BLASTX nr result

ID: Ephedra27_contig00024626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00024626
         (383 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB88628.1| 85 kDa cold acclimation protein [Spinacia oleracea]     65   9e-09

>gb|AAB88628.1| 85 kDa cold acclimation protein [Spinacia oleracea]
          Length = 535

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
 Frame = +3

Query: 123 PAPPLQYNKETAKHGHGNEEGA-GIMDKIDDS---KSEEDHNQYHHEEGDEKEKRYMDKI 290
           PAP   YN     H H +EE    ++DKI D    + E+  N YHH + +EK+   +DKI
Sbjct: 201 PAPDHNYNTH---HVHQDEENKDSVLDKIKDKLPGQHEDKKNDYHHHQEEEKKDSVLDKI 257

Query: 291 K-------EQKNEEYHYHGMEGEKKLGLMDKFKQKLHG 383
           K       E K  +YH+H  E EKK G++DK K KL G
Sbjct: 258 KDKMSGQHEDKKNDYHHH-QEEEKKGGVLDKIKDKLPG 294


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