BLASTX nr result
ID: Ephedra27_contig00024659
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00024659
(441 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY87195.1| reverse transcriptase [Ginkgo biloba] 129 3e-28
gb|AAY87192.1| reverse transcriptase [Cycas revoluta] 121 8e-26
gb|ABA99612.1| retrotransposon protein, putative, unclassified [... 120 2e-25
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 120 2e-25
gb|AAY87200.1| reverse transcriptase [Sciadopitys verticillata] 120 2e-25
gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 119 5e-25
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group] 115 6e-24
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group] 115 6e-24
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 114 1e-23
gb|ABF97935.1| retrotransposon protein, putative, unclassified [... 114 1e-23
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 114 1e-23
gb|AAP68410.1| putative gag/pol polyprotein [Oryza sativa Japoni... 114 1e-23
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza... 113 2e-23
emb|CAE04657.2| OSJNBa0061G20.13 [Oryza sativa Japonica Group] 113 2e-23
emb|CAH66692.1| OSIGBa0097A15.7 [Oryza sativa Indica Group] 113 2e-23
gb|AAY87201.1| reverse transcriptase [Nymphaea tetragona] 113 3e-23
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 113 3e-23
emb|CAA78285.1| unnamed protein product [Beta vulgaris subsp. vu... 113 3e-23
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 113 3e-23
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 113 3e-23
>gb|AAY87195.1| reverse transcriptase [Ginkgo biloba]
Length = 143
Score = 129 bits (325), Expect = 3e-28
Identities = 63/125 (50%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QKEGIDY++TFAP+AKM TI +++LA + WELH +DVKSAFLNG +TEE+YM++P +
Sbjct: 11 QKEGIDYQETFAPVAKMITIRVVLALAAQFRWELHQMDVKSAFLNGDLTEEVYMEQPPGF 70
Query: 181 --KDQNNLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
K + L C + K+LYGLKQAPRAWYKK++++ G+ KS SD + N + L+
Sbjct: 71 QVKGKETLVCRLKKALYGLKQAPRAWYKKIDDYFMKNGYNKSSSDSNLYIKVRNGQITLV 130
Query: 355 AFHVN 369
+V+
Sbjct: 131 TLYVD 135
>gb|AAY87192.1| reverse transcriptase [Cycas revoluta]
Length = 148
Score = 121 bits (304), Expect = 8e-26
Identities = 55/105 (52%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q GIDY++TF+P+AK+ T+ ++I+LA +KGWE++ +DVKSAFLNG + EE+YM +P+ Y
Sbjct: 16 QTTGIDYEETFSPVAKLNTVKTVIALAAQKGWEIYQMDVKSAFLNGDLQEEVYMYQPEGY 75
Query: 181 --KDQNNLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISD 309
N+ C + K+LYGLKQAPRAWY KL+ +L+ GF + SD
Sbjct: 76 IKAGHENMVCKLKKALYGLKQAPRAWYAKLDSYLTENGFHRCESD 120
>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1198
Score = 120 bits (301), Expect = 2e-25
Identities = 55/125 (44%), Positives = 94/125 (75%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QK GIDY +T+AP+A+++TI +II+LA +K W+++ +DVKSAFLNG + EEIY+++P+ +
Sbjct: 780 QKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGF 839
Query: 181 KDQNNLSCI--ILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
Q + + + K+LYGLKQAPRAWY +++++ +GF KSIS+P +++ T +++
Sbjct: 840 SVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIV 899
Query: 355 AFHVN 369
+ +V+
Sbjct: 900 SLYVD 904
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 120 bits (301), Expect = 2e-25
Identities = 55/125 (44%), Positives = 94/125 (75%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QK GIDY +T+AP+A+++TI +II+LA +K W+++ +DVKSAFLNG + EEIY+++P+ +
Sbjct: 917 QKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGF 976
Query: 181 KDQNNLSCI--ILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
Q + + + K+LYGLKQAPRAWY +++++ +GF KSIS+P +++ T +++
Sbjct: 977 SVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIV 1036
Query: 355 AFHVN 369
+ +V+
Sbjct: 1037 SLYVD 1041
>gb|AAY87200.1| reverse transcriptase [Sciadopitys verticillata]
Length = 148
Score = 120 bits (300), Expect = 2e-25
Identities = 57/125 (45%), Positives = 87/125 (69%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q+EG+D+++TFAP AKM T ++S+A + GW++ +DVKSAFLNG + EE+YM +P+ +
Sbjct: 16 QQEGVDFEETFAPTAKMVTFRLLLSMAAQFGWKVFQMDVKSAFLNGDLDEEVYMTQPEGF 75
Query: 181 KD--QNNLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
++ +L C ++KSLYGLKQAPRAWY K++ L GF +S+SDP + V+L
Sbjct: 76 QETGSEHLVCRLVKSLYGLKQAPRAWYIKIDAHLKDSGFRRSMSDPNLYVKSTEDSIVIL 135
Query: 355 AFHVN 369
+V+
Sbjct: 136 VVYVD 140
>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1142
Score = 119 bits (297), Expect = 5e-25
Identities = 54/125 (43%), Positives = 93/125 (74%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QK GIDY +T+AP+A+++TI +II+LA +K W+++ +DVKSAFLNG + EEIY+++P+ +
Sbjct: 707 QKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGF 766
Query: 181 KDQNNLSCI--ILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
Q + + + K+LYGLKQAPR WY +++++ +GF KSIS+P +++ T +++
Sbjct: 767 SVQGGENKVFRLKKALYGLKQAPRVWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIV 826
Query: 355 AFHVN 369
+ +V+
Sbjct: 827 SLYVD 831
>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1136
Score = 115 bits (288), Expect = 6e-24
Identities = 54/125 (43%), Positives = 92/125 (73%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QK GIDY +T+A +A+++TI +II+LA +K W+++ +DVKSAFLNG + EEIY+++P+ +
Sbjct: 701 QKPGIDYYETYAHVARLETIHTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPERF 760
Query: 181 KDQNNLSCI--ILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
Q + + + K+LYGLKQAPRAWY +++++ +GF KSIS+P + + T +++
Sbjct: 761 SVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPILYVKKTGTDILIV 820
Query: 355 AFHVN 369
+ +V+
Sbjct: 821 SLYVD 825
>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
Length = 1425
Score = 115 bits (288), Expect = 6e-24
Identities = 51/125 (40%), Positives = 88/125 (70%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q++G+D+ + FAP+A+M+T+ +++LA +KGWE+HH+DVKSAFLNG + EE+Y+ +P +
Sbjct: 985 QQQGVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGF 1044
Query: 181 KDQNNLSCI--ILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
D+ N S + + K+LYGL+QAPRAW KL+ L + F KS ++ + + ++++
Sbjct: 1045 DDKTNASKVLKLRKALYGLRQAPRAWNAKLDNTLLSLKFNKSATESAVYVRGVGDSKLIV 1104
Query: 355 AFHVN 369
+V+
Sbjct: 1105 GVYVD 1109
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 114 bits (285), Expect = 1e-23
Identities = 57/125 (45%), Positives = 79/125 (63%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q+ GIDY+DTF+P+ K TI ++SLA +GW L +DVK+AFL+G + EE+YMK+P Y
Sbjct: 902 QRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGY 961
Query: 181 --KDQNNLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
K N C + K+LYGLKQAPRAWY +L LS GF S +D ++ + L
Sbjct: 962 EKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFL 1021
Query: 355 AFHVN 369
+V+
Sbjct: 1022 LIYVD 1026
>gb|ABF97935.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 670
Score = 114 bits (285), Expect = 1e-23
Identities = 48/105 (45%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q+ G+DY + FAP+A+M+T+ ++++A ++GWE+HH+DVKSAFLNG + E++Y+ +P +
Sbjct: 359 QQHGVDYDEVFAPVARMETVRLLVAMAAQEGWEIHHMDVKSAFLNGDLEEDVYVVQPPGF 418
Query: 181 KDQNNLSCIIL--KSLYGLKQAPRAWYKKLEEFLSTQGFTKSISD 309
D+ + +++ K+LYGLKQAPRAW KL+E L + GF +S+++
Sbjct: 419 VDEEHPDKVLILQKTLYGLKQAPRAWNAKLDESLVSLGFRRSVTE 463
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 114 bits (285), Expect = 1e-23
Identities = 57/125 (45%), Positives = 79/125 (63%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q+ GIDY+DTF+P+ K TI ++SLA +GW L +DVK+AFL+G + EE+YMK+P Y
Sbjct: 956 QRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGY 1015
Query: 181 --KDQNNLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
K N C + K+LYGLKQAPRAWY +L LS GF S +D ++ + L
Sbjct: 1016 EKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFL 1075
Query: 355 AFHVN 369
+V+
Sbjct: 1076 LIYVD 1080
>gb|AAP68410.1| putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 653
Score = 114 bits (285), Expect = 1e-23
Identities = 48/105 (45%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q+ G+DY + FAP+A+M+T+ ++++A ++GWE+HH+DVKSAFLNG + E++Y+ +P +
Sbjct: 342 QQHGVDYDEVFAPVARMETVRLLVAMAAQEGWEIHHMDVKSAFLNGDLEEDVYVVQPPGF 401
Query: 181 KDQNNLSCIIL--KSLYGLKQAPRAWYKKLEEFLSTQGFTKSISD 309
D+ + +++ K+LYGLKQAPRAW KL+E L + GF +S+++
Sbjct: 402 VDEEHPDKVLILQKTLYGLKQAPRAWNAKLDESLVSLGFRRSVTE 446
>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
gi|31429795|gb|AAP51797.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1350
Score = 113 bits (283), Expect = 2e-23
Identities = 52/104 (50%), Positives = 81/104 (77%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QK GIDY +T+AP+A+++TI +II+LA +K W+++ +DVKSAFLNG + EEIY+++P+ +
Sbjct: 840 QKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGF 899
Query: 181 KDQNNLSCI--ILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSIS 306
Q + + + K+LYGLKQAPRAWY +++++ +GF KSIS
Sbjct: 900 SVQGGENKVFRLKKALYGLKQAPRAWYSQIDQYFIQKGFAKSIS 943
>emb|CAE04657.2| OSJNBa0061G20.13 [Oryza sativa Japonica Group]
Length = 1122
Score = 113 bits (283), Expect = 2e-23
Identities = 50/105 (47%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q++G+D+ + FAP+A+M+T+ +++LA +KGWE+HH+DVKSAFLNG + EE+Y+ +P +
Sbjct: 723 QQQGVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGDLEEEVYVVQPPGF 782
Query: 181 KDQNNLSCI--ILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISD 309
D+ N S + + K+LYGL+QAPRAW KL+ L + F KS ++
Sbjct: 783 DDKTNASKVLKLRKALYGLRQAPRAWNAKLDSTLLSLKFNKSATE 827
>emb|CAH66692.1| OSIGBa0097A15.7 [Oryza sativa Indica Group]
Length = 1122
Score = 113 bits (283), Expect = 2e-23
Identities = 50/105 (47%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q++G+D+ + FAP+A+M+T+ +++LA +KGWE+HH+DVKSAFLNG + EE+Y+ +P +
Sbjct: 723 QQQGVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGDLEEEVYVVQPPGF 782
Query: 181 KDQNNLSCI--ILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISD 309
D+ N S + + K+LYGL+QAPRAW KL+ L + F KS ++
Sbjct: 783 DDKTNASKVLKLRKALYGLRQAPRAWNAKLDSTLLSLKFNKSATE 827
>gb|AAY87201.1| reverse transcriptase [Nymphaea tetragona]
Length = 140
Score = 113 bits (282), Expect = 3e-23
Identities = 53/103 (51%), Positives = 73/103 (70%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QK GIDY +TFAP+AKM+T+ IIS+A KGW++ +DVK+ FLNG + EE+YM+ P Y
Sbjct: 16 QKYGIDYLETFAPVAKMKTVRIIISVAVVKGWKMSKLDVKNVFLNGDLEEEVYMRMPPGY 75
Query: 181 KDQNNLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISD 309
D N C + K++YGLKQ+PRAW+++L L GFT+ D
Sbjct: 76 -DVNGKCCRLKKAIYGLKQSPRAWFERLRRVLIQDGFTQGNGD 117
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 113 bits (282), Expect = 3e-23
Identities = 52/104 (50%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QKEG+DY +TFAP+AKM T+ + +A + W +H +DV +AFL+G + EE+YMK P+ +
Sbjct: 671 QKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGF 730
Query: 181 K-DQNNLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISD 309
+ D + C + KSLYGLKQAPR W+ KL L GFT+S+SD
Sbjct: 731 QCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSD 774
>emb|CAA78285.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
gi|54606703|dbj|BAD66726.1| orf167b [Beta vulgaris
subsp. vulgaris] gi|54606747|dbj|BAD66770.1| orf167b
[Beta vulgaris subsp. vulgaris]
Length = 167
Score = 113 bits (282), Expect = 3e-23
Identities = 54/125 (43%), Positives = 84/125 (67%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
Q+ G+D +TF+P+ K TI +++SLA K W +H +DVK+AFL+G + E +YM +P +
Sbjct: 28 QQVGVDCGETFSPVVKPATIRTVLSLALSKSWPIHQLDVKNAFLHGELKETVYMHQPLGF 87
Query: 181 KDQN--NLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISDPKPILHRINTREVLL 354
KD + N C++ KSLYGLKQAPRAWYK+ ++S+ GF++S SD ++R T +
Sbjct: 88 KDPDRPNHVCLLRKSLYGLKQAPRAWYKRFAGYVSSIGFSQSQSDNSLFIYRNGTTLAYI 147
Query: 355 AFHVN 369
+V+
Sbjct: 148 LLYVD 152
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 113 bits (282), Expect = 3e-23
Identities = 52/104 (50%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QKEG+DY +TFAP+AKM T+ + +A + W +H +DV +AFL+G + EE+YMK P+ +
Sbjct: 671 QKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGF 730
Query: 181 K-DQNNLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISD 309
+ D + C + KSLYGLKQAPR W+ KL L GFT+S+SD
Sbjct: 731 QCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSD 774
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 113 bits (282), Expect = 3e-23
Identities = 52/104 (50%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 QKEGIDYKDTFAPIAKMQTI*SIISLATKKGWELHHIDVKSAFLNGGITEEIYMKKPKCY 180
QKEG+DY +TFAP+AKM T+ + +A + W +H +DV +AFL+G + EE+YMK P+ +
Sbjct: 1030 QKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGF 1089
Query: 181 K-DQNNLSCIILKSLYGLKQAPRAWYKKLEEFLSTQGFTKSISD 309
+ D + C + KSLYGLKQAPR W+ KL L GFT+S+SD
Sbjct: 1090 QCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSD 1133