BLASTX nr result

ID: Ephedra27_contig00024369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00024369
         (1141 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002970424.1| hypothetical protein SELMODRAFT_410981 [Sela...   133   1e-28
ref|XP_001758254.1| predicted protein [Physcomitrella patens] gi...    96   4e-17
ref|XP_002468737.1| predicted protein [Postia placenta Mad-698-R...    60   2e-06
ref|XP_006374031.1| hypothetical protein POPTR_0016s13570g [Popu...    58   8e-06

>ref|XP_002970424.1| hypothetical protein SELMODRAFT_410981 [Selaginella moellendorffii]
           gi|300161940|gb|EFJ28554.1| hypothetical protein
           SELMODRAFT_410981 [Selaginella moellendorffii]
          Length = 589

 Score =  133 bits (335), Expect = 1e-28
 Identities = 88/237 (37%), Positives = 125/237 (52%), Gaps = 16/237 (6%)
 Frame = +1

Query: 1   DSNKEQAHRRIIVYLKVENHT-LTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKIL 177
           D+N EQAHRR++V + V  H    ++VQ  D V  +  IVE+  GIP W QRI FSG  L
Sbjct: 258 DTNNEQAHRRMLVTVNVLGHEEFRLIVQGRDRVQDVTNIVEARTGIPQWQQRISFSGNTL 317

Query: 178 QDKMTLADYFIYPECTVEVKARKNSVKTSLM-------------EESAPTPAARKLNVTR 318
           QDK TLA+YF+ P+ T++V A K+ +K+S               ++ + TPAARKL + R
Sbjct: 318 QDKKTLAEYFVCPQSTLQVAAFKSPLKSSFKAGKLFHAASENRDDDPSYTPAARKLKMVR 377

Query: 319 THGGRNLGTITIPILTTDKLTDLKRKMKISLHPQGGRN--VGTAPFRANIDNHIQNNIPP 492
           T  G   GTITIP+LT+D + DL+RK+K SL P    N  +GT P  ++   +      P
Sbjct: 378 TCKGVVAGTITIPVLTSDTVGDLRRKVKRSLRPLEETNFSIGTPPRNSSASVNCLTGPSP 437

Query: 493 LQDLTEQMQKIQRASSVKERLPISTPITAATLRSPSHNVETAKYFTPQETTECFLTP 663
           L        K + A+S  +  P     T     +P   +      +PQ    C++TP
Sbjct: 438 L--------KPRPANSAHKLPPPPLADTPERFETPRARLPA----SPQTPQSCYVTP 482


>ref|XP_001758254.1| predicted protein [Physcomitrella patens]
           gi|162690710|gb|EDQ77076.1| predicted protein
           [Physcomitrella patens]
          Length = 701

 Score = 95.5 bits (236), Expect = 4e-17
 Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 13/162 (8%)
 Frame = +1

Query: 1   DSNKEQAHRRIIVYLKVENHT-LTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKIL 177
           D   E+ HRR++V++ V      ++ V   D V S+++ VES +GI    Q+I +SGK+L
Sbjct: 317 DKYTEKMHRRMVVHVNVVGEEEFSITVHGRDTVLSILKCVESRIGIVPSQQKISYSGKLL 376

Query: 178 QDKMTLADYFIYPECTVEV---KARKNSVKTSL---------MEESAPTPAARKLNVTRT 321
           Q+K TL  Y I P+  + V   K   N  K S           E S   P A KL + RT
Sbjct: 377 QEKKTLGSYLIEPDSVLTVTMSKCAGNLAKKSTSCDNKEDLPKEGSGQKPNATKLKLMRT 436

Query: 322 HGGRNLGTITIPILTTDKLTDLKRKMKISLHPQGGRNVGTAP 447
             G+  GT+TIP++++D + DL+RK+K +L P    N+  AP
Sbjct: 437 SKGQVKGTLTIPVISSDTVADLQRKLKRTLAPLVEHNLSEAP 478


>ref|XP_002468737.1| predicted protein [Postia placenta Mad-698-R]
           gi|220732122|gb|EED85960.1| predicted protein [Postia
           placenta Mad-698-R]
          Length = 289

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 39/138 (28%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
 Frame = +1

Query: 37  VYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLADYFIY 213
           +Y++ V + ++ V +   + V  L Q +E  LGIP+ +QR++FSG+ L+D+ +LADY + 
Sbjct: 115 IYIRTVGDQSIAVTLSMDEKVLVLKQQIEEKLGIPADDQRLLFSGQELEDQRSLADYELQ 174

Query: 214 PECTVEVK-----ARKNSVKTSLMEESAPTPAARKLNV-TRTHGGRNLGTITIPILTTDK 375
            + TV +      AR+ S +T+L     P P+  ++ +  +   G+ +  +  P  T   
Sbjct: 175 TDNTVHLSTRSTPARQGSARTTLQRLRRPAPSNEEVQIFVKNLNGKTMAIMVSPADTVKS 234

Query: 376 LTDLKRKMKISLHPQGGR 429
           L + K ++K  + P   R
Sbjct: 235 LLE-KVEVKTGIPPSQQR 251


>ref|XP_006374031.1| hypothetical protein POPTR_0016s13570g [Populus trichocarpa]
           gi|550321441|gb|ERP51828.1| hypothetical protein
           POPTR_0016s13570g [Populus trichocarpa]
          Length = 123

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = +1

Query: 37  VYLKVENH-TLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLADYFIY 213
           +++KV +  TLT+ V PSD ++ +   +E+  G+P   QR++F+GK+L+D  TLADY I 
Sbjct: 3   IFVKVPSEKTLTLDVLPSDTISIVKTKIETKEGVPLDRQRLIFAGKLLEDNETLADYKIQ 62

Query: 214 PECTVEVKAR 243
            ECT+ +  R
Sbjct: 63  KECTLHLMLR 72


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