BLASTX nr result
ID: Ephedra27_contig00024313
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00024313
(880 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006828912.1| hypothetical protein AMTR_s00001p00203780 [A... 114 6e-23
gb|EMJ18605.1| hypothetical protein PRUPE_ppa024153mg [Prunus pe... 113 8e-23
gb|EOY03042.1| Pentatricopeptide repeat superfamily protein [The... 110 5e-22
ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat... 105 2e-20
emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera] 105 2e-20
ref|XP_006482079.1| PREDICTED: putative pentatricopeptide repeat... 103 8e-20
ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat... 101 4e-19
ref|XP_006430553.1| hypothetical protein CICLE_v10011347mg [Citr... 100 5e-19
ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat... 100 7e-19
gb|EXB95905.1| hypothetical protein L484_004954 [Morus notabilis] 97 1e-17
ref|XP_003616261.1| Pentatricopeptide repeat-containing protein ... 95 3e-17
ref|XP_004490829.1| PREDICTED: putative pentatricopeptide repeat... 94 9e-17
ref|XP_004243565.1| PREDICTED: pentatricopeptide repeat-containi... 93 1e-16
ref|XP_006372553.1| pentatricopeptide repeat-containing family p... 92 3e-16
ref|XP_002302938.1| predicted protein [Populus trichocarpa] 92 3e-16
ref|XP_006447772.1| hypothetical protein CICLE_v10018243mg [Citr... 90 1e-15
gb|ESW13920.1| hypothetical protein PHAVU_008G237700g [Phaseolus... 89 2e-15
ref|XP_006469492.1| PREDICTED: pentatricopeptide repeat-containi... 88 4e-15
ref|NP_172439.1| pentatricopeptide repeat-containing protein [Ar... 88 4e-15
ref|XP_004250536.1| PREDICTED: putative pentatricopeptide repeat... 84 4e-15
>ref|XP_006828912.1| hypothetical protein AMTR_s00001p00203780 [Amborella trichopoda]
gi|548833891|gb|ERM96328.1| hypothetical protein
AMTR_s00001p00203780 [Amborella trichopoda]
Length = 583
Score = 114 bits (284), Expect = 6e-23
Identities = 70/201 (34%), Positives = 112/201 (55%), Gaps = 11/201 (5%)
Frame = +2
Query: 308 NSLKKYAMYLTADHMVHIIRTAKLK-PAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCNA 484
+SL+K LTA+H+VH+I + + P + SFF W+ ++ FRH+ SY AM H L
Sbjct: 41 SSLRKLVPNLTANHVVHLIFSHPSQDPPSLLSFFKWVAAQKGFRHTIQSYCAMTHFLSLH 100
Query: 485 KMYSEAENLMLCLVRRKPPDLLIEV---LLQTQIPGKPL-CH------LVYNMMLVCYGR 634
+M EA +L+ +V RK D V LL+TQ G+ + CH + +++ Y
Sbjct: 101 RMVPEALSLLKTVVSRKGRDSASSVFNALLETQ--GEDVQCHDQRSRSTSFELLMNVYID 158
Query: 635 CGKLQSSIDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYT 814
G + +I C RL + +G ++C+YL+ +++SN A FY ++ + G P VYT
Sbjct: 159 SGFISDAIQCLRLVKKHGFKLPFQACNYLMDCIMKSNTPAAAWAFYSEILDYGFPPNVYT 218
Query: 815 FNMIIQCLLRIGKVSDARQVF 877
FNMI+ RIGK+ +A+ +F
Sbjct: 219 FNMIMHSFSRIGKIKEAQLLF 239
>gb|EMJ18605.1| hypothetical protein PRUPE_ppa024153mg [Prunus persica]
Length = 605
Score = 113 bits (283), Expect = 8e-23
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Frame = +2
Query: 200 TNTTIPWLKE-----EQDVKLVERVVSKMVAECNPNTAMDWNSLKKYAMYLTADHMVHII 364
T TT W + +D KL +S + N+ +SL+K LTA ++++I
Sbjct: 30 TATTTAWYNQPPTPHNEDPKL--SAISDAIKTTTQNSQPLDSSLRKLLPSLTARDVINLI 87
Query: 365 RTA--KLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCNAKMYSEAENLMLCLVRRKP 538
L P + SFFNWL FRH+ SY M H LC +MY +A++L+ +V RK
Sbjct: 88 NLNPHSLSPLSLLSFFNWLSSHPTFRHNIQSYCTMAHFLCAHQMYPQAQSLLRIVVSRKG 147
Query: 539 PDLLIEV---LLQTQIPGKPLCHLVYNMMLVCYGRCGKLQSSIDCFRLFRTNGIMTSVKS 709
+ V +L+T+ G + V++ ++ Y CG + + CFRL R + +
Sbjct: 148 KETASSVFASILETR--GTHQSNYVFDALMNAYVDCGFVSDACQCFRLLRKHNFRIPFHA 205
Query: 710 CHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQCLLRIGKVSDARQVFD 880
C L+ +++ N A GFY ++ ++G P+VY FN+++ L + G++ +A+ VFD
Sbjct: 206 CGCLLDKMLKLNSPVVAWGFYLEILDSGFPPKVYNFNVLMHKLCKEGEIREAQLVFD 262
>gb|EOY03042.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 658
Score = 110 bits (276), Expect = 5e-22
Identities = 63/195 (32%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Frame = +2
Query: 311 SLKKYAMYLTADHMVHII--RTAKLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCNA 484
SLKK LT H++++I L P + SFFN+L FRH+ SYS M H L
Sbjct: 65 SLKKLLPSLTPSHVINLITLNPHSLSPLSLLSFFNFLSSHPPFRHTLRSYSTMAHFLIAH 124
Query: 485 KMYSEAENLMLCLVRRK---PPDLLIEVLLQTQIPGKPLCHLVYNMMLVCYGRCGKLQSS 655
KM+ +A++L+ LV RK L+ +++T+ G C V++ +++ Y G + +
Sbjct: 125 KMFHQAQSLLHFLVSRKGKGSASLVFTSIIETK--GTHQCGFVFDSLMIAYKDLGFVPDA 182
Query: 656 IDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQC 835
I CFRL R + + C YL+ +++ + ++GFY ++ + G P VY FN+++
Sbjct: 183 IQCFRLVRKHKFKLPFQGCKYLLDRMMKISSPMVSLGFYLEILDYGFSPSVYNFNILMHK 242
Query: 836 LLRIGKVSDARQVFD 880
L R+ ++ DA+ VF+
Sbjct: 243 LCRVSQIKDAQMVFN 257
>ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera] gi|296087085|emb|CBI33459.3|
unnamed protein product [Vitis vinifera]
Length = 592
Score = 105 bits (263), Expect = 2e-20
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Frame = +2
Query: 308 NSLKKYAMYLTADHMVHIIRTA--KLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCN 481
+SLK+ LT +H++ +I L P + SFF WL + FR S SY M H LC
Sbjct: 56 SSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCT 115
Query: 482 AKMYSEAENLMLCLVRRKPPDLLIEVLLQT-QIPGKPLCHLVYNMMLVCYGRCGKLQSSI 658
KM SEA++L+ +V RK + V + G +LV+++++ Y G +I
Sbjct: 116 HKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAI 175
Query: 659 DCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQCL 838
CFRL R + + SC YL L++ NL A FY+++ + G P V FN+++ L
Sbjct: 176 QCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRL 235
Query: 839 LRIGKVSDARQVF 877
+ K+++A+ +F
Sbjct: 236 CKEHKINEAQLLF 248
>emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 105 bits (263), Expect = 2e-20
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Frame = +2
Query: 308 NSLKKYAMYLTADHMVHIIRTA--KLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCN 481
+SLK+ LT +H++ +I L P + SFF WL + FR S SY M H LC
Sbjct: 56 SSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCT 115
Query: 482 AKMYSEAENLMLCLVRRKPPDLLIEVLLQT-QIPGKPLCHLVYNMMLVCYGRCGKLQSSI 658
KM SEA++L+ +V RK + V + G +LV+++++ Y G +I
Sbjct: 116 HKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAI 175
Query: 659 DCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQCL 838
CFRL R + + SC YL L++ NL A FY+++ + G P V FN+++ L
Sbjct: 176 QCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRL 235
Query: 839 LRIGKVSDARQVF 877
+ K+++A+ +F
Sbjct: 236 CKEHKINEAQLLF 248
>ref|XP_006482079.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Citrus sinensis]
Length = 586
Score = 103 bits (257), Expect = 8e-20
Identities = 62/196 (31%), Positives = 107/196 (54%), Gaps = 5/196 (2%)
Frame = +2
Query: 308 NSLKKYAMYLTADHMVHII--RTAKLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCN 481
+SL K+ +++ + ++I L P + SFFN+L + FR + +YS M+H L
Sbjct: 53 SSLTKFLPSISSLQVTNLITRNPHSLPPHSLLSFFNFLSSQPHFRLTLHAYSTMVHFLAA 112
Query: 482 AKMYSEAENLMLCLVRRK---PPDLLIEVLLQTQIPGKPLCHLVYNMMLVCYGRCGKLQS 652
KM+S+A +L+ +V +K L +L+T+ G L LV + +++ Y G L
Sbjct: 113 HKMHSQARDLLHLIVSKKGMGSSASLFASILETR--GTHLPGLVLDALMIVYVDLGFLDD 170
Query: 653 SIDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQ 832
+I CFRL R + + C L+ ++++NL +GFY ++ + G P VY FN+++
Sbjct: 171 AIQCFRLLRKHNFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMH 230
Query: 833 CLLRIGKVSDARQVFD 880
L + GK+ DA+ VFD
Sbjct: 231 KLCKEGKIKDAQMVFD 246
>ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 101 bits (251), Expect = 4e-19
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 9/246 (3%)
Frame = +2
Query: 170 PNDTMQTH-----KPTNTTIPWLKEEQDVKLVERVVSKM-VAECNPNTAMDWNSLKKYAM 331
PN++ H KP+ W L + V++ + A N T +SL++
Sbjct: 2 PNNSSFKHSISLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSLRRLLP 61
Query: 332 YLTADHMVHIIRTA--KLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCNAKMYSEAE 505
H + +I L P+ +FSFFNWL FRH+ SY AM + L +M+ E +
Sbjct: 62 SFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQ 121
Query: 506 NLMLCLVRRKPPDLLIEVLLQT-QIPGKPLCHLVYNMMLVCYGRCGKLQSSIDCFRLFRT 682
+++ LV RK D V G + V++ +++ Y G + +I CFRL R
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181
Query: 683 NGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQCLLRIGKVSD 862
+ C YL+ +I SN FY ++ E G P+V +N++I + G + D
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241
Query: 863 ARQVFD 880
A+ +F+
Sbjct: 242 AKLIFN 247
>ref|XP_006430553.1| hypothetical protein CICLE_v10011347mg [Citrus clementina]
gi|557532610|gb|ESR43793.1| hypothetical protein
CICLE_v10011347mg [Citrus clementina]
Length = 586
Score = 100 bits (250), Expect = 5e-19
Identities = 62/196 (31%), Positives = 107/196 (54%), Gaps = 5/196 (2%)
Frame = +2
Query: 308 NSLKKYAMYLTADHMVHII--RTAKLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCN 481
+SL K+ +++ + ++I L P + SFFN+L + FR + +YS M+H L
Sbjct: 53 SSLTKFLPSISSLQVTNLITRNPHSLPPHSLLSFFNFLSSQPHFRLTLHAYSTMVHFLVA 112
Query: 482 AKMYSEAENLMLCLVRRK---PPDLLIEVLLQTQIPGKPLCHLVYNMMLVCYGRCGKLQS 652
KM+S+A +L+ +V +K L +L+T+ G L LV + +++ Y G L
Sbjct: 113 HKMHSQARDLLHLIVSKKGMGSSASLFASILETR--GTHLPGLVLDALMIVYVDLGFLDD 170
Query: 653 SIDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQ 832
+I CFRL R + + C L+ ++++NL +GFY ++ + G P VY FN+++
Sbjct: 171 AIQCFRLLRKHYFRIPARGCRCLIDRMMRTNLPTVTLGFYLEILDYGYSPSVYVFNVLMH 230
Query: 833 CLLRIGKVSDARQVFD 880
L + GK+ DA+ VFD
Sbjct: 231 KLCKEGKIKDAQIVFD 246
>ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 100 bits (249), Expect = 7e-19
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 9/246 (3%)
Frame = +2
Query: 170 PNDTMQTH-----KPTNTTIPWLKEEQDVKLVERVVSKM-VAECNPNTAMDWNSLKKYAM 331
PN++ H KP+ W L + V++ + A N T +SL++
Sbjct: 2 PNNSSFKHSISLSKPSFLYSTWHSPPPLAALADPVLAAVSTAINNAQTKPLASSLRRLLP 61
Query: 332 YLTADHMVHIIRTA--KLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCNAKMYSEAE 505
H + +I L P+ +FSFFNWL FRH+ SY AM + L +M+ E +
Sbjct: 62 SFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQ 121
Query: 506 NLMLCLVRRKPPDLLIEVLLQT-QIPGKPLCHLVYNMMLVCYGRCGKLQSSIDCFRLFRT 682
+++ LV RK D V G + V++ +++ Y G + +I CFRL R
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181
Query: 683 NGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQCLLRIGKVSD 862
+ C YL+ +I SN FY ++ E G P+V +N++I + G + D
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241
Query: 863 ARQVFD 880
A+ +F+
Sbjct: 242 AKLIFN 247
>gb|EXB95905.1| hypothetical protein L484_004954 [Morus notabilis]
Length = 620
Score = 96.7 bits (239), Expect = 1e-17
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 9/252 (3%)
Frame = +2
Query: 152 ATLPTQPNDTMQTHKPTNTTIPWLKEEQDVKLVERV-VSKMVAECNPNTAMDWNSLKKYA 328
A+L + T H P + P EE V R+ +S +A + T +D +SLK +
Sbjct: 27 ASLSLSSSTTTPWHAPPPSLSPPHYEEDGVDPTLRLSISSAIANSHA-TPLD-SSLKPHL 84
Query: 329 MYLTADHMVHIIRT--AKLKPAIIFSFFNWLEHRR-WFRHSHSSYSAMIHVLCNAKMYSE 499
LT ++ ++ T L P + SFF+WL FRH+ SYSAM H L +M +
Sbjct: 85 SSLTPRLLISLLATNPLSLSPQSLLSFFHWLPSSSPSFRHTPHSYSAMAHFLRAHRMGPD 144
Query: 500 AENLMLCLVRRKPPDLLIEVLLQTQIPGKPL--CHLVYNMMLVCYGRCGKLQSSIDCFRL 673
A++L+ LV RK + + G H +++ +++ Y CG L +I CFRL
Sbjct: 145 AQSLLNFLVSRKGKHSAASLFAAVEATGGRYNNAHPLFDYLIIAYTDCGFLSDAIQCFRL 204
Query: 674 FRTNGIMTS---VKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQCLLR 844
+ S + C YL +++SN F+ ++ + G P+VY FN+++ +
Sbjct: 205 LVRKRNLNSHFPFRGCGYLFDKMLKSNSPWAVWLFFSEILDYGYPPKVYNFNVLMNRFCK 264
Query: 845 IGKVSDARQVFD 880
G++ A+ VFD
Sbjct: 265 EGRIEGAQMVFD 276
>ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 811
Score = 95.1 bits (235), Expect = 3e-17
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 9/208 (4%)
Frame = +2
Query: 284 NPNTAMDWN-SLKKYAMYLTADHMVHIIRT--AKLKPAIIFSFFNWLEHRRWFRHSHSSY 454
NPN N +LK+ LT+ H+ ++I L P +FSFFN+L R FRH+ +Y
Sbjct: 43 NPNPDYSLNPTLKRILPSLTSHHITNLINLNPLSLPPLSLFSFFNYLASRPPFRHTLHNY 102
Query: 455 SAMIHVLCNAKMYSEAENLMLCLVRR---KPPDLLIEVLLQTQIPGKPLCH--LVYNMML 619
S M H L + + S+ +L L ++ + LI L+QT H LV++ ++
Sbjct: 103 STMAHFLSSHNLLSQTHSLFLFIISKMGHHSSTSLISSLIQTVPTHHRHNHSVLVFDALI 162
Query: 620 VCYGRCGKLQSSIDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAE-EAVGFYKKMRENGL 796
+ Y ++ +I C RL + N V C YL+ +++ N FY ++ + G
Sbjct: 163 IAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGY 222
Query: 797 VPRVYTFNMIIQCLLRIGKVSDARQVFD 880
P VY FN+++ +IG V +AR VFD
Sbjct: 223 PPNVYLFNILMHGFCKIGDVMNARMVFD 250
>ref|XP_004490829.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cicer arietinum]
Length = 603
Score = 93.6 bits (231), Expect = 9e-17
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Frame = +2
Query: 140 QSLPATLPTQPNDTMQTHKPTNTTIPWLKEEQDVKLVERVVSKMVAECNPNTAMDWNSLK 319
+++ T+ T N+ T+ T T++P D L NP +LK
Sbjct: 32 EAINNTIQTNNNNNNFTNSQTKTSLP------DYSL------------NP-------TLK 66
Query: 320 KYAMYLTADHMVHIIRT--AKLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCNAKMY 493
+ LT+ H+ ++I L P +FSFFN+L R FRH+ SY+ M H L + M
Sbjct: 67 RIIPSLTSHHITNLINLNPLSLSPQSLFSFFNYLASRPPFRHTLHSYTTMAHFLSSHNML 126
Query: 494 SEAENLMLCLVRRK---PPDLLIEVLLQTQIPG--KPLCHLVYNMMLVCYGRCGKLQSSI 658
S+ +L + +V + L LLQT LV++ ++ Y G ++ +I
Sbjct: 127 SQTHSLFIFVVSKMGHHSSHSLFSSLLQTTPTHYRNQRSFLVFDALITAYTDSGFIEEAI 186
Query: 659 DCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQCL 838
RL + ++ C YL+S +++ FY ++ + G P+VY FN+++
Sbjct: 187 QVLRLMKNKKFQIPLRGCEYLLSHVMKLKQPGPCWEFYLEVLDYGYPPKVYLFNILMHGF 246
Query: 839 LRIGKVSDARQVFD 880
++G V +AR VFD
Sbjct: 247 CKVGDVENARMVFD 260
>ref|XP_004243565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Solanum lycopersicum]
Length = 530
Score = 93.2 bits (230), Expect = 1e-16
Identities = 54/195 (27%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
Frame = +2
Query: 302 DWNSLKKYAMYLTADHMVHIIRTAKLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCN 481
DW L+ + LT + HI+ + + FF W+E + ++ ++S ++HVL
Sbjct: 67 DWTKLENLSSGLTQFRVKHILLKIQKDYVLSLEFFKWVEVKSPNSNTLENHSIVLHVLTK 126
Query: 482 AKMYSEAENLMLCLVRRK----PPDLLIEVLLQTQIPGKPLCHLVYNMMLVCYGRCGKLQ 649
+K + AE+++ L+ P L +LL +I V++ + C+ K +
Sbjct: 127 SKKFKSAESILRKLLESGSVDFPGKLFEAILLSYRICDSS--PRVFDSLFKCHAHLKKFR 184
Query: 650 SSIDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMII 829
++ D F + G + +V+SC+ +S L+ S+ + A+ FYK+MR + + P VYTFNM++
Sbjct: 185 NASDTFCSMKQYGFVPTVESCNAFMSALLSSDRVDVALAFYKEMRRSKISPNVYTFNMVV 244
Query: 830 QCLLRIGKVSDARQV 874
L + GK+ A +V
Sbjct: 245 SALCKSGKLEKAVEV 259
>ref|XP_006372553.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550319182|gb|ERP50350.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 599
Score = 92.0 bits (227), Expect = 3e-16
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Frame = +2
Query: 311 SLKKYAMYLTADHMVHIIRTAK--LKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCNA 484
SLK A H + ++ L P + SFF++L F H+ SY +M+H L
Sbjct: 64 SLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAH 123
Query: 485 KMYSEAENLMLCLVRRKPPDLLIEV---LLQTQIPGKPLCHLVYNMMLVCYGRCGKLQSS 655
+M +AE+L+ +V RK V +L+T+ G V++ ++ Y G + +
Sbjct: 124 RMNQQAESLLHFVVSRKGKGSASSVFASILETK--GTLSSSFVFDALMSVYTEFGYVSDA 181
Query: 656 IDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQC 835
I CFRL + + + C L+ +I+ + A+ FY ++ ++G P VYTFN+++
Sbjct: 182 IQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNR 241
Query: 836 LLRIGKVSDARQVFD 880
L + GKV DA+ +FD
Sbjct: 242 LCKEGKVKDAQLIFD 256
>ref|XP_002302938.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 92.0 bits (227), Expect = 3e-16
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Frame = +2
Query: 311 SLKKYAMYLTADHMVHIIRTAK--LKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCNA 484
SLK A H + ++ L P + SFF++L F H+ SY +M+H L
Sbjct: 64 SLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAH 123
Query: 485 KMYSEAENLMLCLVRRKPPDLLIEV---LLQTQIPGKPLCHLVYNMMLVCYGRCGKLQSS 655
+M +AE+L+ +V RK V +L+T+ G V++ ++ Y G + +
Sbjct: 124 RMNQQAESLLHFVVSRKGKGSASSVFASILETK--GTLSSSFVFDALMSVYTEFGYVSDA 181
Query: 656 IDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQC 835
I CFRL + + + C L+ +I+ + A+ FY ++ ++G P VYTFN+++
Sbjct: 182 IQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNR 241
Query: 836 LLRIGKVSDARQVFD 880
L + GKV DA+ +FD
Sbjct: 242 LCKEGKVKDAQLIFD 256
>ref|XP_006447772.1| hypothetical protein CICLE_v10018243mg [Citrus clementina]
gi|557550383|gb|ESR61012.1| hypothetical protein
CICLE_v10018243mg [Citrus clementina]
Length = 565
Score = 90.1 bits (222), Expect = 1e-15
Identities = 48/195 (24%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Frame = +2
Query: 302 DWNSLKKYAMYLTADHMVHIIRTAKLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCN 481
DW L + +LT + H++ + + FF W++ + + ++S ++H+L
Sbjct: 93 DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTK 152
Query: 482 AKMYSEAENLMLCLVRRKPPDLLIEVLLQTQIPGKPLCH---LVYNMMLVCYGRCGKLQS 652
+ + +E+++ ++ DL + L + + +C LV++++ Y K ++
Sbjct: 153 NRKFKSSESILRGILDSDSFDLPSK-LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
Query: 653 SIDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQ 832
+ D F R G + ++SC+ +S L+ S + A+GFYK+MR N + P VYT NM++
Sbjct: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
Query: 833 CLLRIGKVSDARQVF 877
++G + A +VF
Sbjct: 272 AFCKLGNIESAVEVF 286
>gb|ESW13920.1| hypothetical protein PHAVU_008G237700g [Phaseolus vulgaris]
Length = 609
Score = 89.4 bits (220), Expect = 2e-15
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Frame = +2
Query: 314 LKKYAMYLTADHMVHII--RTAKLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCNAK 487
L++ LT H+ ++I L P+ + SFFN+L R +RH+ SY M+H L +
Sbjct: 71 LRRILPSLTTRHVTNLITLNPLSLSPSSLLSFFNYLASRPPYRHTLHSYCTMLHFLYLHR 130
Query: 488 MYSEAENLMLCLVRRK---PPDLLIEVLLQTQIPGKPLCHLVYNMMLVCYGRCGKLQSSI 658
M +A +L+ +V RK L +L+T +V++ ++ Y G + ++
Sbjct: 131 MLPQAHSLLSFIVSRKGSNSASSLFSSILRTLPSRHHSAGIVFDALICAYVDSGFIPDAV 190
Query: 659 DCFRLFRTNGIMTSVKSCHYLVSWLIQSN--LAEEAVGFYKKMRENGLVPRVYTFNMIIQ 832
CFRL N V++C L+ +++ E + Y ++ ++G PR+Y FN+++
Sbjct: 191 QCFRLVTKNKFPVPVRACDNLLRHVVRLKPLEVERSWALYLEVLDSGYPPRIYFFNVLMH 250
Query: 833 CLLRIGKVSDARQVFD 880
++G V +AR VFD
Sbjct: 251 GFCKVGDVGNARLVFD 266
>ref|XP_006469492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568830409|ref|XP_006469493.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|568830411|ref|XP_006469494.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform X3 [Citrus sinensis]
Length = 565
Score = 88.2 bits (217), Expect = 4e-15
Identities = 48/195 (24%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Frame = +2
Query: 302 DWNSLKKYAMYLTADHMVHIIRTAKLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVLCN 481
DW L + +LT + H++ + + FF W++ + + ++S ++H+L
Sbjct: 93 DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTK 152
Query: 482 AKMYSEAENLMLCLVRRKPPDLLIEVLLQTQIPGKPLCH---LVYNMMLVCYGRCGKLQS 652
+ + +E+++ ++ DL + L + + +C LV++++ Y K ++
Sbjct: 153 NRKFKSSESILRGILDSDSFDLPSK-LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
Query: 653 SIDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQ 832
+ D F R G + ++SC+ +S L+ S + A+GFYK+MR N + P VYT NM++
Sbjct: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
Query: 833 CLLRIGKVSDARQVF 877
++G + A +VF
Sbjct: 272 AFCKLGIIERAVEVF 286
>ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g09680 gi|2160161|gb|AAB60724.1| F21M12.7
gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 88.2 bits (217), Expect = 4e-15
Identities = 52/196 (26%), Positives = 100/196 (51%), Gaps = 3/196 (1%)
Frame = +2
Query: 302 DWNSLKKYAMYLTADHMVHIIR--TAKLKPAIIFSFFNWLEHRRWFRHSHSSYSAMIHVL 475
D S++K L+ H+V +I L IF+FF ++ + FR + +Y + L
Sbjct: 69 DCPSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFL 128
Query: 476 CNAKMYSEAENLMLCLVRRKPPDLLIEVLLQ-TQIPGKPLCHLVYNMMLVCYGRCGKLQS 652
+M++EA++L+ +V RK + V + ++ P+C + + +++ Y G +
Sbjct: 129 AVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPD 188
Query: 653 SIDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMIIQ 832
+I CFRL R + ++ C L+ +++ N GFY ++ + G VY FN+++
Sbjct: 189 AIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMN 248
Query: 833 CLLRIGKVSDARQVFD 880
+ G +SDA++VFD
Sbjct: 249 KFCKEGNISDAQKVFD 264
>ref|XP_004250536.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Solanum lycopersicum]
Length = 608
Score = 83.6 bits (205), Expect(2) = 4e-15
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Frame = +2
Query: 311 SLKKYAMYLTADHMVHIIRTA--KLKPAIIFSFFNWLEHRRWFRHSHS--SYSAMIHVLC 478
SLK L H++++I L P+ + SFF WL R H+ +YS+M L
Sbjct: 66 SLKPLLPSLKPHHIINLINLNPHSLPPSSLLSFFTWLSTSNPSRFCHTLHTYSSMTLFLY 125
Query: 479 NAKMYSEAENLMLCLVRRKPPD---LLIEVLLQTQIPGKPLCHLVYNMMLVCYGRCGKLQ 649
KMY + + + +V RK D + + L+ + V N ++ Y G +
Sbjct: 126 THKMYPQGHSFINTIVSRKGKDSAFTVFQAFLKAKGTNFTSFVNVLNGLIDVYLDLGFVS 185
Query: 650 SSIDCFRLFRTNGIMTSVKSCHYLVSWLIQSNLAEEAVGFYKKMRENGLVPRVYTFNMII 829
+I CFRL + N I +SC ++ +L++ N A FYK++ E G VY FN+++
Sbjct: 186 DAIQCFRLIQKNKIKFPFQSCTKVLEYLMKLNSPMVAFDFYKELLEYGYPANVYFFNVLM 245
Query: 830 QCLLRIGKVSDARQVF 877
L + GK+ +AR VF
Sbjct: 246 SKLCKEGKMMEARSVF 261
Score = 25.0 bits (53), Expect(2) = 4e-15
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 93 AMPLTFLPVLTHNSNHKVCLQLSLHNPTTPCKHTNPPTPP 212
A+ T P L H LS PTTP T PP PP
Sbjct: 7 ALKKTLSPPLHH---------LSTTTPTTPPWFTPPPPPP 37