BLASTX nr result

ID: Ephedra27_contig00024348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00024348
         (466 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18309.1| unknown [Picea sitchensis]                              56   4e-06

>gb|ABR18309.1| unknown [Picea sitchensis]
          Length = 365

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   GNGVFWIAQLGIRNWFWRLCYSKRYTRQIVGALWRVMP-SVGSYVFSEAGVVSANVDGKV 177
           GNG FWIA    R   W +       R ++  + R+ P +V   + +E  V++ N  G  
Sbjct: 264 GNGTFWIALATSRTLSWTIATKFPSVRHVLALIARLAPGAVIDAIVNEPSVLAVNEMGNP 323

Query: 178 IEFYSSGTPNNGISMITGATRYGDSLFFGSLHLDFIGRVHLEKE 309
           I  Y+    +N    I    + GDSL++GSL  D+IG V L +E
Sbjct: 324 IALYADPNLSN---QINSGLKMGDSLYYGSLTADYIGHVPLTEE 364


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