Expect(2) = e-113
Identities = 73/143 (51%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
Frame = -2
Query: 1766 EATPRQYQLEIFERATQQNTIAYLDTGAGKTMIATMLLKAFVHQIRK-PQKNYAVFLVPX 1590
E R YQLE ERA NT+A+L+TGAGKT+IA +LL+A+ H+IR P +AVFLVP
Sbjct: 22 ETLARGYQLEALERAVAGNTVAFLETGAGKTLIAVLLLRAYAHRIRSAPPPCFAVFLVPT 81
Query: 1589 XXXXXXXXXXLKIHTDLKVGEYWGAMGVDLWDKKRWEQELQLYEVFVMTPQIFLDNLRHS 1410
++ HTDL+V +++G MGVD W+ W + + EV VMTPQI LDNLRH
Sbjct: 82 VVLVGQQARVIEHHTDLRVEQFYGEMGVDYWNADTWRRAVDGAEVLVMTPQILLDNLRHC 141
Query: 1409 FFNFDGLRVLIFDECHHARKNHP 1341
FF + +LIFDECHHA N P
Sbjct: 142 FFRLRDIALLIFDECHHAHGNSP 164