BLASTX nr result
ID: Ephedra27_contig00024709
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00024709
(892 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR18382.1| unknown [Picea sitchensis] 256 8e-66
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr... 204 3e-50
gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis] 203 6e-50
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis] 203 6e-50
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like... 203 6e-50
ref|XP_002894642.1| pseudouridine synthase family protein [Arabi... 202 1e-49
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana] 201 3e-49
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian... 201 3e-49
ref|NP_001067018.1| Os12g0560500 [Oryza sativa Japonica Group] g... 200 7e-49
gb|EEE53427.1| hypothetical protein OsJ_36505 [Oryza sativa Japo... 200 7e-49
ref|XP_006302538.1| hypothetical protein CARUB_v10020638mg [Caps... 199 9e-49
gb|EMJ06787.1| hypothetical protein PRUPE_ppa008866mg [Prunus pe... 199 9e-49
ref|XP_003579309.1| PREDICTED: RNA pseudourine synthase 1-like [... 199 1e-48
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like... 195 2e-47
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [... 195 2e-47
ref|XP_006664100.1| PREDICTED: RNA pseudouridine synthase 1-like... 194 5e-47
tpg|DAA55259.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea m... 194 5e-47
gb|ACN26382.1| unknown [Zea mays] 194 5e-47
ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [A... 193 6e-47
ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr... 192 1e-46
>gb|ABR18382.1| unknown [Picea sitchensis]
Length = 358
Score = 256 bits (654), Expect = 8e-66
Identities = 141/279 (50%), Positives = 175/279 (62%), Gaps = 13/279 (4%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
+PKPLS P PE SRQVE DRA RAEAA AG A+SR+ F+YED+ +AVNKP GVY
Sbjct: 26 FPKPLSQPPPELSRQVEYDRAMRAEAAVKAGPALSRNEFIYEDEWMIAVNKPSGVYCEHV 85
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX-------RLDRDTSGVMIITKQHKIAAKFVKAYTERR 426
RLDRDTSGVM+ITK HKIA + VKA+T+R+
Sbjct: 86 LSSIPELLASSPSSAGAANDVNPLELHLANRLDRDTSGVMVITKLHKIAGQLVKAFTDRK 145
Query: 427 ICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNV 606
+ KTYLALCI P+P WN+IYIESGHGRSK+GAWR YS+ DVG++LPGG+ VR+M+T L V
Sbjct: 146 VRKTYLALCIGPAPKWNNIYIESGHGRSKFGAWRVYSRTDVGRILPGGTVVREMATHLKV 205
Query: 607 LSINGFPKTTTDAIHDSDTFLQSINLTATTLKNP------DKITLDGMNQVVATEQLETG 768
L++N + D++ + Q I A LK D + D + +VV TEQ
Sbjct: 206 LAVNANHRMHRDSVDKAQNSSQGI---AFDLKEDRFATVGDNGSTDSIEKVVVTEQNSKA 262
Query: 769 LGLQPSDMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
G +S P+ KND VL+RA PL+GRTHQIRLHCQY
Sbjct: 263 PGQDRDIVSSPNIRKNDEVLIRASPLSGRTHQIRLHCQY 301
>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
gi|567881937|ref|XP_006433527.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
gi|557535648|gb|ESR46766.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
gi|557535649|gb|ESR46767.1| hypothetical protein
CICLE_v10001637mg [Citrus clementina]
Length = 357
Score = 204 bits (520), Expect = 3e-50
Identities = 117/278 (42%), Positives = 151/278 (54%), Gaps = 12/278 (4%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP PLSPP P S+ +EL RA A + S+ + +SR LYED+ FVAVNKP GVY
Sbjct: 52 YPTPLSPPLPAISKDIELTRAMSASSKSSL-YKLSRSDVLYEDEWFVAVNKPQGVYCESV 110
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX------------RLDRDTSGVMIITKQHKIAAKFVKA 411
RLDRDTSGVM+ITK HK+A+K VKA
Sbjct: 111 LASVPCFLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKA 170
Query: 412 YTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMS 591
+T+ ++ KTY+ALCI P+P W I I SGHGRSK+GAWR Y+ +DVG+VLPGGS VRDM
Sbjct: 171 FTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMV 230
Query: 592 TLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGL 771
T VLS+NG + K P ++ N +V ++
Sbjct: 231 TSFEVLSVNG----------------------EGSFKEPSELQEHEENNIVVEKK----- 263
Query: 772 GLQPSDMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ +D K + +L+RA+P +GRTHQIRLHCQY
Sbjct: 264 ------AVLDADAKKNEILVRAFPRSGRTHQIRLHCQY 295
>gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]
Length = 319
Score = 203 bits (517), Expect = 6e-50
Identities = 115/273 (42%), Positives = 152/273 (55%), Gaps = 7/273 (2%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP PLSPP P S+ VEL RA A + S+ +ISR+ F++ED+C VAVNKP G+Y
Sbjct: 22 YPVPLSPPPPPVSKDVELSRAMSASSKSSL-FSISRNDFVFEDECLVAVNKPQGIYCESV 80
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX-------RLDRDTSGVMIITKQHKIAAKFVKAYTERR 426
RLDRDTSG+M+ITK HK+A+K VKA+T +
Sbjct: 81 FDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASKLVKAFTTHK 140
Query: 427 ICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNV 606
+ KTY+A C+ +P W +I I+SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDM T V
Sbjct: 141 VSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEV 200
Query: 607 LSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPS 786
LS+NG Q ++ K P + DG N ++ E+
Sbjct: 201 LSVNG----------------QRVS------KEPSEFRKDGNNVLIVEEK---------- 228
Query: 787 DMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ D K D +L+RA P +GR+HQIRLHCQY
Sbjct: 229 -ALIDRDGKKDEILVRARPKSGRSHQIRLHCQY 260
>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
Length = 319
Score = 203 bits (517), Expect = 6e-50
Identities = 115/273 (42%), Positives = 152/273 (55%), Gaps = 7/273 (2%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP PLSPP P S+ VEL RA A + S+ +ISR+ F++ED+C VAVNKP G+Y
Sbjct: 22 YPVPLSPPPPPVSKDVELSRAMSASSKSSL-FSISRNDFVFEDECLVAVNKPQGIYCESV 80
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX-------RLDRDTSGVMIITKQHKIAAKFVKAYTERR 426
RLDRDTSG+M+ITK HK+A+K VKA+T +
Sbjct: 81 FDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASKLVKAFTTHK 140
Query: 427 ICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNV 606
+ KTY+A C+ +P W +I I+SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDM T V
Sbjct: 141 VSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEV 200
Query: 607 LSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPS 786
LS+NG Q ++ K P + DG N ++ E+
Sbjct: 201 LSVNG----------------QRVS------KEPSEFRKDGNNVLIVEEK---------- 228
Query: 787 DMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ D K D +L+RA P +GR+HQIRLHCQY
Sbjct: 229 -ALIDRDGKKDEILVRARPKSGRSHQIRLHCQY 260
>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
Length = 324
Score = 203 bits (517), Expect = 6e-50
Identities = 116/278 (41%), Positives = 150/278 (53%), Gaps = 12/278 (4%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP PLSPP P S+ +EL RA A + S+ + +SR LYED+ VAVNKP GVY
Sbjct: 19 YPTPLSPPLPAISKDIELTRAMSASSKSSL-YKLSRSDVLYEDEWLVAVNKPQGVYCESV 77
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX------------RLDRDTSGVMIITKQHKIAAKFVKA 411
RLDRDTSGVM+ITK HK+A+K VKA
Sbjct: 78 LASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKA 137
Query: 412 YTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMS 591
+T+ ++ KTY+ALCI P+P W I I SGHGRSK+GAWR Y+ +DVG+VLPGGS VRDM
Sbjct: 138 FTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMV 197
Query: 592 TLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGL 771
T VLS+NG + K P ++ D N +V ++
Sbjct: 198 TSFEVLSVNG----------------------EGSFKEPSELQEDEENNIVVEKK----- 230
Query: 772 GLQPSDMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ +D K + +L+R +P +GRTHQIRLHCQY
Sbjct: 231 ------AVLDADAKKNEILVRVFPRSGRTHQIRLHCQY 262
>ref|XP_002894642.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297340484|gb|EFH70901.1| pseudouridine
synthase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 321
Score = 202 bits (515), Expect = 1e-49
Identities = 120/280 (42%), Positives = 155/280 (55%), Gaps = 1/280 (0%)
Frame = +1
Query: 49 NTKKMEEEKG-KVVYPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCF 225
+TK ME + YPKP+SPP P S+ +EL RA A + S+ + ++RDH LYED+
Sbjct: 26 STKAMEATSELNLHYPKPISPPPPPISKDIELRRAMEASSKSSLFN-LTRDHVLYEDEYL 84
Query: 226 VAVNKPCGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFV 405
+AVNKP GVY RLDRDTSGVMIITK HK+AAK V
Sbjct: 85 MAVNKPKGVYCEAVLRSAPQIVLDSSSEFHLAN----RLDRDTSGVMIITKSHKVAAKLV 140
Query: 406 KAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRD 585
KA+TE +I K+Y+ALCI SP W I + SGHGRSK+GAWR Y+ DVG+VLPGGS VRD
Sbjct: 141 KAFTEHKIRKSYIALCIGSSPNWRKITVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRD 200
Query: 586 MSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLET 765
M T V+S+NG + + + V+ E
Sbjct: 201 METTFEVVSVNGVETESCE-----------------------------VENVIVVE---- 227
Query: 766 GLGLQPSDMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ ++S D D+V++RA+P +GRTHQIRLHCQY
Sbjct: 228 ----REQELSCAGD---DVVVVRAFPRSGRTHQIRLHCQY 260
>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
Length = 293
Score = 201 bits (511), Expect = 3e-49
Identities = 115/266 (43%), Positives = 152/266 (57%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YPKP+S P P S+ +EL RA A + S+ + ++RD LYED+ +AVNKP GVY
Sbjct: 11 YPKPISAPPPPISKDIELRRAMEASSKSSLFN-LTRDDILYEDEYLMAVNKPKGVYCEAV 69
Query: 268 XXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYLA 447
RLDRDTSGVMIITK HK+AAK VKA+TE +I K+Y+A
Sbjct: 70 LRSAPQIVLDSSSEYHLAN----RLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIA 125
Query: 448 LCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGFP 627
LCI SP W + + SGHGRSK+GAWR Y+ DVG+VLPGGS VRDM T V+S+N
Sbjct: 126 LCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVN--- 182
Query: 628 KTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMPSD 807
++KN + L+ +N V+ E ++S D
Sbjct: 183 ----------------------SVKN-ESCELEDVNHVIVAE--------GERELSCGGD 211
Query: 808 EKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ + +V++RA+P +GRTHQIRLHCQY
Sbjct: 212 DDDVVVVVRAFPRSGRTHQIRLHCQY 237
>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
pseudouridine synthase 1; AltName: Full=RNA
pseudouridylate synthase 1; AltName: Full=RNA-uridine
isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
[Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
[Arabidopsis thaliana]
Length = 322
Score = 201 bits (511), Expect = 3e-49
Identities = 115/266 (43%), Positives = 152/266 (57%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YPKP+S P P S+ +EL RA A + S+ + ++RD LYED+ +AVNKP GVY
Sbjct: 40 YPKPISAPPPPISKDIELRRAMEASSKSSLFN-LTRDDILYEDEYLMAVNKPKGVYCEAV 98
Query: 268 XXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYLA 447
RLDRDTSGVMIITK HK+AAK VKA+TE +I K+Y+A
Sbjct: 99 LRSAPQIVLDSSSEYHLAN----RLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIA 154
Query: 448 LCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGFP 627
LCI SP W + + SGHGRSK+GAWR Y+ DVG+VLPGGS VRDM T V+S+N
Sbjct: 155 LCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVN--- 211
Query: 628 KTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMPSD 807
++KN + L+ +N V+ E ++S D
Sbjct: 212 ----------------------SVKN-ESCELEDVNHVIVAE--------GERELSCGGD 240
Query: 808 EKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ + +V++RA+P +GRTHQIRLHCQY
Sbjct: 241 DDDVVVVVRAFPRSGRTHQIRLHCQY 266
>ref|NP_001067018.1| Os12g0560500 [Oryza sativa Japonica Group]
gi|122203511|sp|Q2QNM3.1|PUS1_ORYSJ RecName: Full=RNA
pseudouridine synthase 1; AltName: Full=RNA
pseudouridylate synthase 1; AltName: Full=RNA-uridine
isomerase 1 gi|77556134|gb|ABA98930.1| RNA
pseudouridylate synthase, putative, expressed [Oryza
sativa Japonica Group] gi|113649525|dbj|BAF30037.1|
Os12g0560500 [Oryza sativa Japonica Group]
gi|125537021|gb|EAY83509.1| hypothetical protein
OsI_38723 [Oryza sativa Indica Group]
gi|215692563|dbj|BAG87983.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 345
Score = 200 bits (508), Expect = 7e-49
Identities = 116/267 (43%), Positives = 143/267 (53%), Gaps = 1/267 (0%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP P+SPPYP S+ VEL RA A A S A S ++ED+ V+KP GVY
Sbjct: 51 YPVPVSPPYPAASKDVELRRAMTASARSAA---YSSAPVVFEDEWLAVVDKPAGVYCDAL 107
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX-RLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYL 444
RLDRDTSG+M+ITK +K+A K VKA+TE ++ KTYL
Sbjct: 108 LSALPCSAATLGDEATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHKVKKTYL 167
Query: 445 ALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGF 624
ALCI P W I I SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDMST VL ING
Sbjct: 168 ALCIGYPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGING- 226
Query: 625 PKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMPS 804
+ P +D + E + +D++
Sbjct: 227 ---------------------KGQFREPSNFEVDETESITVQE--------KAADLTSDG 257
Query: 805 DEKNDIVLLRAYPLTGRTHQIRLHCQY 885
DEKN I+L+RAYP +GRTHQIRLHCQY
Sbjct: 258 DEKNSIILVRAYPQSGRTHQIRLHCQY 284
>gb|EEE53427.1| hypothetical protein OsJ_36505 [Oryza sativa Japonica Group]
Length = 423
Score = 200 bits (508), Expect = 7e-49
Identities = 116/267 (43%), Positives = 143/267 (53%), Gaps = 1/267 (0%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP P+SPPYP S+ VEL RA A A S A S ++ED+ V+KP GVY
Sbjct: 129 YPVPVSPPYPAASKDVELRRAMTASARSAA---YSSAPVVFEDEWLAVVDKPAGVYCDAL 185
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX-RLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYL 444
RLDRDTSG+M+ITK +K+A K VKA+TE ++ KTYL
Sbjct: 186 LSALPCSAATLGDEATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHKVKKTYL 245
Query: 445 ALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGF 624
ALCI P W I I SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDMST VL ING
Sbjct: 246 ALCIGYPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGING- 304
Query: 625 PKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMPS 804
+ P +D + E + +D++
Sbjct: 305 ---------------------KGQFREPSNFEVDETESITVQE--------KAADLTSDG 335
Query: 805 DEKNDIVLLRAYPLTGRTHQIRLHCQY 885
DEKN I+L+RAYP +GRTHQIRLHCQY
Sbjct: 336 DEKNSIILVRAYPQSGRTHQIRLHCQY 362
>ref|XP_006302538.1| hypothetical protein CARUB_v10020638mg [Capsella rubella]
gi|565489799|ref|XP_006302539.1| hypothetical protein
CARUB_v10020638mg [Capsella rubella]
gi|482571248|gb|EOA35436.1| hypothetical protein
CARUB_v10020638mg [Capsella rubella]
gi|482571249|gb|EOA35437.1| hypothetical protein
CARUB_v10020638mg [Capsella rubella]
Length = 329
Score = 199 bits (507), Expect = 9e-49
Identities = 114/268 (42%), Positives = 152/268 (56%), Gaps = 2/268 (0%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YPKP+S P P S+ +EL RA A + S+ + ++RD LYED+ +AVNKP GVY
Sbjct: 41 YPKPISSPPPPISKDIELKRAMEASSKSSL-YNLTRDDVLYEDEHLMAVNKPKGVYCEAV 99
Query: 268 XXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYLA 447
RLDRDTSGVMIITK HK+AAK VKA+TE +I K+Y+A
Sbjct: 100 LRSAPQIVLDSSSEFHLAN----RLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIA 155
Query: 448 LCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGFP 627
LCI SP W+ + + SGHGRSK+GAWR YS DVG+VLPGGS VRDM T V+S+NG
Sbjct: 156 LCIGSSPNWSKVTVSSGHGRSKHGAWRVYSALDVGRVLPGGSFVRDMETTFEVVSVNGVK 215
Query: 628 KTT--TDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMP 801
+ D + ++S+ + ++G +V + E +
Sbjct: 216 SESCEVDGVKTESCEVESV------------VVVEGKREVSSCEGDDV------------ 251
Query: 802 SDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
+V++RA+P +GRTHQIRLHCQY
Sbjct: 252 ------VVVVRAFPRSGRTHQIRLHCQY 273
>gb|EMJ06787.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
Length = 316
Score = 199 bits (507), Expect = 9e-49
Identities = 114/270 (42%), Positives = 146/270 (54%), Gaps = 4/270 (1%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP PLSPP P S+ +EL RA A + S+ ++SRD ++ED + VNKP GVY
Sbjct: 22 YPVPLSPPLPPISKHIELARAMSASSKSSL-FSLSRDDVVFEDQWLIVVNKPQGVYCESV 80
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX----RLDRDTSGVMIITKQHKIAAKFVKAYTERRICK 435
RLDRDTSG+M+ITK HK+A+K VKA+T+ +I K
Sbjct: 81 LESVPQLLCDSAESGTPANQLELHLANRLDRDTSGLMVITKSHKVASKLVKAFTDHKISK 140
Query: 436 TYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSI 615
TY+A CI +P W I ++SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDM T VLSI
Sbjct: 141 TYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEVLSI 200
Query: 616 NGFPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMS 795
NG +LK P + D N +V E+
Sbjct: 201 NG----------------------QGSLKEPSEFKKDEANTIVVQEK-----------AV 227
Query: 796 MPSDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ D K D +L+RA P +GRTHQIRLHCQY
Sbjct: 228 IDKDTKKDEILVRARPRSGRTHQIRLHCQY 257
>ref|XP_003579309.1| PREDICTED: RNA pseudourine synthase 1-like [Brachypodium
distachyon]
Length = 308
Score = 199 bits (506), Expect = 1e-48
Identities = 116/268 (43%), Positives = 147/268 (54%), Gaps = 2/268 (0%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP P+SPPYP S+ VEL RA A A S A + + ++ED+ V+KP GVY
Sbjct: 13 YPCPVSPPYPAVSKDVELRRAMTASARSGAYASAA---VVFEDEWLSVVDKPAGVYCDAL 69
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX--RLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTY 441
RLDRDTSG+M+ITK +K+AAK VKA+TE ++ KTY
Sbjct: 70 LSALPCYAAAAAGDPATKPNLHLANRLDRDTSGLMVITKCNKVAAKLVKAFTEHKVKKTY 129
Query: 442 LALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSING 621
LALCI PTW I I SGHGRSK+GAWR Y+ +DVG+ LPGGS+VRDMST VL ING
Sbjct: 130 LALCIGYPPTWEKIRICSGHGRSKHGAWRVYAMSDVGRTLPGGSSVRDMSTKFEVLGING 189
Query: 622 FPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMP 801
+ P + +D + + E + +D S
Sbjct: 190 ----------------------KGQFREPSNVNIDDIESITVQE--------KAADHSST 219
Query: 802 SDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
D KN ++L+RAYP +GRTHQIRLHCQY
Sbjct: 220 DDLKNHMILVRAYPQSGRTHQIRLHCQY 247
>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
Length = 332
Score = 195 bits (495), Expect = 2e-47
Identities = 114/268 (42%), Positives = 146/268 (54%), Gaps = 2/268 (0%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP PLSPP P S+ +E +RA A + S A ++SR H ++ED+ +AVNKP G+Y
Sbjct: 47 YPVPLSPPLPALSKDIEPNRALTASSKS-ALFSLSRSHVIFEDEWIIAVNKPQGIYCESV 105
Query: 268 XXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYLA 447
RLDRDTSGVM+ITK HK+AAKFVKA+T+ ++ KTYLA
Sbjct: 106 LSSLPDLLNDTGANVSELHLAN-RLDRDTSGVMLITKLHKVAAKFVKAFTDHKVRKTYLA 164
Query: 448 LCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGFP 627
C+ +P W I ++SGHGRSKYGAWR Y+ +D G+ LPGGS V+DM T VLS+NG
Sbjct: 165 YCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAGRKLPGGSLVKDMETSFEVLSVNGLG 224
Query: 628 --KTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMP 801
K +D D D V+ E+ G
Sbjct: 225 CFKEVSDFHKDEDV-------------------------VIVQEKSVIG----------- 248
Query: 802 SDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
D K D +L+RA P +GRTHQIRLHCQY
Sbjct: 249 CDLKKDEILVRASPRSGRTHQIRLHCQY 276
>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
Length = 308
Score = 195 bits (495), Expect = 2e-47
Identities = 114/268 (42%), Positives = 146/268 (54%), Gaps = 2/268 (0%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP PLSPP P S+ +E +RA A + S A ++SR H ++ED+ +AVNKP G+Y
Sbjct: 17 YPVPLSPPLPTLSKDIEPNRALTASSKS-ALFSLSRSHVIFEDEWIIAVNKPQGIYCESV 75
Query: 268 XXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYLA 447
RLDRDTSGVM+ITK HK+AAKFVKA+T+ ++ KTYLA
Sbjct: 76 LSSLPDLLNDTGANVSELHLAN-RLDRDTSGVMLITKLHKVAAKFVKAFTDHKVRKTYLA 134
Query: 448 LCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGFP 627
C+ +P W I ++SGHGRSKYGAWR Y+ +D G+ LPGGS V+DM T VLS+NG
Sbjct: 135 YCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAGRKLPGGSLVKDMETSFEVLSVNGLG 194
Query: 628 --KTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMP 801
K +D D D V+ E+ G
Sbjct: 195 CFKEVSDLHKDEDI-------------------------VIVQEKSVIG----------- 218
Query: 802 SDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
D K D +L+RA P +GRTHQIRLHCQY
Sbjct: 219 CDLKKDEILVRASPRSGRTHQIRLHCQY 246
>ref|XP_006664100.1| PREDICTED: RNA pseudouridine synthase 1-like [Oryza brachyantha]
Length = 346
Score = 194 bits (492), Expect = 5e-47
Identities = 116/271 (42%), Positives = 145/271 (53%), Gaps = 5/271 (1%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP P+SPPYP S+ VEL RA A A S A S ++ED+ V+KP GVY
Sbjct: 48 YPVPVSPPYPAVSKDVELRRAMTASARSAA---YSSATVVFEDEWLAVVDKPAGVYCDAL 104
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX----RLDRDTSGVMIITKQHKIAAKFVKAYTERRICK 435
RLDRDTSG+M+ITK +K+A K VKA+TE + K
Sbjct: 105 LSVLPCPGSSAAASGDTSTKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHEVKK 164
Query: 436 TYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSI 615
TYLALCI PTW I I SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDMST VL I
Sbjct: 165 TYLALCIGCPPTWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTQFEVLGI 224
Query: 616 NGFPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMS 795
NG + P + +D + + E + +D++
Sbjct: 225 NG----------------------NCQFREPSNLEVDEIESITVQE--------KAADLN 254
Query: 796 MPSDEKN-DIVLLRAYPLTGRTHQIRLHCQY 885
SD KN ++L+RAYP +GRTHQIRLHCQY
Sbjct: 255 SNSDVKNSSMILVRAYPRSGRTHQIRLHCQY 285
>tpg|DAA55259.1| TPA: hypothetical protein ZEAMMB73_192305 [Zea mays]
Length = 340
Score = 194 bits (492), Expect = 5e-47
Identities = 108/266 (40%), Positives = 141/266 (53%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP P+SPPYP S+ +EL RA A A S A + ++ED+ V+KP GVY
Sbjct: 47 YPSPVSPPYPATSKDLELRRAMTASARSAA---FASADVVFEDEWLAVVDKPAGVYCDAL 103
Query: 268 XXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYLA 447
RLDRDTSG+M+ITK +K+A K VKA+T+ ++ KTYLA
Sbjct: 104 LTSFPCSAVSENPATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYLA 163
Query: 448 LCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGFP 627
LCI P W I I SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDMST VL +NG
Sbjct: 164 LCIGFPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGVNG-- 221
Query: 628 KTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMPSD 807
+ P + D + + E + +D + D
Sbjct: 222 --------------------KGQFREPYSLDTDDIEPITVQE--------KATDQTCGGD 253
Query: 808 EKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ ++L+RAYP +GRTHQIRLHCQY
Sbjct: 254 ANSSVILVRAYPQSGRTHQIRLHCQY 279
>gb|ACN26382.1| unknown [Zea mays]
Length = 307
Score = 194 bits (492), Expect = 5e-47
Identities = 108/266 (40%), Positives = 141/266 (53%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
YP P+SPPYP S+ +EL RA A A S A + ++ED+ V+KP GVY
Sbjct: 14 YPSPVSPPYPATSKDLELRRAMTASARSAA---FASADVVFEDEWLAVVDKPAGVYCDAL 70
Query: 268 XXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQHKIAAKFVKAYTERRICKTYLA 447
RLDRDTSG+M+ITK +K+A K VKA+T+ ++ KTYLA
Sbjct: 71 LTSFPCSAVSENPATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYLA 130
Query: 448 LCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSINGFP 627
LCI P W I I SGHGRSK+GAWR Y+ +DVG+ LPGGS VRDMST VL +NG
Sbjct: 131 LCIGFPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGVNG-- 188
Query: 628 KTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMSMPSD 807
+ P + D + + E + +D + D
Sbjct: 189 --------------------KGQFREPYSLDTDDIEPITVQE--------KATDQTCGGD 220
Query: 808 EKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ ++L+RAYP +GRTHQIRLHCQY
Sbjct: 221 ANSSVILVRAYPQSGRTHQIRLHCQY 246
>ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [Amborella trichopoda]
gi|548859042|gb|ERN16743.1| hypothetical protein
AMTR_s00057p00025150 [Amborella trichopoda]
Length = 326
Score = 193 bits (491), Expect = 6e-47
Identities = 113/270 (41%), Positives = 147/270 (54%), Gaps = 4/270 (1%)
Frame = +1
Query: 88 YPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDHFLYEDDCFVAVNKPCGVYXXXX 267
+P PL+ P S+QVELDRA A A S G +I++ +YED +A+NKP GVY
Sbjct: 30 FPIPLTRHPPPISKQVELDRAMAASAKS--GFSITKSDVIYEDQWLIAINKPSGVYCDHV 87
Query: 268 XXXXXXXXXXXXXXXXXXXXXXX----RLDRDTSGVMIITKQHKIAAKFVKAYTERRICK 435
RLDRDTSGVM+ITK HK+A K V+A+TE R+ K
Sbjct: 88 LASIPRLLGVSPESSGAENPLELHLGNRLDRDTSGVMLITKLHKVAGKLVQAFTEHRVKK 147
Query: 436 TYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVLPGGSTVRDMSTLLNVLSI 615
TY+ALCI +P W I ++SGHGRSK+GAWR YS +D+G+ LPGGS VR+M T VLS+
Sbjct: 148 TYIALCIGLAPQWEEIALKSGHGRSKFGAWRVYSASDIGRTLPGGSVVREMVTSFKVLSV 207
Query: 616 NGFPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQVVATEQLETGLGLQPSDMS 795
NG L S N+ +N I D +++ +T
Sbjct: 208 NG---------------LSSENIDFIEKRNEMLIVRDEGSKISSTH-------------- 238
Query: 796 MPSDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
+ D +L+RAYP +GRTHQIRLHCQY
Sbjct: 239 ----DAKDEILIRAYPQSGRTHQIRLHCQY 264
>ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
gi|557088941|gb|ESQ29721.1| hypothetical protein
EUTSA_v10023586mg [Eutrema salsugineum]
Length = 333
Score = 192 bits (489), Expect = 1e-46
Identities = 120/288 (41%), Positives = 161/288 (55%)
Frame = +1
Query: 22 VSLEDVESRNTKKMEEEKGKVVYPKPLSPPYPEHSRQVELDRAKRAEAASTAGHAISRDH 201
VS++ +E+RN + + YPKP+S P P S+ +EL RA A + S+ + ++R+
Sbjct: 28 VSIKAMEARNDLPTTVDTNQN-YPKPISAPPPPISKDIELKRAMEASSKSSLFN-LTRND 85
Query: 202 FLYEDDCFVAVNKPCGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDRDTSGVMIITKQ 381
LYED+ +AVNKP G+Y RLDRDTSGVM+ITK
Sbjct: 86 VLYEDEWLMAVNKPKGIYCESVLSSAPKVIVDSSSTANEFHLAN-RLDRDTSGVMLITKS 144
Query: 382 HKIAAKFVKAYTERRICKTYLALCICPSPTWNHIYIESGHGRSKYGAWRTYSKNDVGKVL 561
HK+AAK VKA+TE +I K+Y+ALCI SP W+ I + SGHGRSK+GAWR Y+ DVG+VL
Sbjct: 145 HKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKITVRSGHGRSKHGAWRVYAALDVGRVL 204
Query: 562 PGGSTVRDMSTLLNVLSINGFPKTTTDAIHDSDTFLQSINLTATTLKNPDKITLDGMNQV 741
PGGS VRDM T V+S+NG KT L+ I ++G
Sbjct: 205 PGGSFVRDMETTFEVVSVNG-EKT-------------------EPLEVESVIVVEG---- 240
Query: 742 VATEQLETGLGLQPSDMSMPSDEKNDIVLLRAYPLTGRTHQIRLHCQY 885
E GL S +D+V++RA+P +GRTHQIRLHC+Y
Sbjct: 241 ------EPGL----------SCVGDDVVVVRAFPRSGRTHQIRLHCRY 272