BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00024392
         (768 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN41015.1| unknown [Picea sitchensis]                             130   6e-28
gb|EOY18995.1| Ssu72-like family protein isoform 2 [Theobroma ca...   122   2e-25
gb|EOY18994.1| Ssu72-like family protein isoform 1 [Theobroma ca...   122   2e-25
ref|XP_002322116.1| Ssu72-like family protein [Populus trichocar...   121   2e-25
ref|XP_006421306.1| hypothetical protein CICLE_v10005966mg [Citr...   121   3e-25
ref|XP_006492941.1| PREDICTED: RNA polymerase II subunit A C-ter...   120   4e-25
ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-ter...   120   4e-25
ref|XP_004299504.1| PREDICTED: RNA polymerase II subunit A C-ter...   119   9e-25
ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis] g...   119   1e-24
gb|EMJ10832.1| hypothetical protein PRUPE_ppa011857mg [Prunus pe...   118   2e-24
ref|XP_001761613.1| predicted protein [Physcomitrella patens] gi...   118   2e-24
gb|EPS68457.1| hypothetical protein M569_06312 [Genlisea aurea]       117   3e-24
ref|XP_004513347.1| PREDICTED: RNA polymerase II subunit A C-ter...   117   3e-24
ref|XP_002982740.1| hypothetical protein SELMODRAFT_179725 [Sela...   117   6e-24
ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycin...   116   7e-24
gb|ESW24643.1| hypothetical protein PHAVU_004G147300g [Phaseolus...   115   1e-23
ref|XP_006300550.1| hypothetical protein CARUB_v10020945mg, part...   115   2e-23
ref|XP_006390504.1| hypothetical protein EUTSA_v10019100mg [Eutr...   115   2e-23
ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arab...   115   2e-23
ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana] gi|12...   114   3e-23

>gb|ACN41015.1| unknown [Picea sitchensis]
          Length = 193

 Score =  130 bits (326), Expect = 6e-28
 Identities = 61/73 (83%), Positives = 65/73 (89%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+LRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGA VKLPGPSI +PNVY+FGT Y  
Sbjct: 1   MKLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGAHVKLPGPSIREPNVYDFGTPYRR 60

Query: 418 ILDDLKRKVPNLY 456
           + DDLKRK P LY
Sbjct: 61  MFDDLKRKDPELY 73


>gb|EOY18995.1| Ssu72-like family protein isoform 2 [Theobroma cacao]
          Length = 158

 Score =  122 bits (305), Expect = 2e-25
 Identities = 56/73 (76%), Positives = 65/73 (89%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH+LLKK GFDVSSYGTGA VKLPGPS+ +PNVYEFGT Y+ 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH 60

Query: 418 ILDDLKRKVPNLY 456
           +LDDL+RK P LY
Sbjct: 61  MLDDLRRKDPELY 73


>gb|EOY18994.1| Ssu72-like family protein isoform 1 [Theobroma cacao]
          Length = 193

 Score =  122 bits (305), Expect = 2e-25
 Identities = 56/73 (76%), Positives = 65/73 (89%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH+LLKK GFDVSSYGTGA VKLPGPS+ +PNVYEFGT Y+ 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH 60

Query: 418 ILDDLKRKVPNLY 456
           +LDDL+RK P LY
Sbjct: 61  MLDDLRRKDPELY 73


>ref|XP_002322116.1| Ssu72-like family protein [Populus trichocarpa]
           gi|222869112|gb|EEF06243.1| Ssu72-like family protein
           [Populus trichocarpa]
          Length = 193

 Score =  121 bits (304), Expect = 2e-25
 Identities = 54/73 (73%), Positives = 65/73 (89%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH+LLK+HGFDVSSYGTGA VKLPGPS+ +PNVY+FGT Y+ 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 418 ILDDLKRKVPNLY 456
           + DDL+RK P LY
Sbjct: 61  MFDDLRRKDPELY 73


>ref|XP_006421306.1| hypothetical protein CICLE_v10005966mg [Citrus clementina]
           gi|557523179|gb|ESR34546.1| hypothetical protein
           CICLE_v10005966mg [Citrus clementina]
          Length = 193

 Score =  121 bits (303), Expect = 3e-25
 Identities = 55/73 (75%), Positives = 64/73 (87%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH LLK+HGFDVSSYGTGA VKLPGPS+ +PNVYEFGT Y+ 
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60

Query: 418 ILDDLKRKVPNLY 456
           + DDL+RK P LY
Sbjct: 61  MFDDLRRKDPELY 73


>ref|XP_006492941.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72-like isoform X1 [Citrus sinensis]
           gi|568880029|ref|XP_006492942.1| PREDICTED: RNA
           polymerase II subunit A C-terminal domain phosphatase
           SSU72-like isoform X2 [Citrus sinensis]
          Length = 193

 Score =  120 bits (302), Expect = 4e-25
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH LLK+HGFD+SSYGTGA VKLPGPS+ +PNVYEFGT Y+ 
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHYLLKRHGFDISSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60

Query: 418 ILDDLKRKVPNLY 456
           + DDL+RK P LY
Sbjct: 61  MFDDLRRKDPELY 73


>ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72 [Vitis vinifera]
           gi|296083946|emb|CBI24334.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  120 bits (302), Expect = 4e-25
 Identities = 55/73 (75%), Positives = 65/73 (89%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH+LLKK GFDVSSYGTGA VKLPGPS+ +PNVYEFGT Y+ 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH 60

Query: 418 ILDDLKRKVPNLY 456
           + DDL+RK P+LY
Sbjct: 61  MFDDLRRKDPDLY 73


>ref|XP_004299504.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72-like [Fragaria vesca subsp. vesca]
          Length = 193

 Score =  119 bits (299), Expect = 9e-25
 Identities = 54/73 (73%), Positives = 65/73 (89%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAHALLK+ GFDVSSYGTG+ VKLPGPS+ +PNVYEFGT Y+ 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHALLKRQGFDVSSYGTGSHVKLPGPSLREPNVYEFGTPYKQ 60

Query: 418 ILDDLKRKVPNLY 456
           +LD+L+RK P LY
Sbjct: 61  MLDELRRKDPELY 73


>ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis]
           gi|223545267|gb|EEF46774.1| Protein SSU72, putative
           [Ricinus communis]
          Length = 193

 Score =  119 bits (298), Expect = 1e-24
 Identities = 54/73 (73%), Positives = 65/73 (89%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+LR+AMVC+SNQNRSMEAH+LLK  GFDVSSYGTGA VKLPGPS+ +PNVY+FGT Y+ 
Sbjct: 1   MKLRYAMVCSSNQNRSMEAHSLLKMQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 418 ILDDLKRKVPNLY 456
           + DDL+RK P+LY
Sbjct: 61  MFDDLRRKDPDLY 73


>gb|EMJ10832.1| hypothetical protein PRUPE_ppa011857mg [Prunus persica]
          Length = 193

 Score =  118 bits (296), Expect = 2e-24
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH+LLK+ GFDVSSYGTGA VKLPGPS+ +PNVY+FGT Y+ 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 418 ILDDLKRKVPNLY 456
           + DDL+RK P LY
Sbjct: 61  MFDDLRRKDPELY 73


>ref|XP_001761613.1| predicted protein [Physcomitrella patens]
           gi|162687297|gb|EDQ73681.1| predicted protein
           [Physcomitrella patens]
          Length = 193

 Score =  118 bits (296), Expect = 2e-24
 Identities = 56/73 (76%), Positives = 62/73 (84%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+LRHAMVCASNQNRSMEAHALL++ G DVSSYGTG+ VKLPGPSI +PNVY FGT Y S
Sbjct: 1   MKLRHAMVCASNQNRSMEAHALLQRQGLDVSSYGTGSHVKLPGPSIREPNVYAFGTPYRS 60

Query: 418 ILDDLKRKVPNLY 456
           IL+DL  K P LY
Sbjct: 61  ILEDLTNKNPELY 73


>gb|EPS68457.1| hypothetical protein M569_06312 [Genlisea aurea]
          Length = 193

 Score =  117 bits (294), Expect = 3e-24
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+LR+AMVC+SNQNRSMEAH+LLKK GFDV+SYGTG  VKLPGPS+ +PNVY+FGT Y+ 
Sbjct: 1   MKLRYAMVCSSNQNRSMEAHSLLKKEGFDVASYGTGQHVKLPGPSLREPNVYDFGTPYKH 60

Query: 418 ILDDLKRKVPNLY 456
           +L+DL+RK P LY
Sbjct: 61  MLEDLRRKDPELY 73


>ref|XP_004513347.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72-like [Cicer arietinum]
          Length = 193

 Score =  117 bits (294), Expect = 3e-24
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH+L K+ GFDVSSYGTGA VKLPGPS+ +PNVYEFGT Y+ 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLFKRQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH 60

Query: 418 ILDDLKRKVPNLY 456
           +LD+L+RK P LY
Sbjct: 61  MLDELRRKDPELY 73


>ref|XP_002982740.1| hypothetical protein SELMODRAFT_179725 [Selaginella moellendorffii]
           gi|302818428|ref|XP_002990887.1| hypothetical protein
           SELMODRAFT_185661 [Selaginella moellendorffii]
           gi|300141218|gb|EFJ07931.1| hypothetical protein
           SELMODRAFT_185661 [Selaginella moellendorffii]
           gi|300149330|gb|EFJ15985.1| hypothetical protein
           SELMODRAFT_179725 [Selaginella moellendorffii]
          Length = 194

 Score =  117 bits (292), Expect = 6e-24
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+LRHAMVCASNQNRSMEAHALL++ G DVSSYGTG +VKLPGP+I  PN+Y+FGT Y +
Sbjct: 1   MKLRHAMVCASNQNRSMEAHALLQREGLDVSSYGTGNQVKLPGPTIRDPNIYQFGTPYTA 60

Query: 418 ILDDLKRKVPNLY 456
           I++DLK K P+LY
Sbjct: 61  IIEDLKNKDPDLY 73


>ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycine max]
           gi|255628381|gb|ACU14535.1| unknown [Glycine max]
          Length = 193

 Score =  116 bits (291), Expect = 7e-24
 Identities = 52/73 (71%), Positives = 65/73 (89%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH LLK+ GFDVSSYGTGA VKLPGPS+ +PNVY+FGT Y+ 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHFLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 418 ILDDLKRKVPNLY 456
           +++DL+RK P+LY
Sbjct: 61  MIEDLRRKDPDLY 73


>gb|ESW24643.1| hypothetical protein PHAVU_004G147300g [Phaseolus vulgaris]
          Length = 193

 Score =  115 bits (289), Expect = 1e-23
 Identities = 53/73 (72%), Positives = 64/73 (87%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           M+ R+AMVC+SNQNRSMEAH+LLK+ GFDVSSYGTGA VKLPGPS+ +PNVYEFGT Y+ 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKREGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKY 60

Query: 418 ILDDLKRKVPNLY 456
           + DDL+RK  +LY
Sbjct: 61  MYDDLRRKDTDLY 73


>ref|XP_006300550.1| hypothetical protein CARUB_v10020945mg, partial [Capsella rubella]
           gi|482569260|gb|EOA33448.1| hypothetical protein
           CARUB_v10020945mg, partial [Capsella rubella]
          Length = 212

 Score =  115 bits (288), Expect = 2e-23
 Identities = 51/75 (68%), Positives = 64/75 (85%)
 Frame = +1

Query: 232 VKMRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSY 411
           + MR R+AMVC+SNQNRSMEAHALLK+ G DV+SYGTG+ VKLPGPS+ +PNVY+FGT Y
Sbjct: 18  IAMRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSLREPNVYDFGTPY 77

Query: 412 ESILDDLKRKVPNLY 456
           + + D+L+RK P LY
Sbjct: 78  KKMFDELRRKDPELY 92


>ref|XP_006390504.1| hypothetical protein EUTSA_v10019100mg [Eutrema salsugineum]
           gi|557086938|gb|ESQ27790.1| hypothetical protein
           EUTSA_v10019100mg [Eutrema salsugineum]
          Length = 225

 Score =  115 bits (287), Expect = 2e-23
 Identities = 51/73 (69%), Positives = 63/73 (86%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           MR R+AMVC+SNQNRSMEAHALLK+ G DV+SYGTG+ VKLPGPS+ +PNVY+FGT Y+ 
Sbjct: 33  MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSVREPNVYDFGTPYKQ 92

Query: 418 ILDDLKRKVPNLY 456
           + D+L+RK P LY
Sbjct: 93  MFDELRRKDPELY 105


>ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp.
           lyrata] gi|297334789|gb|EFH65207.1| hypothetical protein
           ARALYDRAFT_895246 [Arabidopsis lyrata subsp. lyrata]
          Length = 193

 Score =  115 bits (287), Expect = 2e-23
 Identities = 51/73 (69%), Positives = 63/73 (86%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           MR R+AMVC+SNQNRSMEAHALLK+ G DV+SYGTG+ VKLPGPS+ +PNVY+FGT Y+ 
Sbjct: 1   MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSVREPNVYDFGTPYKQ 60

Query: 418 ILDDLKRKVPNLY 456
           + D+L+RK P LY
Sbjct: 61  MFDELRRKDPELY 73


>ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana]
           gi|12324205|gb|AAG52071.1|AC012679_9 unknown protein;
           85102-83684 [Arabidopsis thaliana]
           gi|26453040|dbj|BAC43596.1| unknown protein [Arabidopsis
           thaliana] gi|28973307|gb|AAO63978.1| unknown protein
           [Arabidopsis thaliana] gi|332197391|gb|AEE35512.1|
           Ssu72-like protein [Arabidopsis thaliana]
          Length = 193

 Score =  114 bits (286), Expect = 3e-23
 Identities = 51/73 (69%), Positives = 63/73 (86%)
 Frame = +1

Query: 238 MRLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGARVKLPGPSISKPNVYEFGTSYES 417
           MR R+AMVC+SNQNRSMEAHALLK+ G DV+SYGTG+ VKLPGPS+ +PNVY+FGT Y+ 
Sbjct: 1   MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 418 ILDDLKRKVPNLY 456
           + D+L+RK P LY
Sbjct: 61  MFDELRRKDPELY 73