BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00024647
         (675 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   171   2e-40
gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus pe...   170   3e-40
ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citr...   169   7e-40
ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, ...   168   1e-39
ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II su...   168   1e-39
ref|XP_006406782.1| hypothetical protein EUTSA_v10021989mg [Eutr...   167   2e-39
ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II su...   167   2e-39
gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypepti...   167   3e-39
ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II su...   166   5e-39
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   166   5e-39
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ...   166   6e-39
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   166   8e-39
gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus...   164   2e-38
ref|XP_006414371.1| hypothetical protein EUTSA_v10026603mg [Eutr...   164   2e-38
ref|XP_002312337.1| DNA-directed RNA polymerase II family protei...   164   2e-38
ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II su...   164   3e-38
ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arab...   164   3e-38
ref|XP_001782379.1| predicted protein [Physcomitrella patens] gi...   164   3e-38
ref|NP_567490.1| RNA polymerases subunit NRP(B/D/E)9b  [Arabidop...   164   3e-38
ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, ...   163   4e-38

>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  171 bits (432), Expect = 2e-40
 Identities = 75/114 (65%), Positives = 91/114 (79%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + +D+K L YACR+C+H E AD+N VYR EI  A+ + + V  
Sbjct: 1   MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT+ VRCA CNHGEA FFQA+ RGEEGMTLFFVCCNP+CGHRWR+
Sbjct: 61  DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica]
          Length = 114

 Score =  170 bits (431), Expect = 3e-40
 Identities = 75/114 (65%), Positives = 90/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + KDQK L YACR+C+H E AD+N VYR EI  A+ + + +  
Sbjct: 1   MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQILQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT+ VRC+ C HGEA FFQA+ RGEEGMTLFFVCCNPSCGHRWR+
Sbjct: 61  DVAADPTLPRTKAVRCSECKHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 114


>ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citrus clementina]
           gi|568871362|ref|XP_006488857.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 9A-like [Citrus
           sinensis] gi|557521280|gb|ESR32647.1| hypothetical
           protein CICLE_v10006256mg [Citrus clementina]
          Length = 114

 Score =  169 bits (428), Expect = 7e-40
 Identities = 74/114 (64%), Positives = 89/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + KDQK L YACR+C+H E AD+N VYR E+  ++ + + V  
Sbjct: 1   MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEVHHSVGERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT+ VRC  C HGEA FFQA+ RGEEGMTLFFVCCNP+CGHRWRE
Sbjct: 61  DVAADPTLPRTKAVRCVKCQHGEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRE 114


>ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           9B-like [Oryza brachyantha]
          Length = 114

 Score =  168 bits (426), Expect = 1e-39
 Identities = 74/114 (64%), Positives = 89/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + +DQK L YACR+C+H E AD+N VYR  +  +  + + V  
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+  DP+LPRT++VRCAVC HGEA FFQA+ RGEEGMTLFFVCCNPSCGHRWRE
Sbjct: 61  DVAGDPTLPRTKSVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114


>ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Cicer
           arietinum]
          Length = 114

 Score =  168 bits (426), Expect = 1e-39
 Identities = 73/114 (64%), Positives = 90/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + +DQ+NL YACR+C+H E AD+  VYR EI  ++ + + V  
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQRNLLYACRNCDHQEVADNYCVYRNEIHHSVGERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT+ VRC  CNHGEA FFQA+ RGEEGMTLFFVCCNP+CGHRWR+
Sbjct: 61  DVAADPTLPRTKAVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_006406782.1| hypothetical protein EUTSA_v10021989mg [Eutrema salsugineum]
           gi|557107928|gb|ESQ48235.1| hypothetical protein
           EUTSA_v10021989mg [Eutrema salsugineum]
          Length = 114

 Score =  167 bits (424), Expect = 2e-39
 Identities = 72/114 (63%), Positives = 91/114 (79%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + K+QK L YACR+CEH E AD++ VYR E+  ++++ + +  
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCEHQEAADNSCVYRNEVHHSVSERTQILT 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ +DP+LPRT+ VRCA C HGEA FFQA+ RGEEGMTLFFVCCNP+CGHRWRE
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114


>ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Solanum lycopersicum] gi|565378585|ref|XP_006355736.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 9A-like [Solanum tuberosum]
          Length = 114

 Score =  167 bits (424), Expect = 2e-39
 Identities = 73/114 (64%), Positives = 91/114 (79%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + K+QK L YACR+C+H E A++N VYR EI  + A+ + V  
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSAAERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT++VRC+ C HGEA FFQA+ RGEEGMTLFFVCCNP+CGHRWR+
Sbjct: 61  DVAADPTLPRTKSVRCSQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|125537020|gb|EAY83508.1| hypothetical protein
           OsI_38722 [Oryza sativa Indica Group]
           gi|125579719|gb|EAZ20865.1| hypothetical protein
           OsJ_36504 [Oryza sativa Japonica Group]
          Length = 114

 Score =  167 bits (423), Expect = 3e-39
 Identities = 74/114 (64%), Positives = 88/114 (77%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + +DQK L YACR+C+H E AD+N VYR  +  +  + + V  
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+  DP+LPRT+ VRCAVC HGEA FFQA+ RGEEGMTLFFVCCNPSCGHRWRE
Sbjct: 61  DVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114


>ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Brachypodium distachyon] gi|326497375|dbj|BAK02272.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 114

 Score =  166 bits (421), Expect = 5e-39
 Identities = 73/114 (64%), Positives = 88/114 (77%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + +DQK L +ACR+C+H E AD+N VYR  +  +  + + V  
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+  DP+LPRT+ VRCAVC HGEA FFQA+ RGEEGMTLFFVCCNPSCGHRWRE
Sbjct: 61  DVAGDPTLPRTKEVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114


>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  166 bits (421), Expect = 5e-39
 Identities = 72/114 (63%), Positives = 92/114 (80%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + ++QK L YACR+C+H E A++N VYR EI  ++ + + V  
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT++VRCA CNHGEA FFQA+ RGEEGMTLFFVCCNP+CG+RWR+
Sbjct: 61  DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
           gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
           subunit C11/M/9 [Medicago truncatula]
           gi|217075262|gb|ACJ85991.1| unknown [Medicago
           truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
           polymerase II subunit RPB9 [Medicago truncatula]
           gi|388497558|gb|AFK36845.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  166 bits (420), Expect = 6e-39
 Identities = 73/114 (64%), Positives = 90/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + ++QK L YACR+C+H E AD+  VYR EI  ++A+ + V  
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT+ VRC  CNHGEA FFQA+ RGEEGMTLFFVCCNP+CGHRWR+
Sbjct: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  166 bits (419), Expect = 8e-39
 Identities = 72/114 (63%), Positives = 91/114 (79%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + +DQK L +ACR+C+H E AD+  VYR EI  ++ + + V  
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT++VRC+ CNHGEA FFQA+ RGEEGMTLFFVCCNP+CGHRWR+
Sbjct: 61  DVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris]
          Length = 114

 Score =  164 bits (416), Expect = 2e-38
 Identities = 72/114 (63%), Positives = 90/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + +DQK L YACR+C+H E AD+  VYR EI  ++ + + V  
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT++VRC  CNHGEA FFQA+ RGEEGMTLFFVCCNP+CG+RWR+
Sbjct: 61  DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_006414371.1| hypothetical protein EUTSA_v10026603mg [Eutrema salsugineum]
           gi|557115541|gb|ESQ55824.1| hypothetical protein
           EUTSA_v10026603mg [Eutrema salsugineum]
          Length = 114

 Score =  164 bits (416), Expect = 2e-38
 Identities = 71/114 (62%), Positives = 89/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + K+Q  L YACR+CEH E AD+N VYR E+  ++++ + +  
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQAILLYACRNCEHQEAADNNCVYRNEVHHSVSEQTQILS 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ +DP+LPRT+ VRCA C HGEA FFQA+ RGEEGMTLFFVCCNP+C HRWRE
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114


>ref|XP_002312337.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
           gi|222852157|gb|EEE89704.1| DNA-directed RNA polymerase
           II family protein [Populus trichocarpa]
          Length = 114

 Score =  164 bits (416), Expect = 2e-38
 Identities = 72/114 (63%), Positives = 88/114 (77%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + +DQK L YACR+C+H E AD N VYR E+  ++A+ + V  
Sbjct: 1   MSTMKFCRECNNILYPREDRDQKILLYACRNCDHQEIADDNCVYRNEVHHSVAERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT+ V C VC H EA FFQA+ RGEEGMTLFFVCCNP+CGHRWR+
Sbjct: 61  DVAADPTLPRTKAVTCTVCKHPEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Fragaria vesca subsp. vesca]
          Length = 114

 Score =  164 bits (414), Expect = 3e-38
 Identities = 71/114 (62%), Positives = 90/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP ++K+ K L YACR+C+H E AD+N VYR EI  ++ + + +  
Sbjct: 1   MSTMKFCRECNNILYPKENKEDKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQILQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT+ VRCA C HGEA FFQA+ RGEEGMTLFFVCCNP+CG+RWR+
Sbjct: 61  DVAADPTLPRTKAVRCAQCKHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arabidopsis lyrata subsp.
           lyrata] gi|297328876|gb|EFH59295.1| hypothetical protein
           ARALYDRAFT_318462 [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score =  164 bits (414), Expect = 3e-38
 Identities = 70/114 (61%), Positives = 90/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + K+QK L YACR+C+H E AD++ VYR E+  ++++ + +  
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ +DP+LPRT+ VRCA C H EA FFQA+ RGEEGMTLFFVCCNP+CGHRWRE
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHSEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114


>ref|XP_001782379.1| predicted protein [Physcomitrella patens]
           gi|162666171|gb|EDQ52833.1| predicted protein
           [Physcomitrella patens]
          Length = 114

 Score =  164 bits (414), Expect = 3e-38
 Identities = 72/114 (63%), Positives = 90/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + +D+K L YACR+C+H E AD+N VYR E+  +  + + V  
Sbjct: 1   MSTMKFCRECNNILYPREDRDKKVLLYACRNCDHQEVADNNCVYRNEVLHSADERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           DI +DP+LPRT+NVRCA C HGEA FFQA+ RGEEGMTLFFVCCNP+CG+RWR+
Sbjct: 61  DIASDPTLPRTKNVRCANCQHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|NP_567490.1| RNA polymerases subunit NRP(B/D/E)9b  [Arabidopsis thaliana]
           gi|297800522|ref|XP_002868145.1| hypothetical protein
           ARALYDRAFT_493259 [Arabidopsis lyrata subsp. lyrata]
           gi|565447067|ref|XP_006284789.1| hypothetical protein
           CARUB_v10006057mg [Capsella rubella]
           gi|75153888|sp|Q8L5V0.1|RPB9B_ARATH RecName:
           Full=DNA-directed RNA polymerases II, IV and V subunit
           9B gi|21537166|gb|AAM61507.1| RNA Polymerase II subunit
           14.5 kD, putative [Arabidopsis thaliana]
           gi|114050701|gb|ABI49500.1| At4g16265 [Arabidopsis
           thaliana] gi|297313981|gb|EFH44404.1| hypothetical
           protein ARALYDRAFT_493259 [Arabidopsis lyrata subsp.
           lyrata] gi|332658323|gb|AEE83723.1| RNA polymerases
           subunit NRP(B/D/E)9b [Arabidopsis thaliana]
           gi|482553494|gb|EOA17687.1| hypothetical protein
           CARUB_v10006057mg [Capsella rubella]
          Length = 114

 Score =  164 bits (414), Expect = 3e-38
 Identities = 70/114 (61%), Positives = 89/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + K+Q  L YACR+C+H E AD+N VYR E+  ++++ + +  
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ +DP+LPRT+ VRCA C HGEA FFQA+ RGEEGMTLFFVCCNP+C HRWRE
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114


>ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           9A-like [Glycine max]
          Length = 114

 Score =  163 bits (413), Expect = 4e-38
 Identities = 71/114 (62%), Positives = 90/114 (78%)
 Frame = +1

Query: 40  MSFMKFCSLCHNILYPTDSKDQKNLQYACRHCEHTEEADSNIVYRKEIRPALAQTSHVPL 219
           MS MKFC  C+NILYP + ++QK L +ACR+C+H E AD+  VYR EI+  + + + V  
Sbjct: 1   MSAMKFCRECNNILYPKEDREQKVLLFACRNCDHQEVADNFCVYRNEIQHPVGERTQVLQ 60

Query: 220 DIVADPSLPRTRNVRCAVCNHGEAGFFQASERGEEGMTLFFVCCNPSCGHRWRE 381
           D+ ADP+LPRT++VRC  CNHGEA FFQA+ RGEEGMTLFFVCCNP+CGHRWR+
Sbjct: 61  DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114