BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00024540
         (431 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutr...    69   9e-10
ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containi...    63   4e-08
ref|XP_006391819.1| hypothetical protein EUTSA_v10023349mg [Eutr...    63   5e-08
gb|EPS72442.1| hypothetical protein M569_02312, partial [Genlise...    62   6e-08
ref|XP_002889252.1| pentatricopeptide repeat-containing protein ...    62   1e-07
ref|NP_199422.1| pentatricopeptide repeat-containing protein [Ar...    61   1e-07
ref|XP_006391798.1| hypothetical protein EUTSA_v10023987mg [Eutr...    61   1e-07
ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_006405989.1| hypothetical protein EUTSA_v10028308mg [Eutr...    61   2e-07
ref|XP_006398290.1| hypothetical protein EUTSA_v10000872mg [Eutr...    61   2e-07
ref|XP_006838835.1| hypothetical protein AMTR_s00002p00263570 [A...    61   2e-07
gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocar...    61   2e-07
ref|NP_178072.1| pentatricopeptide repeat-containing protein [Ar...    61   2e-07
ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [A...    60   3e-07
ref|XP_002863429.1| pentatricopeptide repeat-containing protein ...    60   4e-07
ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus pe...    59   7e-07
gb|AFK48607.1| unknown [Medicago truncatula]                           59   7e-07
ref|XP_003590199.1| Pentatricopeptide repeat-containing protein ...    59   7e-07
ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selag...    59   7e-07

>ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutrema salsugineum]
           gi|557086312|gb|ESQ27164.1| hypothetical protein
           EUTSA_v10018150mg [Eutrema salsugineum]
          Length = 781

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
 Frame = +2

Query: 5   EFAGKLFGFMSGKGYALDAYARNMFVKCLSEKGR----FEIVMKVF--DGCSVEVRDYNY 166
           E A +LF  M   G++ D+ A N  +    + GR    FE+ +++F  DG  + +R Y+ 
Sbjct: 252 EDARRLFHEMKAGGHSPDSAALNALLDGFCKSGRMVEAFEL-LRLFEKDGFILGLRGYSS 310

Query: 167 LISGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKG 346
           LI GL R  R     E++A ML  ++    ++Y  ++  L  A + E  +KLF  MSSKG
Sbjct: 311 LIDGLFRASRYDEAFELYATMLEKNIKPDVLLYTILIRGLSKAGKIEDALKLFSSMSSKG 370

Query: 347 VRLNVHACNELVKGLCKNG 403
           +R + +  N ++K LC+ G
Sbjct: 371 IRPDTYCYNAVIKALCEQG 389


>ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 761

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
 Frame = +2

Query: 23  FGF---MSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFD-----GCSVEVRDYNYLISG 178
           FGF   M+ +G++ D Y  N  VK L   G  +  +++ D     G  +++  YN L+SG
Sbjct: 287 FGFIEKMAKEGFSPDQYTFNTLVKGLCRVGHVKHALEIMDVMLQEGFDLDIYTYNALVSG 346

Query: 179 LIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRLN 358
           L +   I    ++  +M+  D     V Y  ++  L      E   KL   ++SKG+  +
Sbjct: 347 LCKLGEIEEAVDILDQMVSRDCSPNTVTYNTLISTLCKENRVEEATKLARVLTSKGIIPD 406

Query: 359 VHACNELVKGLCKNGRFGSGMKVF 430
           V   N L++GLC N      M++F
Sbjct: 407 VCTVNSLIQGLCLNSNHKVAMELF 430


>ref|XP_006391819.1| hypothetical protein EUTSA_v10023349mg [Eutrema salsugineum]
           gi|557088325|gb|ESQ29105.1| hypothetical protein
           EUTSA_v10023349mg [Eutrema salsugineum]
          Length = 626

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
 Frame = +2

Query: 20  LFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFDG-----CSVEVRDYNYLISGLI 184
           LF  M  KG   + Y  N  + C    GR+    ++         + +V  +N LI   +
Sbjct: 274 LFNEMENKGVKPNVYTYNSLISCFCNYGRWSDASRLLSDMIERKLNPDVVSFNALIDAFV 333

Query: 185 RCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRLNVH 364
           +  ++   EE++  M+R  V    + Y  ++         +   ++F FM SKG   ++ 
Sbjct: 334 KEGKLLEAEELYEEMIRRSVTPNTITYNSLINGFSMHDRLDEAKRMFEFMVSKGCFPDIV 393

Query: 365 ACNELVKGLCKNGRFGSGMKVF 430
            CN L+ GLCK+ R   GM++F
Sbjct: 394 TCNTLINGLCKSKRVEDGMELF 415



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
 Frame = +2

Query: 11  AGKLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFDGCSV-----EVRDYNYLIS 175
           A ++F FM  KG   D    N  +  L +  R E  M++F   S+     +   YN LI 
Sbjct: 376 AKRMFEFMVSKGCFPDIVTCNTLINGLCKSKRVEDGMELFREMSLRGIVGDTITYNTLIQ 435

Query: 176 GLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRL 355
           G  +     + +E+F  M+   VP   V Y+ ++  L + ++ E  + +F  M   G++L
Sbjct: 436 GYFQAGDCDNAQEIFKHMVLGGVPRDIVTYSNLLHGLCNNEKLEKALIIFQDMQKSGIKL 495

Query: 356 NVHACNELVKGLCKNGRFGSGMKVF 430
           ++   + +++G+CK G+      +F
Sbjct: 496 SIVTYSIIIEGMCKAGKVEDAWDLF 520


>gb|EPS72442.1| hypothetical protein M569_02312, partial [Genlisea aurea]
          Length = 1037

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
 Frame = +2

Query: 17  KLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFD-----GCSVEVRDYNYLISGL 181
           K+F  M  +G   D+ + NM +KC S+  + +  +++F+      C  +V   N LI  L
Sbjct: 414 KIFDEMRQRGLMPDSVSYNMMIKCYSKSSKADEAVRLFNEMIENSCHPDVIVVNSLIDTL 473

Query: 182 IRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRLNV 361
            +  R     E+F +M  L++    V Y  ++  +  A E     +LF  M++KG   NV
Sbjct: 474 YKAGRPDEAWEMFCKMEELNLSPTVVTYNTLLAGMGKAGEVRKSYELFRNMAAKGCPPNV 533

Query: 362 HACNELVKGLCKNGRFGSGMKV 427
              N L+ GLC+NG     +KV
Sbjct: 534 ITFNTLLDGLCRNGEVDLALKV 555


>ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335093|gb|EFH65511.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 780

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
 Frame = +2

Query: 5   EFAGKLFGFMSGKGYALDAYARNMFVKCLSEKGR----FEIVMKVF--DGCSVEVRDYNY 166
           E A KLF  M   G   D+ A N  +    + GR    FE+ +++F  DG  + +R Y+ 
Sbjct: 250 EDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFEL-LRLFEKDGFVLGLRGYSS 308

Query: 167 LISGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKG 346
           LI GL R  R     E++A ML+ ++    ++Y  ++  L  A + E  +KL   M SKG
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKG 368

Query: 347 VRLNVHACNELVKGLCKNGRFGSG 418
           +  + +  N ++K LC  G    G
Sbjct: 369 ITPDTYCYNAVIKALCGRGLLEEG 392


>ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g46100 gi|9757730|dbj|BAB08255.1| salt-inducible
           protein-like [Arabidopsis thaliana]
           gi|332007954|gb|AED95337.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
 Frame = +2

Query: 71  NMFVKCLSEK-GRFEIVMKVF-----DGCSVEVRDYNYLISGLIRCLRIGSTEEVFARML 232
           N+ +K L    G  +  +K+F      GC  +   Y  LISGL R  RI   +++F  M+
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219

Query: 233 RLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRLNVHACNELVKGLCKNGRFG 412
             D     V Y  ++  L  +K  +  ++    M SKG+  NV   + L+ GLCK+GR  
Sbjct: 220 EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSL 279

Query: 413 SGMKVF 430
             M++F
Sbjct: 280 QAMELF 285


>ref|XP_006391798.1| hypothetical protein EUTSA_v10023987mg [Eutrema salsugineum]
           gi|557088304|gb|ESQ29084.1| hypothetical protein
           EUTSA_v10023987mg [Eutrema salsugineum]
          Length = 654

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
 Frame = +2

Query: 20  LFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFDGC-----SVEVRDYNYLISGLI 184
           LF  M  KG   +    N  + CL   GR+    ++         + +V  +N LI  L+
Sbjct: 302 LFNEMENKGIKPNVITYNSLISCLCNYGRWSDTSRLLSDMIKRKLNPDVVTFNALIDALM 361

Query: 185 RCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRLNVH 364
           +  ++   EE++  M+R  +    + Y+ ++         +   ++  FM SKG   ++ 
Sbjct: 362 KEGKLLEAEELYKEMIRRSIDPDTITYSSLINGFCMHDRLDEAERMVEFMVSKGCFPDIV 421

Query: 365 ACNELVKGLCKNGRFGSGMKVF 430
            CN L+ GLCK+ R   GM+VF
Sbjct: 422 TCNTLINGLCKSKRVEDGMEVF 443


>ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X1 [Cicer arietinum]
           gi|502153968|ref|XP_004509526.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X2 [Cicer arietinum]
           gi|502153970|ref|XP_004509527.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X3 [Cicer arietinum]
           gi|502153972|ref|XP_004509528.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X4 [Cicer arietinum]
           gi|502153974|ref|XP_004509529.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X5 [Cicer arietinum]
           gi|502153976|ref|XP_004509530.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X6 [Cicer arietinum]
           gi|502153978|ref|XP_004509531.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X7 [Cicer arietinum]
           gi|502153980|ref|XP_004509532.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X8 [Cicer arietinum]
           gi|502153982|ref|XP_004509533.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X9 [Cicer arietinum]
           gi|502153984|ref|XP_004509534.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X10 [Cicer arietinum]
          Length = 835

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
 Frame = +2

Query: 5   EFAGKLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVF-----DGCSVEVRDYNYL 169
           E A KL   M  KG+  D Y  N  +K L++KG+ + V KV       G    V  Y  +
Sbjct: 551 EEAFKLKEEMVNKGFKPDTYTYNFLMKGLTDKGKIDDVDKVLHEALEHGMVPNVYTYALM 610

Query: 170 ISGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGV 349
           + G  +  RI +   +F  ++  +V L  VVY  ++     A  F    KL   M S G+
Sbjct: 611 LEGYCKADRIDNAVSLFNNLVNKEVELSSVVYNILIAAHSKAGNFMEAFKLRDAMKSSGI 670

Query: 350 RLNVHACNELVKGLCKNGRFGSGMKVF 430
              +   + L+ G+C+ GR     ++F
Sbjct: 671 LPTIQTYSSLIHGMCRIGRVEEAKEIF 697


>ref|XP_006405989.1| hypothetical protein EUTSA_v10028308mg [Eutrema salsugineum]
           gi|557107127|gb|ESQ47442.1| hypothetical protein
           EUTSA_v10028308mg [Eutrema salsugineum]
          Length = 823

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
 Frame = +2

Query: 2   FEFAGKLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFD-----GCSVEVRDYNY 166
           F  A  L+  M  +G   +A   N  +    +K R +   ++FD     GCS +V  +N 
Sbjct: 349 FSEAEDLYEEMLHRGIVPNAITYNSMIDGFCKKNRLDEAKQMFDSMASKGCSPDVVTFNT 408

Query: 167 LISGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKG 346
           LI G  R  RI    ++   M R  +    V +  ++       +   V+ +F  M+S  
Sbjct: 409 LIDGCCRTKRIDDGMDLLHEMTRRRIVADTVTFNTLIHGFFQVGDLNGVLDIFQEMTSTD 468

Query: 347 VRLNVHACNELVKGLCKNGRFGSGMKVF 430
           VR N+   N L+ GLC NG+    + +F
Sbjct: 469 VRPNIVTLNTLLDGLCNNGKLEKALTIF 496



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
 Frame = +2

Query: 2   FEFAGKLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFD-----GCSVEVRDYNY 166
           F  A +L+  M  +G   D    N  +    ++ R +   ++FD     GCS +V  YN 
Sbjct: 535 FSEAEELYEKMLHRGIVPDTITYNSMINGFCKQNRLDEAKQMFDLMVSNGCSSDVVTYNT 594

Query: 167 LISGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKG 346
           LI G  R  R+    ++   M R  +    V Y  ++  L    +      LF  M+S G
Sbjct: 595 LIDGCCRTKRVDDGMDLLHEMSRRQIVANTVTYNTLIHGLCQVGDLNAAQDLFLNMNSHG 654

Query: 347 VRLNVHACNELVKGLCKNGRFGSGMKVF 430
           V  ++   N L+ GLC NG+    +++F
Sbjct: 655 VCPDILTYNILLDGLCDNGKLKKALEMF 682


>ref|XP_006398290.1| hypothetical protein EUTSA_v10000872mg [Eutrema salsugineum]
           gi|557099379|gb|ESQ39743.1| hypothetical protein
           EUTSA_v10000872mg [Eutrema salsugineum]
          Length = 472

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
 Frame = +2

Query: 5   EFAGKLFGFMSGKGYALDAYARNMFVKCLSE-KGRFEIVMKVFD-----GCSVEVRDYNY 166
           + A K +  M   G   +  + N+ +K L   +G  +  +K+F      GC  +   Y  
Sbjct: 138 KLAFKFYKNMREMGLPPNVASLNVLIKALCRNEGTVDAGLKIFHEMPKRGCDPDSYTYGT 197

Query: 167 LISGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKG 346
           LISGL R  RI   +++F  M+  D     V Y  ++  L  +K  +  ++    M S+G
Sbjct: 198 LISGLCRFGRIDEAKKLFKEMVEKDCAPTVVTYTSMIHGLCGSKNVDEGIRYLEEMKSRG 257

Query: 347 VRLNVHACNELVKGLCKNGRFGSGMKVF 430
           +  NV   + L+ GLCK+GR    M++F
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRPLQAMELF 285


>ref|XP_006838835.1| hypothetical protein AMTR_s00002p00263570 [Amborella trichopoda]
           gi|548841341|gb|ERN01404.1| hypothetical protein
           AMTR_s00002p00263570 [Amborella trichopoda]
          Length = 646

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
 Frame = +2

Query: 11  AGKLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFDGCSVE-----VRDYNYLIS 175
           A KLF  M   GY  DA + N+ +    +  + +  +K F G   +     +  YN LI 
Sbjct: 353 AVKLFKSMVEWGYEHDAISYNVLINGFCKCSKVDEAIKTFGGMVYKGIKPTIVTYNTLIQ 412

Query: 176 GLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRL 355
           GL +  R+G  E++F  M     P   + Y  ++  L      +  ++LF  +  +G +L
Sbjct: 413 GLCQDGRVGEAEKLFNSMRHQGHPPELLTYTIMIDGLCMENRLDDAMELFEIVEGRGHKL 472

Query: 356 NVHACNELVKGLCKNGRFGSGMKVF 430
           +V   N ++ G CK G+F + MK+F
Sbjct: 473 HVKMFNTILSGFCKAGKFQNVMKLF 497


>gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocarpus longan]
          Length = 763

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
 Frame = +2

Query: 2   FEFAGKLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVF-----DGCSVEVRDYNY 166
           F+ A KLF  M  KG   D +  NM +  L  +G+ E  +++       GC   V  YN 
Sbjct: 426 FKAAMKLFEEMKNKGCQPDEFTYNMLIDSLCSRGKVEEALRLLKEMESSGCPRNVVTYNT 485

Query: 167 LISGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKG 346
           LI+GL +  +I   EE+F  M    +    V Y  ++  L  ++  E   +L   M  +G
Sbjct: 486 LIAGLCKIKKIEDAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRLEDAAQLMDQMIMEG 545

Query: 347 VRLNVHACNELVKGLCKNG 403
           ++ +    N L+   C++G
Sbjct: 546 LKPDKFTYNSLLTYYCRSG 564



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
 Frame = +2

Query: 32  MSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFD-----GCSVEVRDYNYLISGLIRCLR 196
           ++ +G+  D +  N  V  L + G  +  ++V D     G   +V  YN LISG  +   
Sbjct: 296 VASEGFYPDQFTFNTLVNGLCKTGHVKQALEVMDVMLQAGFDPDVFTYNSLISGFCKLGE 355

Query: 197 IGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRLNVHACNE 376
           +    E+  +M+  D     V Y  ++  L    + E   +L   ++SKG+  +V   N 
Sbjct: 356 VEEAVEILDQMILRDCSPNTVTYNTLISTLCKENQIEEATELARALTSKGILPDVCTFNS 415

Query: 377 LVKGLCKNGRFGSGMKVF 430
           L++GLC    F + MK+F
Sbjct: 416 LIQGLCLTRNFKAAMKLF 433


>ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g79540 gi|4835755|gb|AAD30222.1|AC007202_4 Contains
           similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
           gi|332198140|gb|AEE36261.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
 Frame = +2

Query: 11  AGKLFGFMSGKGYALDAYARNMFVKCLSEKGR----FEIVMKVF--DGCSVEVRDYNYLI 172
           A KLF  M   G   D+ A N  +    + GR    FE+ +++F  DG  + +R Y+ LI
Sbjct: 252 ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL-LRLFEKDGFVLGLRGYSSLI 310

Query: 173 SGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVR 352
            GL R  R     E++A ML+ ++    ++Y  ++  L  A + E  +KL   M SKG+ 
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370

Query: 353 LNVHACNELVKGLCKNGRFGSG 418
            + +  N ++K LC  G    G
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEG 392


>ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [Amborella trichopoda]
           gi|548847948|gb|ERN07051.1| hypothetical protein
           AMTR_s00019p00039970 [Amborella trichopoda]
          Length = 1123

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
 Frame = +2

Query: 8   FAGKLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFD-----GCSVEVRDYNYLI 172
           F  +L+  M   GY  D  +  + +  L + GR    +K+ D     G S     YN LI
Sbjct: 361 FVWELWREMEAYGYGTDVVSFTLLINALCKVGRVGEALKMLDVMEKKGISANPHTYNTLI 420

Query: 173 SGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEF-EFVVKLFGFMSSKGV 349
            GL++  R+G  +E+F   + L  P   V    I I       + +  +++FG M +KG+
Sbjct: 421 LGLLKVDRLGEAQELF-EFMGLHGPQPTVYTYIIFIDYFGKSGYPQKALEIFGRMKNKGI 479

Query: 350 RLNVHACNELVKGLCKNGRFGSGMKVF 430
             NV ACN  +  L + GR G    VF
Sbjct: 480 VPNVVACNVCLHNLAELGRLGEAKDVF 506


>ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309264|gb|EFH39688.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 472

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
 Frame = +2

Query: 71  NMFVKCLSEK-GRFEIVMKVFD-----GCSVEVRDYNYLISGLIRCLRIGSTEEVFARML 232
           N+ +K L    G  +  +K+F      GC  +   Y  LISGL R  RI   +++F  M+
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219

Query: 233 RLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRLNVHACNELVKGLCKNGRFG 412
             D     V Y  ++  L  +K  +  ++    M  KG+  NV   + L+ GLCK+GR  
Sbjct: 220 EKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSL 279

Query: 413 SGMKVF 430
             M++F
Sbjct: 280 QAMELF 285


>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
 Frame = +2

Query: 5   EFAGKLFGFMSGKGYALDAYARNMFVKCLSEK-GRFEIVMKVFD-----GCSVEVRDYNY 166
           + A + + +M   G      + N+ +K L +  G  +  +++F      GC  +   Y  
Sbjct: 137 KLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGT 196

Query: 167 LISGLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKG 346
           LI+GL R  +IG  +E+F  M         V Y  ++  L  +K+ +  ++L   M+SKG
Sbjct: 197 LINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKG 256

Query: 347 VRLNVHACNELVKGLCKNG 403
           ++ NV   + L+ G CK+G
Sbjct: 257 IKPNVFTYSSLMDGHCKSG 275


>gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus persica]
          Length = 772

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
 Frame = +2

Query: 32  MSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFD-----GCSVEVRDYNYLISGLIRCLR 196
           MS +G++ D +  N  VK L   G  +  +++ D     G  +++  YN L+SGL +   
Sbjct: 305 MSNEGFSPDQFTFNTLVKGLCRVGHVKHALEIMDVMLQQGFDLDIYTYNSLVSGLCKLGE 364

Query: 197 IGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRLNVHACNE 376
           I    E+  +M+  D     V Y  ++  L      E   KL   ++SKG+  +V   N 
Sbjct: 365 IEEAVEILDQMVSRDCSPNTVTYNTLISTLCKENRVEEATKLARVLTSKGILPDVCTVNS 424

Query: 377 LVKGLCKNGRFGSGMKVF 430
           L++GL  N    + +++F
Sbjct: 425 LIQGLFLNSNHKAAVELF 442


>gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
 Frame = +2

Query: 20  LFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFDGCSVE-----VRDYNYLISGLI 184
           LF  M  +    D Y  N+ V    ++GR +    V D   ++     V  +N L+ G  
Sbjct: 265 LFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFC 324

Query: 185 RCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRLNVH 364
           +  ++   + VFA M++  +    V Y  ++      K+     K+F  MS +GV  NVH
Sbjct: 325 KDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVH 384

Query: 365 ACNELVKGLCKNGRFGSGMKVF 430
           + N ++ G CK  +    MK+F
Sbjct: 385 SYNIMINGFCKIKKVDKAMKLF 406


>ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479247|gb|AES60450.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 834

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
 Frame = +2

Query: 11  AGKLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVFDGCSVE-----VRDYNYLIS 175
           A  +F  M+  G   D ++ ++ +  LS+    +  M +F+G   E     V  Y+ LI 
Sbjct: 313 AKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLID 372

Query: 176 GLIRCLRIGSTEEVFARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVRL 355
           GL +  RI S  +    M     P   + Y  ++  L  + + +  + L   +  +G++ 
Sbjct: 373 GLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQA 432

Query: 356 NVHACNELVKGLCKNGRFGSGMKVF 430
           N++  N LV GLCK+GR     KVF
Sbjct: 433 NMYTYNILVDGLCKDGRLTDAQKVF 457


>ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
           gi|300160612|gb|EFJ27229.1| hypothetical protein
           SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
 Frame = +2

Query: 11  AGKLFGFMSGKGYALDAYARNMFVKCLSEKGRFEIVMKVF-----DGCSVEVRDYNYLIS 175
           A +L   M+    A DA+   + V      G+   V         DGC++   +YN++I 
Sbjct: 215 ARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQ 274

Query: 176 GLIRCLRIGSTEEVF-ARMLRLDVPLIDVVYARIVIRLLDAKEFEFVVKLFGFMSSKGVR 352
           G IRC R+    ++F + M +  VP  DV    ++I L  +K+ E  + LF      GV 
Sbjct: 275 GFIRCGRLAEATQLFESTMTKESVP--DVFTYNLLIALCKSKQLEEALTLFQEAEQGGVV 332

Query: 353 LNVHACNELVKGLCKNGRFGSGMKVF 430
           L+V   + L+    K GR    ++VF
Sbjct: 333 LDVFTYSYLMDAFGKAGRAAKALEVF 358