BLASTX nr result
ID: Ephedra27_contig00024151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00024151
(508 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006878653.1| hypothetical protein AMTR_s00011p00265800 [A... 155 4e-36
ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containi... 153 3e-35
ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containi... 153 3e-35
ref|XP_006428510.1| hypothetical protein CICLE_v100138542mg, par... 153 3e-35
gb|EOY10001.1| Pentatricopeptide repeat (PPR) superfamily protei... 152 6e-35
ref|XP_002309826.2| pentatricopeptide repeat-containing family p... 151 8e-35
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34
emb|CBI26570.3| unnamed protein product [Vitis vinifera] 150 1e-34
gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis] 150 2e-34
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 150 2e-34
ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Popu... 149 3e-34
ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containi... 149 3e-34
ref|XP_002327945.1| predicted protein [Populus trichocarpa] 149 3e-34
gb|EMJ07903.1| hypothetical protein PRUPE_ppa023974mg [Prunus pe... 149 5e-34
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,... 147 2e-33
ref|XP_006590462.1| PREDICTED: pentatricopeptide repeat-containi... 144 1e-32
ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containi... 144 2e-32
ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containi... 144 2e-32
tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays] 144 2e-32
gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays] 144 2e-32
>ref|XP_006878653.1| hypothetical protein AMTR_s00011p00265800 [Amborella trichopoda]
gi|548831996|gb|ERM94798.1| hypothetical protein
AMTR_s00011p00265800 [Amborella trichopoda]
Length = 1522
Score = 155 bits (393), Expect = 4e-36
Identities = 82/167 (49%), Positives = 110/167 (65%), Gaps = 2/167 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F ++PE VQV+NSMMGVYA+ G +D QELL M+ RG +P++V+ N LI AR K
Sbjct: 285 FSRAKPEIGNVVQVYNSMMGVYARQGRFDDAQELLKLMRRRGCEPDLVSFNTLINARAKA 344
Query: 185 E--KNVSTRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
S D+L EIR SGL PD++TYNTLI A +SEEAV VFQDM+ +G PDL
Sbjct: 345 RFLSPGSAMDILNEIRKSGLRPDIITYNTLISSCASGSSSEEAVRVFQDMEHHGCLPDLW 404
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARN 499
T +IS +G G +E+ ++++ L KG PD+ T+N+LLYA A+N
Sbjct: 405 TYNAMISVFGRSGNLEEVENIYNELGRKGFFPDAVTFNSLLYAYAKN 451
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/152 (28%), Positives = 78/152 (51%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+M+ V+ + G ++V+ + + + +G P+ VT N L+ A K + + E+
Sbjct: 406 YNAMISVFGRSGNLEEVENIYNELGRKGFFPDAVTFNSLLYAYAKNRNLEKVKWICEEMV 465
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+G D + YNTLI + + G E +++++MK G PD T LI G G V+
Sbjct: 466 RAGFKLDEIAYNTLIHMYGKMGKHELGFQLYEEMKLAGCTPDSVTFTVLIDSLGKAGQVK 525
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+A D+ + D + P TY+AL+ A+ G
Sbjct: 526 EAADVLSEMLDARVRPTLRTYSALICGYAKAG 557
Score = 73.9 bits (180), Expect = 2e-11
Identities = 41/134 (30%), Positives = 71/134 (52%)
Frame = +2
Query: 44 VHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEI 223
V++S++ +Y CG ++K + LL M+ GI+P++ T+++L+ + + +VL I
Sbjct: 1105 VYHSLLKIYRNCGSHEKAENLLVKMKDDGIEPSLATMHLLMDSYGQAGLPDGAENVLKGI 1164
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
+ SGLN V Y ++I + +NG E +E MKR+G +PD C I
Sbjct: 1165 KSSGLNVGTVPYVSVIDVYLKNGEYELGIEKMLQMKRDGVDPDYRVWTCFIRAASRCRQR 1224
Query: 404 EKATDLFDGLADKG 445
+A L + L+D G
Sbjct: 1225 NEALKLLNCLSDVG 1238
Score = 73.6 bits (179), Expect = 3e-11
Identities = 44/149 (29%), Positives = 81/149 (54%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ +M+G++++ V+ ++ M+ G K ++ LN ++ E T DV
Sbjct: 962 TMHLYRNMVGLFSRGKRVRDVELMVAEMEEAGFKCDLFILNCMLRMYTGIEDFRKTVDVY 1021
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
+I++ G PD TYN LI + +++ +EEA + +M+R G +P L + K L+S G
Sbjct: 1022 RKIQEMGFEPDEDTYNILIIMYSKDLRAEEAFSLLNEMRREGLDPKLGSYKSLLSSCGKQ 1081
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALL 481
+ E+A LF + KG D G Y++LL
Sbjct: 1082 ELWEEAEVLFKEMVSKGFKLDRGVYHSLL 1110
Score = 71.2 bits (173), Expect = 1e-10
Identities = 43/153 (28%), Positives = 73/153 (47%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G ++ +L M+L G P+ VT +LI + K + DVL E+
Sbjct: 476 YNTLIHMYGKMGKHELGFQLYEEMKLAGCTPDSVTFTVLIDSLGKAGQVKEAADVLSEML 535
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D+ + P + TY+ LI A+ G +EA E F M ++G +PD ++
Sbjct: 536 DARVRPTLRTYSALICGYAKAGMRDEAGETFDWMVKSGIKPDHLAYSVMLDVLIRANDTR 595
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
K L+ + GL PD Y +L ++ K
Sbjct: 596 KVMGLYQRMVRDGLRPDQSLYETMLQVFVKDSK 628
Score = 68.6 bits (166), Expect = 8e-10
Identities = 46/149 (30%), Positives = 70/149 (46%)
Frame = +2
Query: 50 NSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRD 229
NS++ YAK +KV+ + M G K + + N LI K K+ + E++
Sbjct: 442 NSLLYAYAKNRNLEKVKWICEEMVRAGFKLDEIAYNTLIHMYGKMGKHELGFQLYEEMKL 501
Query: 230 SGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEK 409
+G PD VT+ LI + G +EA +V +M P L T LI Y GM ++
Sbjct: 502 AGCTPDSVTFTVLIDSLGKAGQVKEAADVLSEMLDARVRPTLRTYSALICGYAKAGMRDE 561
Query: 410 ATDLFDGLADKGLCPDSGTYNALLYALAR 496
A + FD + G+ PD Y+ +L L R
Sbjct: 562 AGETFDWMVKSGIKPDHLAYSVMLDVLIR 590
Score = 63.2 bits (152), Expect = 4e-08
Identities = 42/151 (27%), Positives = 72/151 (47%)
Frame = +2
Query: 50 NSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRD 229
N M+ +Y + K ++ +Q G +P+ T NILI K + +L E+R
Sbjct: 1002 NCMLRMYTGIEDFRKTVDVYRKIQEMGFEPDEDTYNILIIMYSKDLRAEEAFSLLNEMRR 1061
Query: 230 SGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEK 409
GL+P + +Y +L+ + EEA +F++M G++ D L+ Y N G EK
Sbjct: 1062 EGLDPKLGSYKSLLSSCGKQELWEEAEVLFKEMVSKGFKLDRGVYHSLLKIYRNCGSHEK 1121
Query: 410 ATDLFDGLADKGLCPDSGTYNALLYALARNG 502
A +L + D G+ P T + L+ + + G
Sbjct: 1122 AENLLVKMKDDGIEPSLATMHLLMDSYGQAG 1152
Score = 58.5 bits (140), Expect = 9e-07
Identities = 37/153 (24%), Positives = 75/153 (49%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N ++ +Y+K ++ LL+ M+ G+ P + + L+++ K+E + E+
Sbjct: 1036 YNILIIMYSKDLRAEEAFSLLNEMRREGLDPKLGSYKSLLSSCGKQELWEEAEVLFKEMV 1095
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
G D Y++L+ + G+ E+A + MK +G EP L T L+ YG G+ +
Sbjct: 1096 SKGFKLDRGVYHSLLKIYRNCGSHEKAENLLVKMKDDGIEPSLATMHLLMDSYGQAGLPD 1155
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
A ++ G+ GL + Y +++ +NG+
Sbjct: 1156 GAENVLKGIKSSGLNVGTVPYVSVIDVYLKNGE 1188
Score = 55.1 bits (131), Expect = 1e-05
Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNV-STRDV 211
+V+ N +M G D++ ++ +Q G K + T+ +++ A F R N+ + +
Sbjct: 892 TVESINGLMEALINSGRLDELYVVIQELQEMGFKISKSTILLMLDA-FARAGNIFEVKKI 950
Query: 212 LCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGN 391
++ +G P + Y ++GL + + + +M+ G++ DL C++ Y
Sbjct: 951 YHGMKAAGYLPTMHLYRNMVGLFSRGKRVRDVELMVAEMEEAGFKCDLFILNCMLRMYTG 1010
Query: 392 IGMVEKATDLFDGLADKGLCPDSGTYNALLYALARN 499
I K D++ + + G PD TYN L+ +++
Sbjct: 1011 IEDFRKTVDVYRKIQEMGFEPDEDTYNILIIMYSKD 1046
>ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X6 [Citrus sinensis]
Length = 1278
Score = 153 bits (386), Expect = 3e-35
Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 TFQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFK 181
TF + +VQV+N+MMG+YA+ G + KVQELL M+ RG +P++V+ N LI AR +
Sbjct: 229 TFMRAESAVDDTVQVYNAMMGIYARNGRFQKVQELLDLMRKRGCEPDLVSFNTLINARLR 288
Query: 182 REKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDL 355
V D+L E+R SGL PD++TYNT+I + N EEA++V+ D++ + +PDL
Sbjct: 289 SGAMVPNLGVDLLNEVRRSGLRPDIITYNTIISACSRESNLEEAMKVYGDLEAHNCQPDL 348
Query: 356 PTCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG G+ EKA LF L KG PD+ TYN+LLYA AR G V
Sbjct: 349 WTYNAMISVYGRCGLFEKAEQLFKELESKGFFPDAVTYNSLLYAFAREGNV 399
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Frame = +2
Query: 11 NSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREK 190
N +P+ T +N+M+ VY +CG+++K ++L ++ +G P+ VT N L+ A F RE
Sbjct: 343 NCQPDLWT----YNAMISVYGRCGLFEKAEQLFKELESKGFFPDAVTYNSLLYA-FAREG 397
Query: 191 NV-STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCK 367
NV +++ + G D +TYNT+I + + G + A+++++DMK +G PD+ T
Sbjct: 398 NVEKVKEISENMLKMGFGKDEMTYNTIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYT 457
Query: 368 CLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
LI G + +A ++ + D + P TY+AL+ A+ GK
Sbjct: 458 VLIDSLGKANKISEAANVMSEMLDASVKPTLRTYSALICGYAKAGK 503
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/153 (28%), Positives = 74/153 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G +D +L M+L G P++VT +LI + K K +V+ E+
Sbjct: 421 YNTIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYTVLIDSLGKANKISEAANVMSEML 480
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D+ + P + TY+ LI A+ G EA + F+ M+R+G PD ++ +
Sbjct: 481 DASVKPTLRTYSALICGYAKAGKRLEAEKTFECMRRSGIRPDHLAYSVMLDIFLRFNETN 540
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA L+ + G D Y ++ L R K
Sbjct: 541 KAMMLYQEMVSNGFTLDQALYEIMIGVLGRENK 573
Score = 74.7 bits (182), Expect = 1e-11
Identities = 45/156 (28%), Positives = 80/156 (51%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ M+G++ K V+ ++ M+ G KP++ N ++ E T V
Sbjct: 905 TMYLYRVMIGLFCKGKRVRDVEAMVSEMKEAGFKPDLSIWNSMLKLYTGIEDFKKTIQVY 964
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
EI+++ L PD T+NTLI + + EE + + Q+M++ G EP L T K LIS +G
Sbjct: 965 QEIQEADLQPDEDTFNTLIIMYCRDCRPEEGLSLMQEMRKLGLEPKLDTYKSLISAFGKQ 1024
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+E+A +LF+ L K D Y+ ++ +G
Sbjct: 1025 QQLEQAEELFEELRSKRCKLDRSFYHTMMKIYRNSG 1060
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/133 (24%), Positives = 64/133 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+++MM +Y G + K + LL+ M+ G++P I T+++L+ + + VL ++
Sbjct: 1049 YHTMMKIYRNSGYHSKSENLLNMMKESGVEPTIATMHLLMVSYSSSGQPQEAEKVLSNLK 1108
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+ LN + Y+++I NG+S ++ +MK G EPD C +
Sbjct: 1109 GTSLNLSTLPYSSVIAAYLRNGDSAVGIQKLIEMKEEGIEPDHRIWTCFVRAASLSQCSS 1168
Query: 407 KATDLFDGLADKG 445
+A L + + D G
Sbjct: 1169 EAIILLNAIRDAG 1181
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/156 (22%), Positives = 75/156 (48%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NSM+ +Y + K ++ +Q ++P+ T N LI + + ++
Sbjct: 941 LSIWNSMLKLYTGIEDFKKTIQVYQEIQEADLQPDEDTFNTLIIMYCRDCRPEEGLSLMQ 1000
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E+R GL P + TY +LI + E+A E+F++++ + D ++ Y N G
Sbjct: 1001 EMRKLGLEPKLDTYKSLISAFGKQQQLEQAEELFEELRSKRCKLDRSFYHTMMKIYRNSG 1060
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
K+ +L + + + G+ P T + L+ + + +G+
Sbjct: 1061 YHSKSENLLNMMKESGVEPTIATMHLLMVSYSSSGQ 1096
>ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568877582|ref|XP_006491808.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877584|ref|XP_006491809.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X3 [Citrus sinensis]
gi|568877586|ref|XP_006491810.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X4 [Citrus sinensis]
gi|568877588|ref|XP_006491811.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X5 [Citrus sinensis]
Length = 1459
Score = 153 bits (386), Expect = 3e-35
Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 TFQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFK 181
TF + +VQV+N+MMG+YA+ G + KVQELL M+ RG +P++V+ N LI AR +
Sbjct: 229 TFMRAESAVDDTVQVYNAMMGIYARNGRFQKVQELLDLMRKRGCEPDLVSFNTLINARLR 288
Query: 182 REKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDL 355
V D+L E+R SGL PD++TYNT+I + N EEA++V+ D++ + +PDL
Sbjct: 289 SGAMVPNLGVDLLNEVRRSGLRPDIITYNTIISACSRESNLEEAMKVYGDLEAHNCQPDL 348
Query: 356 PTCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG G+ EKA LF L KG PD+ TYN+LLYA AR G V
Sbjct: 349 WTYNAMISVYGRCGLFEKAEQLFKELESKGFFPDAVTYNSLLYAFAREGNV 399
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Frame = +2
Query: 11 NSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREK 190
N +P+ T +N+M+ VY +CG+++K ++L ++ +G P+ VT N L+ A F RE
Sbjct: 343 NCQPDLWT----YNAMISVYGRCGLFEKAEQLFKELESKGFFPDAVTYNSLLYA-FAREG 397
Query: 191 NV-STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCK 367
NV +++ + G D +TYNT+I + + G + A+++++DMK +G PD+ T
Sbjct: 398 NVEKVKEISENMLKMGFGKDEMTYNTIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYT 457
Query: 368 CLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
LI G + +A ++ + D + P TY+AL+ A+ GK
Sbjct: 458 VLIDSLGKANKISEAANVMSEMLDASVKPTLRTYSALICGYAKAGK 503
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/153 (28%), Positives = 74/153 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G +D +L M+L G P++VT +LI + K K +V+ E+
Sbjct: 421 YNTIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYTVLIDSLGKANKISEAANVMSEML 480
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D+ + P + TY+ LI A+ G EA + F+ M+R+G PD ++ +
Sbjct: 481 DASVKPTLRTYSALICGYAKAGKRLEAEKTFECMRRSGIRPDHLAYSVMLDIFLRFNETN 540
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA L+ + G D Y ++ L R K
Sbjct: 541 KAMMLYQEMVSNGFTLDQALYEIMIGVLGRENK 573
Score = 74.7 bits (182), Expect = 1e-11
Identities = 45/156 (28%), Positives = 80/156 (51%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ M+G++ K V+ ++ M+ G KP++ N ++ E T V
Sbjct: 905 TMYLYRVMIGLFCKGKRVRDVEAMVSEMKEAGFKPDLSIWNSMLKLYTGIEDFKKTIQVY 964
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
EI+++ L PD T+NTLI + + EE + + Q+M++ G EP L T K LIS +G
Sbjct: 965 QEIQEADLQPDEDTFNTLIIMYCRDCRPEEGLSLMQEMRKLGLEPKLDTYKSLISAFGKQ 1024
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+E+A +LF+ L K D Y+ ++ +G
Sbjct: 1025 QQLEQAEELFEELRSKRCKLDRSFYHTMMKIYRNSG 1060
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/133 (24%), Positives = 64/133 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+++MM +Y G + K + LL+ M+ G++P I T+++L+ + + VL ++
Sbjct: 1049 YHTMMKIYRNSGYHSKSENLLNMMKESGVEPTIATMHLLMVSYSSSGQPQEAEKVLSNLK 1108
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+ LN + Y+++I NG+S ++ +MK G EPD C +
Sbjct: 1109 GTSLNLSTLPYSSVIAAYLRNGDSAVGIQKLIEMKEEGIEPDHRIWTCFVRAASLSQCSS 1168
Query: 407 KATDLFDGLADKG 445
+A L + + D G
Sbjct: 1169 EAIILLNAIRDAG 1181
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/156 (22%), Positives = 75/156 (48%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NSM+ +Y + K ++ +Q ++P+ T N LI + + ++
Sbjct: 941 LSIWNSMLKLYTGIEDFKKTIQVYQEIQEADLQPDEDTFNTLIIMYCRDCRPEEGLSLMQ 1000
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E+R GL P + TY +LI + E+A E+F++++ + D ++ Y N G
Sbjct: 1001 EMRKLGLEPKLDTYKSLISAFGKQQQLEQAEELFEELRSKRCKLDRSFYHTMMKIYRNSG 1060
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
K+ +L + + + G+ P T + L+ + + +G+
Sbjct: 1061 YHSKSENLLNMMKESGVEPTIATMHLLMVSYSSSGQ 1096
>ref|XP_006428510.1| hypothetical protein CICLE_v100138542mg, partial [Citrus
clementina] gi|557530567|gb|ESR41750.1| hypothetical
protein CICLE_v100138542mg, partial [Citrus clementina]
Length = 1110
Score = 153 bits (386), Expect = 3e-35
Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 TFQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFK 181
TF + +VQV+N+MMG+YA+ G + KVQELL M+ RG +P++V+ N LI AR +
Sbjct: 102 TFMRAESAVDDTVQVYNAMMGIYARNGRFQKVQELLDLMRKRGCEPDLVSFNTLINARLR 161
Query: 182 REKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDL 355
V D+L E+R SGL PD++TYNT+I + N EEA++V+ D++ + +PDL
Sbjct: 162 SGAMVPNLGVDLLNEVRRSGLRPDIITYNTIISACSRESNLEEAMKVYGDLEAHNCQPDL 221
Query: 356 PTCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG G+ EKA LF L KG PD+ TYN+LLYA AR G V
Sbjct: 222 WTYNAMISVYGRCGLFEKAEQLFKELESKGFFPDAVTYNSLLYAFAREGNV 272
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Frame = +2
Query: 11 NSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREK 190
N +P+ T +N+M+ VY +CG+++K ++L ++ +G P+ VT N L+ A F RE
Sbjct: 216 NCQPDLWT----YNAMISVYGRCGLFEKAEQLFKELESKGFFPDAVTYNSLLYA-FAREG 270
Query: 191 NV-STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCK 367
NV +++ + G D +TYNT+I + + G + A+++++DMK +G PD+ T
Sbjct: 271 NVEKVKEISENMLKMGFGKDEMTYNTIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYT 330
Query: 368 CLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
LI G + +A ++ + D + P TY+AL+ A+ GK
Sbjct: 331 VLIDSLGKANKISEAANVMSEMLDASVKPTLRTYSALICGYAKAGK 376
Score = 79.7 bits (195), Expect = 4e-13
Identities = 44/153 (28%), Positives = 75/153 (49%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G +D +L M+L G P++VT +LI + K K +V+ E+
Sbjct: 294 YNTIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYTVLIDSLGKANKISEAANVMSEML 353
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D+ + P + TY+ LI A+ G EA + F+ M+R+G PD ++ +
Sbjct: 354 DASVKPTLRTYSALICGYAKAGKRLEAEKTFECMRRSGIRPDHLAYSVMLDIFLRFNETN 413
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA L+ + G PD Y ++ L R K
Sbjct: 414 KAMMLYQEMVSNGFTPDQALYEIMIGVLGRENK 446
Score = 65.5 bits (158), Expect = 7e-09
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILIT--ARFKREKNVST--------- 202
M+ +A+ G +V+++ H M+ G P + ++I + KR ++V
Sbjct: 750 MLDAFARSGNIFEVKKIYHGMKAAGYFPTMYLYRVMIGLFCKGKRVRDVEAMVSEMKEAG 809
Query: 203 --------RDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
EI+++ L PD T+NTLI + + EE + + +M++ G EP L
Sbjct: 810 FKPDLSIWNSSSAEIQEADLQPDEDTFNTLIIMYCRDCRPEEGLSLMHEMRKLGLEPKLD 869
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
T K LIS +G +E+A +LF+ L K D Y+ ++ +G
Sbjct: 870 TYKSLISAFGKQQQLEQAEELFEELRSKRCKLDRSFYHTMMKIYRNSG 917
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/133 (24%), Positives = 64/133 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+++MM +Y G + K + LL+ M+ G++P I T+++L+ + + VL ++
Sbjct: 906 YHTMMKIYRNSGYHSKSENLLNMMKESGVEPTIATMHLLMVSYSSSGQPQEAEKVLSNLK 965
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+ LN + Y+++I NG+S ++ +MK G EPD C +
Sbjct: 966 GTSLNLSTLPYSSVIAAYLRNGDSAVGIQKLIEMKEEGIEPDHRIWTCFVRAASLSQCSS 1025
Query: 407 KATDLFDGLADKG 445
+A L + + D G
Sbjct: 1026 EAIILLNAIRDAG 1038
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/151 (23%), Positives = 74/151 (49%)
Frame = +2
Query: 50 NSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRD 229
N+++ +Y + ++ L+H M+ G++P + T LI+A K+++ ++ E+R
Sbjct: 837 NTLIIMYCRDCRPEEGLSLMHEMRKLGLEPKLDTYKSLISAFGKQQQLEQAEELFEELRS 896
Query: 230 SGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEK 409
D Y+T++ + +G ++ + MK +G EP + T L+ Y + G ++
Sbjct: 897 KRCKLDRSFYHTMMKIYRNSGYHSKSENLLNMMKESGVEPTIATMHLLMVSYSSSGQPQE 956
Query: 410 ATDLFDGLADKGLCPDSGTYNALLYALARNG 502
A + L L + Y++++ A RNG
Sbjct: 957 AEKVLSNLKGTSLNLSTLPYSSVIAAYLRNG 987
>gb|EOY10001.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 1458
Score = 152 bits (383), Expect = 6e-35
Identities = 81/170 (47%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + P +VQV+N+MMGVYA+ G + KVQELL M+ RG +P++V+ N LI A+ K
Sbjct: 233 FTRAEPAVGNTVQVYNAMMGVYARNGRFQKVQELLDLMRERGCEPDLVSFNTLINAKLKA 292
Query: 185 EKNVSTRDV--LCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
+ V L E+R SGL PD++TYNTLI + N EEA++VF DM + +PD+
Sbjct: 293 GAMLPDLGVELLNEVRRSGLRPDIITYNTLISACSRESNLEEAMKVFDDMDGHNCQPDIW 352
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG GM KA LF L KG PD+ TYN+LLYA AR G V
Sbjct: 353 TYNAMISVYGRCGMAYKAEQLFRDLESKGFFPDAVTYNSLLYAFAREGNV 402
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/156 (33%), Positives = 91/156 (58%), Gaps = 1/156 (0%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ +N+M+ VY +CG+ K ++L ++ +G P+ VT N L+ A F RE NV +C
Sbjct: 351 IWTYNAMISVYGRCGMAYKAEQLFRDLESKGFFPDAVTYNSLLYA-FAREGNVDKVKEIC 409
Query: 218 -EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
E+ + GL D +TYNT+I + + G + A+++++DMK +G PD+ T LI G
Sbjct: 410 EEMVEIGLGKDEMTYNTIIHMYGKQGQHDLALQLYRDMKLSGRNPDVVTYTVLIDSLGKA 469
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+++A+++ + D G+ P TY+AL+ A+ G
Sbjct: 470 NKIKEASNVMSEMLDVGVKPTVRTYSALICGYAKAG 505
Score = 77.4 bits (189), Expect = 2e-12
Identities = 47/154 (30%), Positives = 75/154 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G +D +L M+L G P++VT +LI + K K +V+ E+
Sbjct: 424 YNTIIHMYGKQGQHDLALQLYRDMKLSGRNPDVVTYTVLIDSLGKANKIKEASNVMSEML 483
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D G+ P V TY+ LI A+ G + EA E F M+R+G D ++
Sbjct: 484 DVGVKPTVRTYSALICGYAKAGMAVEAEETFNCMRRSGIRLDFLAYSVMLDILLRCNKTT 543
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
KA L+ + G PD Y +L AL + K+
Sbjct: 544 KALLLYREMVRDGFTPDHTLYEVMLQALRKENKL 577
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/149 (27%), Positives = 76/149 (51%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ M ++ K + ++ M+ G KP++ N ++ E T +
Sbjct: 907 TMHLYRIMTRLFCKGKRVRDAEAMVSEMEEAGFKPDLSIWNSMLKLYSGIEDYKKTAQIY 966
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
+I+++GL PD TYNTLI + + EE + + +M++ G EP L T K LIS +G
Sbjct: 967 QQIKEAGLEPDEDTYNTLIIMYCRDRRPEEGLSLMYEMRKVGLEPKLDTYKSLISAFGKQ 1026
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALL 481
++E+A +LF+ L K D Y+ ++
Sbjct: 1027 QLLEQAEELFNELHSKCYKLDRSFYHTMM 1055
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/133 (24%), Positives = 63/133 (47%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+++MM ++ G + K + LL M+ G++P I T+++L+ + + VL ++
Sbjct: 1051 YHTMMKIFRNAGNHSKAESLLSMMKEAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTSLK 1110
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++GLN + Y+++I NG+ ++ +MK+ G D C I
Sbjct: 1111 ETGLNLTTLPYSSVINAYLRNGDYNVGIQKLMEMKKEGLAVDHRIWTCFIRAASLSNHTS 1170
Query: 407 KATDLFDGLADKG 445
+A L + L D G
Sbjct: 1171 EAIILLNALRDAG 1183
Score = 60.1 bits (144), Expect = 3e-07
Identities = 37/156 (23%), Positives = 73/156 (46%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NSM+ +Y+ Y K ++ ++ G++P+ T N LI + + ++
Sbjct: 943 LSIWNSMLKLYSGIEDYKKTAQIYQQIKEAGLEPDEDTYNTLIIMYCRDRRPEEGLSLMY 1002
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E+R GL P + TY +LI + E+A E+F ++ Y+ D ++ + N G
Sbjct: 1003 EMRKVGLEPKLDTYKSLISAFGKQQLLEQAEELFNELHSKCYKLDRSFYHTMMKIFRNAG 1062
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA L + + G+ P T + L+ + +G+
Sbjct: 1063 NHSKAESLLSMMKEAGVEPTIATMHLLMVSYGSSGQ 1098
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/152 (24%), Positives = 75/152 (49%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y + ++ L++ M+ G++P + T LI+A K++ ++ E+
Sbjct: 981 YNTLIIMYCRDRRPEEGLSLMYEMRKVGLEPKLDTYKSLISAFGKQQLLEQAEELFNELH 1040
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D Y+T++ + GN +A + MK G EP + T L+ YG+ G +
Sbjct: 1041 SKCYKLDRSFYHTMMKIFRNAGNHSKAESLLSMMKEAGVEPTIATMHLLMVSYGSSGQPQ 1100
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+A + L + GL + Y++++ A RNG
Sbjct: 1101 EAEKVLTSLKETGLNLTTLPYSSVINAYLRNG 1132
Score = 55.5 bits (132), Expect = 7e-06
Identities = 34/147 (23%), Positives = 69/147 (46%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSG 235
M+ +A+ G +V+++ M+ G P + I+ K ++ ++ E+ ++G
Sbjct: 879 MLDAFAQAGNIFEVKKIYSGMKAAGYYPTMHLYRIMTRLFCKGKRVRDAEAMVSEMEEAG 938
Query: 236 LNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKAT 415
PD+ +N+++ L + + ++ +++Q +K G EPD T LI Y E+
Sbjct: 939 FKPDLSIWNSMLKLYSGIEDYKKTAQIYQQIKEAGLEPDEDTYNTLIIMYCRDRRPEEGL 998
Query: 416 DLFDGLADKGLCPDSGTYNALLYALAR 496
L + GL P TY +L+ A +
Sbjct: 999 SLMYEMRKVGLEPKLDTYKSLISAFGK 1025
>ref|XP_002309826.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550333963|gb|EEE90276.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1484
Score = 151 bits (382), Expect = 8e-35
Identities = 80/170 (47%), Positives = 108/170 (63%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + P +VQV+N+MMGVYA+ G ++KVQELL M+ RG KP++V+ N LI AR K
Sbjct: 247 FMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKA 306
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
+ ++L E+R SGL PD +TYNTLI + N EEA +VF DM+ + +PDL
Sbjct: 307 GAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLW 366
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG G+ KA LF+ L +G PD+ +YN+LLYA AR G V
Sbjct: 367 TYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNV 416
Score = 93.2 bits (230), Expect = 3e-17
Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNV-STRDVLCEI 223
+N+M+ VY +CG+ K ++L + ++ RG P+ V+ N L+ A F RE NV +++ E+
Sbjct: 368 YNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYA-FAREGNVEKVKEIWEEM 426
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
G D +TYNT+I + + G +E A+++++DM+ +G PD T LI G +
Sbjct: 427 VKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKI 486
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
+A + + + G+ P TY+AL+ A+ GK
Sbjct: 487 AEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGK 520
Score = 73.9 bits (180), Expect = 2e-11
Identities = 43/136 (31%), Positives = 68/136 (50%)
Frame = +2
Query: 95 VQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSGLNPDVVTYNTLIG 274
V+ +L M+ G KP++ N ++ E T V I++ GL PD TYNTLI
Sbjct: 941 VEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIV 1000
Query: 275 LSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCP 454
+ + EE + +M+ G EP L T K L++ +G +VE+A +LF+ L KG
Sbjct: 1001 MYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKL 1060
Query: 455 DSGTYNALLYALARNG 502
D Y+ ++ +G
Sbjct: 1061 DRSFYHTMMKIYRNSG 1076
Score = 70.1 bits (170), Expect = 3e-10
Identities = 44/154 (28%), Positives = 72/154 (46%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+M+ +Y K G + +L MQ G P+ VT +LI + K K V+ E+
Sbjct: 438 YNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEML 497
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++G+ P + TY+ LI A+ G EA E F M R+G PD ++ + +
Sbjct: 498 NTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPK 557
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
+A L+ + G+ D Y +L L + KV
Sbjct: 558 RAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKV 591
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/152 (23%), Positives = 78/152 (51%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y + ++ L+H M++ G++P + T L+ + K++ ++ E++
Sbjct: 995 YNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQ 1054
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
G D Y+T++ + +G+ +A +F MK G EP + T L+ YG+ G +
Sbjct: 1055 SKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQ 1114
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+A + L + G + Y++++ A RNG
Sbjct: 1115 EAEKVLSNLKETGSNLSTLPYSSVIDAYLRNG 1146
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/133 (24%), Positives = 62/133 (46%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+++MM +Y G + K + L M+ G++P I T+++L+ + + VL ++
Sbjct: 1065 YHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK 1124
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++G N + Y+++I NG+ ++ MK+ G EPD C I
Sbjct: 1125 ETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTS 1184
Query: 407 KATDLFDGLADKG 445
+A L + L D G
Sbjct: 1185 EAIVLLNALQDAG 1197
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/156 (23%), Positives = 76/156 (48%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NS++ +Y + K ++ ++ G++P+ T N LI + + ++
Sbjct: 957 LSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMH 1016
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E+R +GL P + TY +L+ + E+A E+F++++ G + D ++ Y N G
Sbjct: 1017 EMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSG 1076
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA LF + D G+ P T + L+ + +G+
Sbjct: 1077 SHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQ 1112
Score = 58.2 bits (139), Expect = 1e-06
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNIL--ITARFKREKNVSTRDVLCEIRD 229
M+ +A+ G +V+++ H M+ G P + ++ + +R K+ ++V +L E+ +
Sbjct: 893 MLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEA--MLSEMEE 950
Query: 230 SGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEK 409
+G PD+ +N+++ + + + ++V+Q +K +G EPD T LI Y E+
Sbjct: 951 AGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEE 1010
Query: 410 ATDLFDGLADKGLCPDSGTYNALLYALAR 496
L + GL P TY +L+ + +
Sbjct: 1011 GFSLMHEMRVAGLEPKLDTYKSLVASFGK 1039
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 150 bits (380), Expect = 1e-34
Identities = 80/170 (47%), Positives = 108/170 (63%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + + +VQV+N+MMGVYA+ G + KVQELL M+ RG +P++V+ N LI AR K
Sbjct: 211 FARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKS 270
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
V+ ++L E+R SG+ PD++TYNTLI + N EEAV+V+ DM + +PDL
Sbjct: 271 GTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLW 330
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG GM +A LF L KG PD+ TYN+LLYA AR G V
Sbjct: 331 TYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNV 380
Score = 88.2 bits (217), Expect = 1e-15
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCE-I 223
+N+M+ VY +CG+ + L ++ +G P+ VT N L+ A F RE NV +CE +
Sbjct: 332 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYA-FAREGNVDKVKEICEDM 390
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
G D +TYNT+I + + G + A +++ DMK +G PD T LI G M+
Sbjct: 391 VKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMI 450
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
++A ++ + + + P T++AL+ A+ GK
Sbjct: 451 KEAAEVMSEMLNARVKPTLRTFSALICGYAKAGK 484
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/156 (30%), Positives = 81/156 (51%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ M+G+ AK V+ ++ M++ KP++ N ++ T V
Sbjct: 886 TMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVY 945
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
I+++GL PD TYNTLI + + EE + + +M+R G EP L T K LIS +G +
Sbjct: 946 QLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKL 1005
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
MVE+A +LF+GL K D Y+ ++ +G
Sbjct: 1006 QMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSG 1041
Score = 71.2 bits (173), Expect = 1e-10
Identities = 46/150 (30%), Positives = 73/150 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+NS++ +A+ G DKV+E+ M G + +T N +I KR ++ + +++
Sbjct: 367 YNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMK 426
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
SG +PD VTY LI + +EA EV +M +P L T LI Y G
Sbjct: 427 LSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRV 486
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALAR 496
+A + FD + G+ PD Y+ +L L R
Sbjct: 487 EAEETFDCMLRSGIKPDHLAYSVMLDILLR 516
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/133 (24%), Positives = 64/133 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
++ MM ++ G + K ++LL M+ G++P I T+++L+ + + VL ++
Sbjct: 1030 YHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLK 1089
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
GL + Y+++I +NG+ A++ +MK++G EPD C +
Sbjct: 1090 VEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTS 1149
Query: 407 KATDLFDGLADKG 445
+A L L D G
Sbjct: 1150 EAIVLLKALRDTG 1162
Score = 57.4 bits (137), Expect = 2e-06
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 35/190 (18%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NS++ +Y G + K ++ +Q G+KP+ T N LI + + ++
Sbjct: 922 LSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMH 981
Query: 218 EIRDSGLNPDVVTYNTLIG------------------LSAE-----------------NG 292
E+R GL P + TY +LI LS E +G
Sbjct: 982 EMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSG 1041
Query: 293 NSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYN 472
N +A ++ MK G EP + T L+ Y G E+A + D L +GL + Y+
Sbjct: 1042 NHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYS 1101
Query: 473 ALLYALARNG 502
+++ A +NG
Sbjct: 1102 SVIDAYLKNG 1111
>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 150 bits (380), Expect = 1e-34
Identities = 80/170 (47%), Positives = 108/170 (63%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + + +VQV+N+MMGVYA+ G + KVQELL M+ RG +P++V+ N LI AR K
Sbjct: 186 FARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKS 245
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
V+ ++L E+R SG+ PD++TYNTLI + N EEAV+V+ DM + +PDL
Sbjct: 246 GTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLW 305
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG GM +A LF L KG PD+ TYN+LLYA AR G V
Sbjct: 306 TYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNV 355
Score = 88.2 bits (217), Expect = 1e-15
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCE-I 223
+N+M+ VY +CG+ + L ++ +G P+ VT N L+ A F RE NV +CE +
Sbjct: 307 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYA-FAREGNVDKVKEICEDM 365
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
G D +TYNT+I + + G + A +++ DMK +G PD T LI G M+
Sbjct: 366 VKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMI 425
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
++A ++ + + + P T++AL+ A+ GK
Sbjct: 426 KEAAEVMSEMLNARVKPTLRTFSALICGYAKAGK 459
Score = 71.2 bits (173), Expect = 1e-10
Identities = 46/150 (30%), Positives = 73/150 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+NS++ +A+ G DKV+E+ M G + +T N +I KR ++ + +++
Sbjct: 342 YNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMK 401
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
SG +PD VTY LI + +EA EV +M +P L T LI Y G
Sbjct: 402 LSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRV 461
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALAR 496
+A + FD + G+ PD Y+ +L L R
Sbjct: 462 EAEETFDCMLRSGIKPDHLAYSVMLDILLR 491
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/133 (24%), Positives = 64/133 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
++ MM ++ G + K ++LL M+ G++P I T+++L+ + + VL ++
Sbjct: 612 YHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLK 671
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
GL + Y+++I +NG+ A++ +MK++G EPD C +
Sbjct: 672 VEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTS 731
Query: 407 KATDLFDGLADKG 445
+A L L D G
Sbjct: 732 EAIVLLKALRDTG 744
>gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis]
Length = 1494
Score = 150 bits (379), Expect = 2e-34
Identities = 78/170 (45%), Positives = 108/170 (63%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + P+ +VQV+N+MMG+ A+ G +DKV ELL M+ RG +P++V+ N LI AR K
Sbjct: 253 FTRAEPDIGNTVQVYNAMMGIQARAGRFDKVHELLDLMRERGCEPDLVSFNTLINARLKS 312
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
++L E+R SGL PD++TYNTL+ + N EEA +VF+DM R+ +PDL
Sbjct: 313 GAMAPNLAIELLDEVRRSGLRPDIITYNTLLSGCSRESNLEEATKVFEDMVRHHCQPDLW 372
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS +G GM KA LF L +G PD+ TYN+LLYA AR+G V
Sbjct: 373 TYNAMISVFGRCGMPSKADKLFKELESRGFLPDAVTYNSLLYAFARDGNV 422
Score = 93.6 bits (231), Expect = 2e-17
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCE-I 223
+N+M+ V+ +CG+ K +L ++ RG P+ VT N L+ A F R+ NV +CE +
Sbjct: 374 YNAMISVFGRCGMPSKADKLFKELESRGFLPDAVTYNSLLYA-FARDGNVEKVKEICEDM 432
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
G D +TYNT+I + + G + A ++++DMK G PD T LI G +
Sbjct: 433 VQKGFGKDEMTYNTMIHMYGKQGQHDLAFQLYRDMKTAGRTPDAITYTVLIDSLGKANKI 492
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+A ++ G+ D G+ P TY+AL+ A+ G
Sbjct: 493 TEAANVMSGMLDAGVKPTLRTYSALISGYAKAG 525
Score = 76.6 bits (187), Expect = 3e-12
Identities = 43/153 (28%), Positives = 74/153 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+M+ +Y K G +D +L M+ G P+ +T +LI + K K +V+ +
Sbjct: 444 YNTMIHMYGKQGQHDLAFQLYRDMKTAGRTPDAITYTVLIDSLGKANKITEAANVMSGML 503
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D+G+ P + TY+ LI A+ G +A + F M R+G PD ++ + +
Sbjct: 504 DAGVKPTLRTYSALISGYAKAGMQVDAQKTFDCMVRSGIRPDQIAYSVMLDMFLRFNETK 563
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA L+ + G PD+G Y ++ L R K
Sbjct: 564 KAMALYREMLRDGFIPDNGLYGVMVRVLGRENK 596
Score = 73.2 bits (178), Expect = 3e-11
Identities = 42/137 (30%), Positives = 74/137 (54%)
Frame = +2
Query: 95 VQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSGLNPDVVTYNTLIG 274
V+ ++ M+ G KP++ N ++ E T +V +I+++GL+PD TYNTLI
Sbjct: 948 VEAMVSEMEEAGFKPDLSIWNSVLKLYSSIENFRKTVEVYQQIQEAGLSPDEDTYNTLII 1007
Query: 275 LSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCP 454
+ ++ EE + + ++M+ G EP L T K LIS + + ++A +LF+ L G
Sbjct: 1008 MYCKDSRPEEGLSLMREMRNQGLEPKLDTYKSLISAFSKQQLYDQAEELFEELRSNGRKL 1067
Query: 455 DSGTYNALLYALARNGK 505
D Y+ ++ + RN K
Sbjct: 1068 DRSFYHTMI-KVFRNSK 1083
Score = 65.1 bits (157), Expect = 9e-09
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILIT--ARFKREKNVSTRDVLCEIRD 229
M+ +A+ G +V+++ M+ G PN+ ++I R KR ++V ++ E+ +
Sbjct: 900 MLDAFARAGDVFEVRKIYDGMKAAGYLPNMNLYRVMIRLLCRVKRVRDVEA--MVSEMEE 957
Query: 230 SGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEK 409
+G PD+ +N+++ L + N + VEV+Q ++ G PD T LI Y E+
Sbjct: 958 AGFKPDLSIWNSVLKLYSSIENFRKTVEVYQQIQEAGLSPDEDTYNTLIIMYCKDSRPEE 1017
Query: 410 ATDLFDGLADKGLCPDSGTYNALLYALAR 496
L + ++GL P TY +L+ A ++
Sbjct: 1018 GLSLMREMRNQGLEPKLDTYKSLISAFSK 1046
Score = 62.8 bits (151), Expect = 5e-08
Identities = 40/158 (25%), Positives = 79/158 (50%)
Frame = +2
Query: 29 STSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRD 208
S +N+++ +Y K ++ L+ M+ +G++P + T LI+A K++ +
Sbjct: 996 SPDEDTYNTLIIMYCKDSRPEEGLSLMREMRNQGLEPKLDTYKSLISAFSKQQLYDQAEE 1055
Query: 209 VLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYG 388
+ E+R +G D Y+T+I + + N +A + MK G EP+ T L+ YG
Sbjct: 1056 LFEELRSNGRKLDRSFYHTMIKVFRNSKNPSKAEMLVTMMKEAGMEPNFATMHLLMVSYG 1115
Query: 389 NIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
G +A + + L + GL ++ Y++++ A +NG
Sbjct: 1116 GSGQPGEAEKVLEDLKETGLNLNTLPYSSVIDAYLKNG 1153
Score = 61.6 bits (148), Expect = 1e-07
Identities = 38/156 (24%), Positives = 77/156 (49%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NS++ +Y+ + K E+ +Q G+ P+ T N LI K + ++
Sbjct: 964 LSIWNSVLKLYSSIENFRKTVEVYQQIQEAGLSPDEDTYNTLIIMYCKDSRPEEGLSLMR 1023
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E+R+ GL P + TY +LI ++ ++A E+F++++ NG + D +I + N
Sbjct: 1024 EMRNQGLEPKLDTYKSLISAFSKQQLYDQAEELFEELRSNGRKLDRSFYHTMIKVFRNSK 1083
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA L + + G+ P+ T + L+ + +G+
Sbjct: 1084 NPSKAEMLVTMMKEAGMEPNFATMHLLMVSYGGSGQ 1119
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/133 (24%), Positives = 69/133 (51%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+++M+ V+ K + L+ M+ G++PN T+++L+ + + VL +++
Sbjct: 1072 YHTMIKVFRNSKNPSKAEMLVTMMKEAGMEPNFATMHLLMVSYGGSGQPGEAEKVLEDLK 1131
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++GLN + + Y+++I +NG+ A++ +DM++ G EPD C I
Sbjct: 1132 ETGLNLNTLPYSSVIDAYLKNGDYNVAIQKLKDMEKEGLEPDHRIWTCFIRAASLCQRTS 1191
Query: 407 KATDLFDGLADKG 445
+A L + L+D G
Sbjct: 1192 EAFTLLNALSDTG 1204
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 150 bits (378), Expect = 2e-34
Identities = 80/170 (47%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + +VQV+N+MMGVYA+ G + KVQELL M+ RG +P++V+ N LI AR K
Sbjct: 243 FARAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKS 302
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
V+ ++L E+R SG+ PD++TYNTLI + N EEAV+V+ DM + +PDL
Sbjct: 303 GTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLW 362
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG GM +A LF L KG PD+ TYN+LLYA AR G V
Sbjct: 363 TYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNV 412
Score = 88.6 bits (218), Expect = 8e-16
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCE-I 223
+N+M+ VY +CG+ + L ++ +G P+ VT N L+ A F RE NV +CE +
Sbjct: 364 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYA-FAREGNVDKVKEICEDM 422
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
G D +TYNT+I + + G + A +++ DMK +G PD T LI G M+
Sbjct: 423 VKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMI 482
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
++A ++ + + + P T++AL+ A+ GK
Sbjct: 483 KEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGK 516
Score = 80.5 bits (197), Expect = 2e-13
Identities = 48/156 (30%), Positives = 81/156 (51%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ M+G+ AK V+ ++ M++ KP++ N ++ T V
Sbjct: 918 TMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVY 977
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
I+++GL PD TYNTLI + + EE + + +M+R G EP L T K LIS +G +
Sbjct: 978 QLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKL 1037
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
MVE+A +LF+GL K D Y+ ++ +G
Sbjct: 1038 QMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSG 1073
Score = 71.6 bits (174), Expect = 1e-10
Identities = 46/150 (30%), Positives = 73/150 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+NS++ +A+ G DKV+E+ M G + +T N +I KR ++ + +++
Sbjct: 399 YNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMK 458
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
SG +PD VTY LI + +EA EV +M +P L T LI Y G
Sbjct: 459 LSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRV 518
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALAR 496
+A + FD + G+ PD Y+ +L L R
Sbjct: 519 EAEETFDCMLRSGIKPDHLAYSVMLDILLR 548
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/133 (24%), Positives = 64/133 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
++ MM ++ G + K ++LL M+ G++P I T+++L+ + + VL ++
Sbjct: 1062 YHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLK 1121
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
GL + Y+++I +NG+ A++ +MK++G EPD C +
Sbjct: 1122 VEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTS 1181
Query: 407 KATDLFDGLADKG 445
+A L L D G
Sbjct: 1182 EAIVLLKALRDTG 1194
Score = 57.4 bits (137), Expect = 2e-06
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 35/190 (18%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NS++ +Y G + K ++ +Q G+KP+ T N LI + + ++
Sbjct: 954 LSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMH 1013
Query: 218 EIRDSGLNPDVVTYNTLIG------------------LSAE-----------------NG 292
E+R GL P + TY +LI LS E +G
Sbjct: 1014 EMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSG 1073
Query: 293 NSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYN 472
N +A ++ MK G EP + T L+ Y G E+A + D L +GL + Y+
Sbjct: 1074 NHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYS 1133
Query: 473 ALLYALARNG 502
+++ A +NG
Sbjct: 1134 SVIDAYLKNG 1143
>ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Populus trichocarpa]
gi|566211778|ref|XP_006372941.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550319588|gb|ERP50737.1| hypothetical protein
POPTR_0017s06420g [Populus trichocarpa]
gi|550319589|gb|ERP50738.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 1465
Score = 149 bits (377), Expect = 3e-34
Identities = 78/170 (45%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + P +V+V+N+MMGVYA+ G ++KVQEL M+ RG +P++V+ N LI AR K
Sbjct: 249 FTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKA 308
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
+ ++L E+R SGL PD++TYNTLI + N EEAV VF DM + EPDL
Sbjct: 309 GEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLW 368
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG G+ KA LF+ L +G PD+ +YN+ LYA AR G V
Sbjct: 369 TYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNV 418
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/154 (33%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNV-STRDVLCEI 223
+N+M+ VY +CG+ K ++L + ++ RG P+ V+ N + A F RE NV +D+ E+
Sbjct: 370 YNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYA-FAREGNVEKVKDICEEM 428
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
G D +TYNT+I + + G ++ A+++++DMK +G PD+ T LI G +
Sbjct: 429 VKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKI 488
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
E+A + + + G+ P TY+AL+ A+ GK
Sbjct: 489 EEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGK 522
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/154 (26%), Positives = 72/154 (46%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+M+ +Y K G D +L M+ G P+++T +LI + K K ++ E+
Sbjct: 440 YNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEML 499
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++G+ P + TY+ LI A+ G EA E F M R+G PD ++ + +
Sbjct: 500 NTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPK 559
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
+A + + G+ P+ Y +L L KV
Sbjct: 560 RAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKV 593
Score = 67.0 bits (162), Expect = 2e-09
Identities = 38/136 (27%), Positives = 67/136 (49%)
Frame = +2
Query: 95 VQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSGLNPDVVTYNTLIG 274
V+ +L M+ G KP++ N ++ + T + I++ GL PD TYN LI
Sbjct: 943 VEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIV 1002
Query: 275 LSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCP 454
+ + +E + + +M+ G EP L T K L++ +G +VE+A +LF+ L G
Sbjct: 1003 MYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKL 1062
Query: 455 DSGTYNALLYALARNG 502
D Y+ ++ +G
Sbjct: 1063 DRSFYHIMMKIYRNSG 1078
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/156 (24%), Positives = 76/156 (48%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NS++ +Y + K ++ ++ G++P+ T NILI + + ++
Sbjct: 959 LSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMD 1018
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E+R GL P + TY +L+ + E+A E+F++++ G + D ++ Y N G
Sbjct: 1019 EMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSG 1078
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA LF + D G+ P T + L+ + +G+
Sbjct: 1079 SHSKAQRLFSMMKDAGVEPTIATMHLLMVSYGSSGQ 1114
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/133 (24%), Positives = 60/133 (45%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
++ MM +Y G + K Q L M+ G++P I T+++L+ + + VL ++
Sbjct: 1067 YHIMMKIYRNSGSHSKAQRLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK 1126
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++ N + Y+++I NG+ ++ + +K G EPD C I
Sbjct: 1127 ETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTS 1186
Query: 407 KATDLFDGLADKG 445
+A L + L D G
Sbjct: 1187 EAILLLNALRDTG 1199
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/149 (23%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNIL--ITARFKREKNVSTRDVLCEIRD 229
M+ +A+ G +V+++ H M+ G P++ ++ + R K+ ++V +L E+ +
Sbjct: 895 MLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEA--MLSEMEE 952
Query: 230 SGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEK 409
+G PD+ +N+++ + + + +++Q +K +G EPD T LI Y ++
Sbjct: 953 AGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKE 1012
Query: 410 ATDLFDGLADKGLCPDSGTYNALLYALAR 496
L D + GL P TY +L+ + +
Sbjct: 1013 GLVLMDEMRTVGLEPKLDTYKSLVASFGK 1041
>ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1496
Score = 149 bits (377), Expect = 3e-34
Identities = 79/166 (47%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
+ + PE +VQV+N+MMGVYA+ G + +VQELL+ M+ RG +P++V+LN LI AR +
Sbjct: 253 YTRAEPEIGNTVQVYNAMMGVYARNGRFKRVQELLNLMRERGCEPDLVSLNTLINARLRS 312
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
V ++L E+R SGL PD++TYNTLI A N +EAV+V+ DM+ + +PDL
Sbjct: 313 GPMVPNLAIELLNEVRRSGLRPDIITYNTLISGCARESNLDEAVKVYADMEAHNCQPDLW 372
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALAR 496
T +IS YG G KA LF L KG PD+ TYN+LLYA AR
Sbjct: 373 TYNAMISVYGRCGQSSKAEQLFKELESKGFFPDAVTYNSLLYAFAR 418
Score = 96.3 bits (238), Expect = 4e-18
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Frame = +2
Query: 11 NSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREK 190
N +P+ T +N+M+ VY +CG K ++L ++ +G P+ VT N L+ A F RE
Sbjct: 366 NCQPDLWT----YNAMISVYGRCGQSSKAEQLFKELESKGFFPDAVTYNSLLYA-FAREL 420
Query: 191 NV-STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCK 367
N+ RD+ ++ G D +TYNT+I + + G ++A +V+QDMK G PD T
Sbjct: 421 NIEKVRDICEDMVKMGFAKDEMTYNTIIHMYGKQGQHDQAQQVYQDMKMLGRIPDAVTYT 480
Query: 368 CLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
LI G + +A ++ + D G+ P TY+AL+ A+ GK
Sbjct: 481 VLIDSLGKENKITEAANVMSEMLDSGVKPTLRTYSALMCGYAKAGK 526
Score = 81.6 bits (200), Expect = 1e-13
Identities = 46/154 (29%), Positives = 77/154 (50%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G +D+ Q++ M++ G P+ VT +LI + K K +V+ E+
Sbjct: 444 YNTIIHMYGKQGQHDQAQQVYQDMKMLGRIPDAVTYTVLIDSLGKENKITEAANVMSEML 503
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
DSG+ P + TY+ L+ A+ G EA E F M R+G PD L+ + +
Sbjct: 504 DSGVKPTLRTYSALMCGYAKAGKQVEAQETFDCMIRSGIRPDHLAYSVLLDIFLRSNETK 563
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
KA L+ + G PD+ Y +L L K+
Sbjct: 564 KAMTLYQEMLHDGFMPDNALYEVMLRVLGSENKL 597
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/136 (30%), Positives = 70/136 (51%)
Frame = +2
Query: 95 VQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSGLNPDVVTYNTLIG 274
V+ ++ M+ G KP++ N ++ E T +V I+++ L PD TYNTLI
Sbjct: 948 VEAMVSEMEEAGFKPDLSIWNCMLKLYAGVEDYKKTVNVYQRIKEAELQPDEDTYNTLII 1007
Query: 275 LSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCP 454
+ + EE + + +M+R G EP L T K LIS +G ++++A +LF+ L G
Sbjct: 1008 MYCRDRRPEEGLSLMHEMRRQGLEPKLNTYKSLISAFGKQQLLDQAEELFEELRSSGCKL 1067
Query: 455 DSGTYNALLYALARNG 502
D Y+ ++ +G
Sbjct: 1068 DRSFYHTMMKLYRNSG 1083
Score = 67.4 bits (163), Expect = 2e-09
Identities = 43/160 (26%), Positives = 79/160 (49%)
Frame = +2
Query: 23 ETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVST 202
E +N+++ +Y + ++ L+H M+ +G++P + T LI+A K++
Sbjct: 994 ELQPDEDTYNTLIIMYCRDRRPEEGLSLMHEMRRQGLEPKLNTYKSLISAFGKQQLLDQA 1053
Query: 203 RDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISC 382
++ E+R SG D Y+T++ L +GN +A + MK G EP+ T L+
Sbjct: 1054 EELFEELRSSGCKLDRSFYHTMMKLYRNSGNHAKAEMLLSVMKEAGIEPNFATMHLLMVS 1113
Query: 383 YGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
YG+ G E+A + D L + Y++++ A RNG
Sbjct: 1114 YGSSGQPEEAEKVLDNLKVTDSYLGTLPYSSVIDAYLRNG 1153
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/163 (20%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Frame = +2
Query: 14 SRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKN 193
+R S +V+ N ++ G D++ L+ +Q G K + ++ +++ A F R N
Sbjct: 851 TRDGPSPTVESVNGLLQALIVDGRLDEIYVLIQELQDMGFKISKSSILLMLEA-FARAGN 909
Query: 194 V-STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKC 370
+ + + ++ +G P + ++ +I L ++ + + +M+ G++PDL C
Sbjct: 910 IFEVKKIYHGMKAAGYFPTMNSFRIMIKLLSKRKQVRDVEAMVSEMEEAGFKPDLSIWNC 969
Query: 371 LISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARN 499
++ Y + +K +++ + + L PD TYN L+ R+
Sbjct: 970 MLKLYAGVEDYKKTVNVYQRIKEAELQPDEDTYNTLIIMYCRD 1012
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/156 (23%), Positives = 74/156 (47%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + N M+ +YA Y K + ++ ++P+ T N LI + + ++
Sbjct: 964 LSIWNCMLKLYAGVEDYKKTVNVYQRIKEAELQPDEDTYNTLIIMYCRDRRPEEGLSLMH 1023
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E+R GL P + TY +LI + ++A E+F++++ +G + D ++ Y N G
Sbjct: 1024 EMRRQGLEPKLNTYKSLISAFGKQQLLDQAEELFEELRSSGCKLDRSFYHTMMKLYRNSG 1083
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA L + + G+ P+ T + L+ + +G+
Sbjct: 1084 NHAKAEMLLSVMKEAGIEPNFATMHLLMVSYGSSGQ 1119
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/133 (24%), Positives = 61/133 (45%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+++MM +Y G + K + LL M+ GI+PN T+++L+ + + VL ++
Sbjct: 1072 YHTMMKLYRNSGNHAKAEMLLSVMKEAGIEPNFATMHLLMVSYGSSGQPEEAEKVLDNLK 1131
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+ + Y+++I NG+ ++ +MKR+G EPD C I
Sbjct: 1132 VTDSYLGTLPYSSVIDAYLRNGDYNTGIQKLNEMKRDGPEPDHRIWTCFIRAASLSQQTS 1191
Query: 407 KATDLFDGLADKG 445
+ L + L D G
Sbjct: 1192 EVFVLLNALRDAG 1204
>ref|XP_002327945.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 149 bits (377), Expect = 3e-34
Identities = 78/170 (45%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + P +V+V+N+MMGVYA+ G ++KVQEL M+ RG +P++V+ N LI AR K
Sbjct: 245 FTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKA 304
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
+ ++L E+R SGL PD++TYNTLI + N EEAV VF DM + EPDL
Sbjct: 305 GEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLW 364
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG G+ KA LF+ L +G PD+ +YN+ LYA AR G V
Sbjct: 365 TYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNV 414
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/154 (33%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNV-STRDVLCEI 223
+N+M+ VY +CG+ K ++L + ++ RG P+ V+ N + A F RE NV +D+ E+
Sbjct: 366 YNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYA-FAREGNVEKVKDICEEM 424
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
G D +TYNT+I + + G ++ A+++++DMK +G PD+ T LI G +
Sbjct: 425 VKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKI 484
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
E+A + + + G+ P TY+AL+ A+ GK
Sbjct: 485 EEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGK 518
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/154 (26%), Positives = 72/154 (46%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+M+ +Y K G D +L M+ G P+++T +LI + K K ++ E+
Sbjct: 436 YNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEML 495
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++G+ P + TY+ LI A+ G EA E F M R+G PD ++ + +
Sbjct: 496 NTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPK 555
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
+A + + G+ P+ Y +L L KV
Sbjct: 556 RAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKV 589
Score = 67.0 bits (162), Expect = 2e-09
Identities = 38/136 (27%), Positives = 67/136 (49%)
Frame = +2
Query: 95 VQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSGLNPDVVTYNTLIG 274
V+ +L M+ G KP++ N ++ + T + I++ GL PD TYN LI
Sbjct: 939 VEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIV 998
Query: 275 LSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCP 454
+ + +E + + +M+ G EP L T K L++ +G +VE+A +LF+ L G
Sbjct: 999 MYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKL 1058
Query: 455 DSGTYNALLYALARNG 502
D Y+ ++ +G
Sbjct: 1059 DRSFYHIMMKIYRNSG 1074
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/156 (24%), Positives = 77/156 (49%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NS++ +Y + K ++ ++ G++P+ T NILI + + ++
Sbjct: 955 LSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMD 1014
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E+R GL P + TY +L+ + E+A E+F++++ G + D ++ Y N G
Sbjct: 1015 EMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSG 1074
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA LF + D+G+ P T + L+ + +G+
Sbjct: 1075 SHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQ 1110
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/133 (24%), Positives = 60/133 (45%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
++ MM +Y G + K Q L M+ G++P I T+++L+ + + VL ++
Sbjct: 1063 YHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK 1122
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++ N + Y+++I NG+ ++ + +K G EPD C I
Sbjct: 1123 ETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTS 1182
Query: 407 KATDLFDGLADKG 445
+A L + L D G
Sbjct: 1183 EAILLLNALRDTG 1195
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/149 (23%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNIL--ITARFKREKNVSTRDVLCEIRD 229
M+ +A+ G +V+++ H M+ G P++ ++ + R K+ ++V +L E+ +
Sbjct: 891 MLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEA--MLSEMEE 948
Query: 230 SGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEK 409
+G PD+ +N+++ + + + +++Q +K +G EPD T LI Y ++
Sbjct: 949 AGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKE 1008
Query: 410 ATDLFDGLADKGLCPDSGTYNALLYALAR 496
L D + GL P TY +L+ + +
Sbjct: 1009 GLVLMDEMRTVGLEPKLDTYKSLVASFGK 1037
>gb|EMJ07903.1| hypothetical protein PRUPE_ppa023974mg [Prunus persica]
Length = 1353
Score = 149 bits (375), Expect = 5e-34
Identities = 80/166 (48%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + P +VQV+N+MMGVYA+ G ++KVQELL+ M+ RG +P++V+LN LI AR +
Sbjct: 103 FTRAEPGIGNTVQVYNAMMGVYARNGRFNKVQELLNLMRERGCEPDLVSLNTLINARLRS 162
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
V D+L E+R SGL PD++TYNTLI + N EEAV+V+ DM+ + +PDL
Sbjct: 163 GAMVPNLAIDLLNEVRRSGLRPDIITYNTLISGCSRESNLEEAVKVYNDMEAHNCQPDLW 222
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALAR 496
T +IS YG G +A LF L KG PD+ TYN+LLYA AR
Sbjct: 223 TYNAMISVYGRCGESSEAERLFKELESKGFFPDAVTYNSLLYAFAR 268
Score = 91.3 bits (225), Expect = 1e-16
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 1/166 (0%)
Frame = +2
Query: 11 NSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREK 190
N +P+ T +N+M+ VY +CG + + L ++ +G P+ VT N L+ A F RE
Sbjct: 216 NCQPDLWT----YNAMISVYGRCGESSEAERLFKELESKGFFPDAVTYNSLLYA-FAREL 270
Query: 191 NV-STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCK 367
++ RD+ ++ G D +TYNT+I + + G + A ++++DMK G PD T
Sbjct: 271 DIEKVRDIGEDMMKMGFGKDEMTYNTIIHMYGKQGQHDLAFQLYRDMKMLGRTPDAVTYT 330
Query: 368 CLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
LI G + +A ++ + D G+ P TY+AL+ A A+ GK
Sbjct: 331 VLIDSLGKANKITEAANVMSEMLDSGVKPTLRTYSALMCAYAKAGK 376
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/154 (28%), Positives = 75/154 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G +D +L M++ G P+ VT +LI + K K +V+ E+
Sbjct: 294 YNTIIHMYGKQGQHDLAFQLYRDMKMLGRTPDAVTYTVLIDSLGKANKITEAANVMSEML 353
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
DSG+ P + TY+ L+ A+ G EA E F M ++G PD ++ + + +
Sbjct: 354 DSGVKPTLRTYSALMCAYAKAGKQVEAQETFDCMVKSGIRPDHLAYSVILDIFLKVNETK 413
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
KA L+ + G D Y +L L R K+
Sbjct: 414 KAITLYQEMLHDGFKLDHALYGFMLRVLGRENKL 447
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/136 (30%), Positives = 72/136 (52%)
Frame = +2
Query: 95 VQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSGLNPDVVTYNTLIG 274
V+ +++ M+ G KP++ N ++ + T V +I+++ L PD TYNTLI
Sbjct: 798 VEAMVYEMEEAGFKPDLSIWNSMLKLYAGIKDFKKTVKVYQQIQEAVLQPDDDTYNTLII 857
Query: 275 LSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCP 454
+ + EE + + Q+M+R G EP L T K LIS +G ++++A +LF+ L G
Sbjct: 858 MYCRDCRPEEGLSLMQEMRRQGLEPKLDTYKSLISAFGKQKLLDQAEELFEELRSNGCKL 917
Query: 455 DSGTYNALLYALARNG 502
D Y+ ++ +G
Sbjct: 918 DRSFYHTMMKMFRNSG 933
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/152 (26%), Positives = 81/152 (53%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y + ++ L+ M+ +G++P + T LI+A K++ ++ E+R
Sbjct: 852 YNTLIIMYCRDCRPEEGLSLMQEMRRQGLEPKLDTYKSLISAFGKQKLLDQAEELFEELR 911
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+G D Y+T++ + +GN +A +F MK G EP+ T L+ YG+ G +
Sbjct: 912 SNGCKLDRSFYHTMMKMFRNSGNHAKAEMLFTMMKEAGIEPNFATMHLLMVSYGSSGQPQ 971
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+A + D L GL D+ Y++++ A +NG
Sbjct: 972 EAEKVLDNLKVTGLDLDTLPYSSVIGAYLKNG 1003
Score = 60.1 bits (144), Expect = 3e-07
Identities = 35/133 (26%), Positives = 65/133 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+++MM ++ G + K + L M+ GI+PN T+++L+ + + VL ++
Sbjct: 922 YHTMMKMFRNSGNHAKAEMLFTMMKEAGIEPNFATMHLLMVSYGSSGQPQEAEKVLDNLK 981
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+GL+ D + Y+++IG +NG+ ++ +MK G EPD C I
Sbjct: 982 VTGLDLDTLPYSSVIGAYLKNGDYNIGIQKLNEMKEVGLEPDHRIWTCFIRAASLSQHKS 1041
Query: 407 KATDLFDGLADKG 445
+A L + L D G
Sbjct: 1042 EAIILLNALRDAG 1054
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/156 (24%), Positives = 77/156 (49%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NSM+ +YA + K ++ +Q ++P+ T N LI + + ++
Sbjct: 814 LSIWNSMLKLYAGIKDFKKTVKVYQQIQEAVLQPDDDTYNTLIIMYCRDCRPEEGLSLMQ 873
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E+R GL P + TY +LI + ++A E+F++++ NG + D ++ + N G
Sbjct: 874 EMRRQGLEPKLDTYKSLISAFGKQKLLDQAEELFEELRSNGCKLDRSFYHTMMKMFRNSG 933
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA LF + + G+ P+ T + L+ + +G+
Sbjct: 934 NHAKAEMLFTMMKEAGIEPNFATMHLLMVSYGSSGQ 969
>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1429
Score = 147 bits (370), Expect = 2e-33
Identities = 81/171 (47%), Positives = 108/171 (63%), Gaps = 3/171 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + +VQV+N+MMGVYA+ G ++KVQ +L M+ RG +P++V+ N LI AR K
Sbjct: 199 FIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKA 258
Query: 185 ---EKNVSTRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDL 355
NV+ ++L E+R SGL PD++TYNTLI + N EEAV+VF DM+ + +PDL
Sbjct: 259 GAMTPNVAI-ELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDL 317
Query: 356 PTCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS YG G KA LF L KG PD+ TYN+LLYA AR G V
Sbjct: 318 WTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNV 368
Score = 87.4 bits (215), Expect = 2e-15
Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC-EI 223
+N+M+ VY +CG K ++L ++ +G P+ VT N L+ A F RE NV +C E+
Sbjct: 320 YNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYA-FAREGNVDKVKEICNEM 378
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
G D +TYNT+I + + G A+++++DMK +G PD T LI G +
Sbjct: 379 VQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKM 438
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
+A ++ + + G+ P TY+AL+ AR G+
Sbjct: 439 VEAANVMSEMLNIGVKPTLRTYSALICGYARAGQ 472
Score = 78.6 bits (192), Expect = 8e-13
Identities = 47/154 (30%), Positives = 75/154 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G + +L M+L G P+ +T +LI + K K V +V+ E+
Sbjct: 390 YNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEML 449
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+ G+ P + TY+ LI A G EA E F M+R+G PD ++ +
Sbjct: 450 NIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEAT 509
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
KA L+ + G+ PD Y A+L L R KV
Sbjct: 510 KAMMLYREMVRDGITPDPTVYGAMLRNLGRENKV 543
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/156 (27%), Positives = 76/156 (48%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ M+G+ K V+ ++ M+ G +P++ N ++ + T +
Sbjct: 874 TMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIY 933
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
I++ GL PD TYNTLI + + EE + +M+R G EP L T K LI+ +G
Sbjct: 934 QRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQ 993
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+V A +LF+ L KG D Y+ ++ +G
Sbjct: 994 QLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSG 1029
Score = 61.2 bits (147), Expect = 1e-07
Identities = 37/151 (24%), Positives = 76/151 (50%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y + ++ L+H M+ G++P + T LI A K++ V ++ E+
Sbjct: 948 YNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELL 1007
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
G D Y+ ++ + +GN +A ++ MK G EP + T L+ YG+ G +
Sbjct: 1008 SKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQ 1067
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARN 499
+A + L + GL + Y++++ A +N
Sbjct: 1068 EAEKVLTNLKEMGLSLSTLPYSSVIDAYLKN 1098
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/133 (24%), Positives = 62/133 (46%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
++ MM +Y G + K ++LL M+ G++P I T+++L+ + + VL ++
Sbjct: 1018 YHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLK 1077
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+ GL+ + Y+++I +N + ++ +MK+ G EPD C I
Sbjct: 1078 EMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHTH 1137
Query: 407 KATDLFDGLADKG 445
A L L D G
Sbjct: 1138 DAILLLQALQDSG 1150
Score = 57.0 bits (136), Expect = 3e-06
Identities = 40/163 (24%), Positives = 75/163 (46%)
Frame = +2
Query: 17 RPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNV 196
RP+ S + NSM+ +Y + K ++ ++ G++P+ T N LI + +
Sbjct: 907 RPDLS----IWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPE 962
Query: 197 STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLI 376
++ E+R GL P + TY +LI + +A E+F+++ G + D ++
Sbjct: 963 EGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMM 1022
Query: 377 SCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
Y N G KA L + D G+ P T + L+ + +G+
Sbjct: 1023 KIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQ 1065
>ref|XP_006590462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1487
Score = 144 bits (363), Expect = 1e-32
Identities = 78/169 (46%), Positives = 106/169 (62%), Gaps = 3/169 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + +VQV+N+MMGVYA+ G + KV+ELL M+ RG P++V+ N LI AR K
Sbjct: 238 FARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKS 297
Query: 185 ---EKNVSTRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDL 355
E N++ + +L E+R SG+ PD++TYNTLI + N EEAV VF DM+ + +PDL
Sbjct: 298 GAMEPNLALQ-LLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDL 356
Query: 356 PTCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
T +IS YG KA +LF L KG PD+ TYN+LLYA +R G
Sbjct: 357 WTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREG 405
Score = 101 bits (251), Expect = 1e-19
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNV-STRDVLCEI 223
+N+M+ VY +C K +EL ++ +G P+ VT N L+ A F RE N RD+ E+
Sbjct: 359 YNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYA-FSREGNTEKVRDICEEM 417
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
G D +TYNT+I + + G ++A+++++DMK +G PD T LI G V
Sbjct: 418 VKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKV 477
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
E+A ++ + D G+ P TY+AL+ A A+ GK
Sbjct: 478 EEAANVMSEMLDAGVKPTLHTYSALICAYAKAGK 511
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/150 (30%), Positives = 82/150 (54%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G +D+ ++ M+ G P+ VT +LI + K K +V+ E+
Sbjct: 429 YNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEML 488
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D+G+ P + TY+ LI A+ G EEA E F M+R+G +PD ++ + ++
Sbjct: 489 DAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMK 548
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALAR 496
KA L+ + +G PD+G Y +++AL R
Sbjct: 549 KAMGLYHEMIREGFTPDNGLYEVMMHALVR 578
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/145 (29%), Positives = 73/145 (50%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+NS++ +++ G +KV+++ M RG + +T N +I K+ ++ + +++
Sbjct: 394 YNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMK 453
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
SG NPD VTY LI + EEA V +M G +P L T LI Y G E
Sbjct: 454 SSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKRE 513
Query: 407 KATDLFDGLADKGLCPDSGTYNALL 481
+A + F+ + G+ PD Y+ +L
Sbjct: 514 EAEETFNCMRRSGIKPDRLAYSVML 538
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/156 (27%), Positives = 74/156 (47%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ V+ M+ + KC V+ +L M+ G +P++ N ++ E S +
Sbjct: 913 TMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIY 972
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
+I+D+ L PD TYNTLI + + EE + M+ G EP L T + LI+ +
Sbjct: 973 QKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQ 1032
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
M E+A +LF+ L G D Y+ ++ +G
Sbjct: 1033 RMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSG 1068
Score = 62.4 bits (150), Expect = 6e-08
Identities = 37/154 (24%), Positives = 77/154 (50%)
Frame = +2
Query: 41 QVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCE 220
+ +N+++ +Y + ++ L++ M+ G++P + T LITA K+ ++ E
Sbjct: 985 ETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEE 1044
Query: 221 IRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGM 400
+R +G D Y+ ++ +G+ +A + MK +G EP + T L+ YG G
Sbjct: 1045 LRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQ 1104
Query: 401 VEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
E+A ++ L G+ D+ Y++++ A + G
Sbjct: 1105 PEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKG 1138
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/133 (27%), Positives = 64/133 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
++ MM Y G + K + LL M+ GI+P I T+++L+ + K + +VL +R
Sbjct: 1057 YHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLR 1116
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+G+ D + Y+++I + G+ + +E +MK G EPD C I
Sbjct: 1117 TTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTN 1176
Query: 407 KATDLFDGLADKG 445
+A L + L D G
Sbjct: 1177 EAIVLLNALQDAG 1189
Score = 58.9 bits (141), Expect = 7e-07
Identities = 37/156 (23%), Positives = 76/156 (48%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+Q+ NS++ +Y + + + +Q +KP+ T N LI + + ++
Sbjct: 949 LQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMN 1008
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
++R GL P + TY +LI + E+A E+F++++ NGY+ D ++ Y G
Sbjct: 1009 KMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSG 1068
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
KA +L + + G+ P T + L+ + ++G+
Sbjct: 1069 DHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQ 1104
>ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 1277
Score = 144 bits (362), Expect = 2e-32
Identities = 76/170 (44%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + +VQV+NSMMGVYA+ G + +VQ+LL M RGI+P++V+ N LI AR K
Sbjct: 248 FMRAEQSIGNTVQVYNSMMGVYARNGRFSRVQQLLELMHERGIEPDLVSFNTLINARLKS 307
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
++L E+R SG PD++TYNTLI + N EEAV+VF DM+ + +PDL
Sbjct: 308 GPMTPNLAIELLDEVRSSGTQPDIITYNTLISACSRESNVEEAVQVFNDMESHRCQPDLW 367
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS +G GM +A LF+ L G PD+ TYN+LL+A AR G +
Sbjct: 368 TYNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTYNSLLHAFARQGNI 417
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC-EI 223
+N+M+ V+ +CG+ + L + ++ G P+ VT N L+ A F R+ N+ +C E+
Sbjct: 369 YNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTYNSLLHA-FARQGNIEKVKEICEEM 427
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
+ G D +TYNT+I + + G + A++V+ DM +G PD+ T LI G +
Sbjct: 428 VNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYNDMTSSGRSPDVITYTILIDSLGKDNKM 487
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
+A+ + + + G+ P TY+AL+ A+ GK
Sbjct: 488 AEASKVMSEMLNAGIKPTVRTYSALICGYAKAGK 521
Score = 73.2 bits (178), Expect = 3e-11
Identities = 45/153 (29%), Positives = 74/153 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+NS++ +A+ G +KV+E+ M G + +T N +I K+ ++ V ++
Sbjct: 404 YNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYNDMT 463
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
SG +PDV+TY LI ++ EA +V +M G +P + T LI Y G
Sbjct: 464 SSGRSPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVRTYSALICGYAKAGKRV 523
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
A D+FD + G+ PD Y +L R G+
Sbjct: 524 DAEDMFDCMVRSGIHPDHLAYTVMLDMNLRFGE 556
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G +D ++ + M G P+++T ILI + K K V+ E+
Sbjct: 439 YNTIIDMYGKQGRHDLALQVYNDMTSSGRSPDVITYTILIDSLGKDNKMAEASKVMSEML 498
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++G+ P V TY+ LI A+ G +A ++F M R+G PD ++ G +
Sbjct: 499 NAGIKPTVRTYSALICGYAKAGKRVDAEDMFDCMVRSGIHPDHLAYTVMLDMNLRFGETK 558
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALAR 496
KA L+ + G P+ Y +L +L R
Sbjct: 559 KAMLLYHDMVRNGFTPELALYEFMLRSLGR 588
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/156 (25%), Positives = 80/156 (51%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ ++G+ ++ + +L M+ G KP++ N ++ + E T +
Sbjct: 923 TMHLYRVIIGLLSRTKQVRDAEAMLSEMEEAGFKPDLSIWNSMLKLYTRIEDFKKTVHIY 982
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
I+++GL PD+ TYNTLI + + E++ + +MKR G P+ T K LI+ +
Sbjct: 983 QRIQEAGLKPDLDTYNTLIIMYCRDRRPHESLLLVNEMKRLGLFPERDTYKSLIAAFCKE 1042
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
M+E+A +LF+ L +G D Y+ ++ +G
Sbjct: 1043 LMLEQAEELFESLRSEGHNLDRSFYHLMMKMYRSSG 1078
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/155 (23%), Positives = 75/155 (48%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NSM+ +Y + + K + +Q G+KP++ T N LI + + + ++
Sbjct: 959 LSIWNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTYNTLIIMYCRDRRPHESLLLVN 1018
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E++ GL P+ TY +LI + E+A E+F+ ++ G+ D ++ Y + G
Sbjct: 1019 EMKRLGLFPERDTYKSLIAAFCKELMLEQAEELFESLRSEGHNLDRSFYHLMMKMYRSSG 1078
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
KA L + + + G+ P T + L+ + +G
Sbjct: 1079 NHSKAEKLIEKMKESGIEPSDATMHLLMTSYGTSG 1113
Score = 61.6 bits (148), Expect = 1e-07
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 35/186 (18%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITA------------------ 172
+N+++ YA G Y+K + + +TM G P + T+N L+ A
Sbjct: 822 YNALIQAYALSGFYEKARAVFNTMMRNGPSPTVDTINNLMQALIVDGRLNELYVLIQELQ 881
Query: 173 ----------------RFKREKNV-STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSE 301
F + NV + + +R +G P + Y +IGL +
Sbjct: 882 DMGFKISKSSILLMLEAFAQAGNVFEVKKIYHGMRAAGYLPTMHLYRVIIGLLSRTKQVR 941
Query: 302 EAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALL 481
+A + +M+ G++PDL ++ Y I +K ++ + + GL PD TYN L+
Sbjct: 942 DAEAMLSEMEEAGFKPDLSIWNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTYNTLI 1001
Query: 482 YALARN 499
R+
Sbjct: 1002 IMYCRD 1007
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/147 (23%), Positives = 73/147 (49%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSG 235
M+ +A+ G +V+++ H M+ G P + ++I + ++ +L E+ ++G
Sbjct: 895 MLEAFAQAGNVFEVKKIYHGMRAAGYLPTMHLYRVIIGLLSRTKQVRDAEAMLSEMEEAG 954
Query: 236 LNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKAT 415
PD+ +N+++ L + ++ V ++Q ++ G +PDL T LI Y ++
Sbjct: 955 FKPDLSIWNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTYNTLIIMYCRDRRPHESL 1014
Query: 416 DLFDGLADKGLCPDSGTYNALLYALAR 496
L + + GL P+ TY +L+ A +
Sbjct: 1015 LLVNEMKRLGLFPERDTYKSLIAAFCK 1041
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +2
Query: 92 KVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL-CEIRDSGLNPDVVTYNTL 268
+ +++ M GIKP + T + LI K K V D+ C +R SG++PD + Y +
Sbjct: 489 EASKVMSEMLNAGIKPTVRTYSALICGYAKAGKRVDAEDMFDCMVR-SGIHPDHLAYTVM 547
Query: 269 IGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKG 445
+ ++ G +++A+ ++ DM RNG+ P+L + ++ G E + L + G
Sbjct: 548 LDMNLRFGETKKAMLLYHDMVRNGFTPELALYEFMLRSLGRANEEENIQIVIKDLKELG 606
>ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1476
Score = 144 bits (362), Expect = 2e-32
Identities = 76/170 (44%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Frame = +2
Query: 5 FQNSRPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKR 184
F + +VQV+NSMMGVYA+ G + +VQ+LL M RGI+P++V+ N LI AR K
Sbjct: 248 FMRAEQSIGNTVQVYNSMMGVYARNGRFSRVQQLLELMHERGIEPDLVSFNTLINARLKS 307
Query: 185 EKNVSTR--DVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLP 358
++L E+R SG PD++TYNTLI + N EEAV+VF DM+ + +PDL
Sbjct: 308 GPMTPNLAIELLDEVRSSGTQPDIITYNTLISACSRESNVEEAVQVFNDMESHRCQPDLW 367
Query: 359 TCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
T +IS +G GM +A LF+ L G PD+ TYN+LL+A AR G +
Sbjct: 368 TYNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTYNSLLHAFARQGNI 417
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC-EI 223
+N+M+ V+ +CG+ + L + ++ G P+ VT N L+ A F R+ N+ +C E+
Sbjct: 369 YNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTYNSLLHA-FARQGNIEKVKEICEEM 427
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
+ G D +TYNT+I + + G + A++V+ DM +G PD+ T LI G +
Sbjct: 428 VNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYNDMTSSGRSPDVITYTILIDSLGKDNKM 487
Query: 404 EKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
+A+ + + + G+ P TY+AL+ A+ GK
Sbjct: 488 AEASKVMSEMLNAGIKPTVRTYSALICGYAKAGK 521
Score = 73.2 bits (178), Expect = 3e-11
Identities = 45/153 (29%), Positives = 74/153 (48%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+NS++ +A+ G +KV+E+ M G + +T N +I K+ ++ V ++
Sbjct: 404 YNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYNDMT 463
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
SG +PDV+TY LI ++ EA +V +M G +P + T LI Y G
Sbjct: 464 SSGRSPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVRTYSALICGYAKAGKRV 523
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
A D+FD + G+ PD Y +L R G+
Sbjct: 524 DAEDMFDCMVRSGIHPDHLAYTVMLDMNLRFGE 556
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y K G +D ++ + M G P+++T ILI + K K V+ E+
Sbjct: 439 YNTIIDMYGKQGRHDLALQVYNDMTSSGRSPDVITYTILIDSLGKDNKMAEASKVMSEML 498
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
++G+ P V TY+ LI A+ G +A ++F M R+G PD ++ G +
Sbjct: 499 NAGIKPTVRTYSALICGYAKAGKRVDAEDMFDCMVRSGIHPDHLAYTVMLDMNLRFGETK 558
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALAR 496
KA L+ + G P+ Y +L +L R
Sbjct: 559 KAMLLYHDMVRNGFTPELALYEFMLRSLGR 588
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/156 (25%), Positives = 80/156 (51%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ ++G+ ++ + +L M+ G KP++ N ++ + E T +
Sbjct: 923 TMHLYRVIIGLLSRTKQVRDAEAMLSEMEEAGFKPDLSIWNSMLKLYTRIEDFKKTVHIY 982
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
I+++GL PD+ TYNTLI + + E++ + +MKR G P+ T K LI+ +
Sbjct: 983 QRIQEAGLKPDLDTYNTLIIMYCRDRRPHESLLLVNEMKRLGLFPERDTYKSLIAAFCKE 1042
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
M+E+A +LF+ L +G D Y+ ++ +G
Sbjct: 1043 LMLEQAEELFESLRSEGHNLDRSFYHLMMKMYRSSG 1078
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/155 (23%), Positives = 75/155 (48%)
Frame = +2
Query: 38 VQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLC 217
+ + NSM+ +Y + + K + +Q G+KP++ T N LI + + + ++
Sbjct: 959 LSIWNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTYNTLIIMYCRDRRPHESLLLVN 1018
Query: 218 EIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIG 397
E++ GL P+ TY +LI + E+A E+F+ ++ G+ D ++ Y + G
Sbjct: 1019 EMKRLGLFPERDTYKSLIAAFCKELMLEQAEELFESLRSEGHNLDRSFYHLMMKMYRSSG 1078
Query: 398 MVEKATDLFDGLADKGLCPDSGTYNALLYALARNG 502
KA L + + + G+ P T + L+ + +G
Sbjct: 1079 NHSKAEKLIEKMKESGIEPSDATMHLLMTSYGTSG 1113
Score = 61.6 bits (148), Expect = 1e-07
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 35/186 (18%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITA------------------ 172
+N+++ YA G Y+K + + +TM G P + T+N L+ A
Sbjct: 822 YNALIQAYALSGFYEKARAVFNTMMRNGPSPTVDTINNLMQALIVDGRLNELYVLIQELQ 881
Query: 173 ----------------RFKREKNV-STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSE 301
F + NV + + +R +G P + Y +IGL +
Sbjct: 882 DMGFKISKSSILLMLEAFAQAGNVFEVKKIYHGMRAAGYLPTMHLYRVIIGLLSRTKQVR 941
Query: 302 EAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALL 481
+A + +M+ G++PDL ++ Y I +K ++ + + GL PD TYN L+
Sbjct: 942 DAEAMLSEMEEAGFKPDLSIWNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTYNTLI 1001
Query: 482 YALARN 499
R+
Sbjct: 1002 IMYCRD 1007
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/147 (23%), Positives = 73/147 (49%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSG 235
M+ +A+ G +V+++ H M+ G P + ++I + ++ +L E+ ++G
Sbjct: 895 MLEAFAQAGNVFEVKKIYHGMRAAGYLPTMHLYRVIIGLLSRTKQVRDAEAMLSEMEEAG 954
Query: 236 LNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKAT 415
PD+ +N+++ L + ++ V ++Q ++ G +PDL T LI Y ++
Sbjct: 955 FKPDLSIWNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTYNTLIIMYCRDRRPHESL 1014
Query: 416 DLFDGLADKGLCPDSGTYNALLYALAR 496
L + + GL P+ TY +L+ A +
Sbjct: 1015 LLVNEMKRLGLFPERDTYKSLIAAFCK 1041
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +2
Query: 92 KVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL-CEIRDSGLNPDVVTYNTL 268
+ +++ M GIKP + T + LI K K V D+ C +R SG++PD + Y +
Sbjct: 489 EASKVMSEMLNAGIKPTVRTYSALICGYAKAGKRVDAEDMFDCMVR-SGIHPDHLAYTVM 547
Query: 269 IGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKATDLFDGLADKG 445
+ ++ G +++A+ ++ DM RNG+ P+L + ++ G E + L + G
Sbjct: 548 LDMNLRFGETKKAMLLYHDMVRNGFTPELALYEFMLRSLGRANEEENIQIVIKDLKELG 606
>tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 144 bits (362), Expect = 2e-32
Identities = 77/160 (48%), Positives = 104/160 (65%), Gaps = 2/160 (1%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVS--TRD 208
+VQV N+MMGVYA+ G +D ++LL TM RGI P++V+ N LI AR K + D
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 209 VLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYG 388
+L E+R SGL PDV+TYNTLI +++ N E+AV VF+DM + PDL T ++S +G
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHG 339
Query: 389 NIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
G E+A LF L +KG PD+ TYN+LLYA A+ G V
Sbjct: 340 RCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNV 379
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Frame = +2
Query: 23 ETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVST 202
E + +N+M+ V+ +CG ++ + L + +G P+ +T N L+ A F +E NV
Sbjct: 323 ECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYA-FAKEGNVDK 381
Query: 203 RDVLCE-IRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLIS 379
+ CE + +G + +TYNT+I + + G + AV ++ +M+ G PD T +I
Sbjct: 382 VEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMID 441
Query: 380 CYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
G + + +A + + + D GL P ++AL+ A A+ G+
Sbjct: 442 SLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGR 483
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/153 (28%), Positives = 71/153 (46%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+M+ +Y K G D L M+ G P+ VT ++I + K + VL ++
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT 460
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D+GL P ++ ++ LI A+ G +A F M +G +PD ++ + G E
Sbjct: 461 DAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTE 520
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
K L+ + + PD Y LL ALA+ K
Sbjct: 521 KMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDK 553
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/164 (21%), Positives = 79/164 (48%)
Frame = +2
Query: 17 RPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNV 196
RP+ T +N+++ ++ + + M +P++ T N +++ + K
Sbjct: 290 RPDVIT----YNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAE 345
Query: 197 STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLI 376
+ E+ + G PD +TYN+L+ A+ GN ++ + + + G++ + T +I
Sbjct: 346 EAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMI 405
Query: 377 SCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
YG +G ++ A L+D + G PD+ TY ++ +L + ++
Sbjct: 406 HMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRI 449
Score = 64.3 bits (155), Expect = 2e-08
Identities = 38/134 (28%), Positives = 61/134 (45%)
Frame = +2
Query: 44 VHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEI 223
+++ MM +Y G + K + LL M+ GI+P I T++IL+T+ + +VL +
Sbjct: 1027 IYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNL 1086
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
+ S L + Y+T+ +NG+ +MKR+G EPD C I
Sbjct: 1087 KSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQT 1146
Query: 404 EKATDLFDGLADKG 445
A L L D G
Sbjct: 1147 ADAILLLKSLQDCG 1160
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/147 (24%), Positives = 67/147 (45%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSG 235
++ +AK G +V ++ + M+ G PN+ +I+ + ++ E+ +G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 236 LNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKAT 415
PD+ N L+ + GN + +V++ + G EPD T LI Y E+
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 416 DLFDGLADKGLCPDSGTYNALLYALAR 496
L + + +GL P +Y +LL A A+
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAK 1002
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/149 (24%), Positives = 69/149 (46%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ SM+ + + V+ ++ M+ G KP++ LN L+ T V
Sbjct: 884 NMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVY 943
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
I ++GL PD TYNTLI + + EE + +M + G P L + K L++
Sbjct: 944 RSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKA 1003
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALL 481
+ E+A +F+ + K + Y+ ++
Sbjct: 1004 ELREQADQIFEEMRSKSYQLNRSIYHMMM 1032
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/152 (23%), Positives = 69/152 (45%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y + ++ LL+ M RG+ P + + L+ A K E + E+R
Sbjct: 958 YNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR 1017
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+ Y+ ++ + GN +A + MK +G EP + T L++ YG G
Sbjct: 1018 SKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPR 1077
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+A ++ + L L + Y+ + A +NG
Sbjct: 1078 EAENVLNNLKSSSLEVSTLPYSTVFDAYLKNG 1109
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Frame = +2
Query: 50 NSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRD 229
N MM G D++ ++ +Q K + T+ +L+ A K + ++
Sbjct: 819 NGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKA 878
Query: 230 SGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEK 409
+G P++ Y ++I L + + + +M+ G++PDL L++ Y G ++
Sbjct: 879 AGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDR 938
Query: 410 ATDLFDGLADKGLCPDSGTYNALLYALARN 499
T ++ + + GL PD TYN L+ R+
Sbjct: 939 TTQVYRSILEAGLEPDEDTYNTLIVMYCRS 968
>gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 144 bits (362), Expect = 2e-32
Identities = 77/160 (48%), Positives = 104/160 (65%), Gaps = 2/160 (1%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVS--TRD 208
+VQV N+MMGVYA+ G +D ++LL TM RGI P++V+ N LI AR K + D
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 209 VLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYG 388
+L E+R SGL PDV+TYNTLI +++ N E+AV VF+DM + PDL T ++S +G
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHG 339
Query: 389 NIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
G E+A LF L +KG PD+ TYN+LLYA A+ G V
Sbjct: 340 RCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNV 379
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Frame = +2
Query: 23 ETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVST 202
E + +N+M+ V+ +CG ++ + L + +G P+ +T N L+ A F +E NV
Sbjct: 323 ECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYA-FAKEGNVDK 381
Query: 203 RDVLCE-IRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLIS 379
+ CE + +G + +TYNT+I + + G + AV ++ +M+ G PD T +I
Sbjct: 382 VEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMID 441
Query: 380 CYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
G + + +A + + + D GL P ++AL+ A A+ G+
Sbjct: 442 SLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGR 483
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/153 (28%), Positives = 71/153 (46%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+M+ +Y K G D L M+ G P+ VT ++I + K + VL ++
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT 460
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
D+GL P ++ ++ LI A+ G +A F M +G +PD ++ + G E
Sbjct: 461 DAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTE 520
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNGK 505
K L+ + + PD Y LL ALA+ K
Sbjct: 521 KMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDK 553
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/164 (21%), Positives = 79/164 (48%)
Frame = +2
Query: 17 RPETSTSVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNV 196
RP+ T +N+++ ++ + + M +P++ T N +++ + K
Sbjct: 290 RPDVIT----YNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAE 345
Query: 197 STRDVLCEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLI 376
+ E+ + G PD +TYN+L+ A+ GN ++ + + + G++ + T +I
Sbjct: 346 EAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMI 405
Query: 377 SCYGNIGMVEKATDLFDGLADKGLCPDSGTYNALLYALARNGKV 508
YG +G ++ A L+D + G PD+ TY ++ +L + ++
Sbjct: 406 HMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRI 449
Score = 64.3 bits (155), Expect = 2e-08
Identities = 38/134 (28%), Positives = 61/134 (45%)
Frame = +2
Query: 44 VHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEI 223
+++ MM +Y G + K + LL M+ GI+P I T++IL+T+ + +VL +
Sbjct: 1027 IYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNL 1086
Query: 224 RDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMV 403
+ S L + Y+T+ +NG+ +MKR+G EPD C I
Sbjct: 1087 KSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQT 1146
Query: 404 EKATDLFDGLADKG 445
A L L D G
Sbjct: 1147 ADAILLLKSLQDCG 1160
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/147 (24%), Positives = 67/147 (45%)
Frame = +2
Query: 56 MMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRDSG 235
++ +AK G +V ++ + M+ G PN+ +I+ + ++ E+ +G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAG 915
Query: 236 LNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEKAT 415
PD+ N L+ + GN + +V++ + G EPD T LI Y E+
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 416 DLFDGLADKGLCPDSGTYNALLYALAR 496
L + + +GL P +Y +LL A A+
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAK 1002
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/149 (24%), Positives = 69/149 (46%)
Frame = +2
Query: 35 SVQVHNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVL 214
++ ++ SM+ + + V+ ++ M+ G KP++ LN L+ T V
Sbjct: 884 NMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVY 943
Query: 215 CEIRDSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNI 394
I ++GL PD TYNTLI + + EE + +M + G P L + K L++
Sbjct: 944 RSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKA 1003
Query: 395 GMVEKATDLFDGLADKGLCPDSGTYNALL 481
+ E+A +F+ + K + Y+ ++
Sbjct: 1004 ELREQADQIFEEMRSKSYQLNRSIYHMMM 1032
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/152 (23%), Positives = 69/152 (45%)
Frame = +2
Query: 47 HNSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIR 226
+N+++ +Y + ++ LL+ M RG+ P + + L+ A K E + E+R
Sbjct: 958 YNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR 1017
Query: 227 DSGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVE 406
+ Y+ ++ + GN +A + MK +G EP + T L++ YG G
Sbjct: 1018 SKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPR 1077
Query: 407 KATDLFDGLADKGLCPDSGTYNALLYALARNG 502
+A ++ + L L + Y+ + A +NG
Sbjct: 1078 EAENVLNNLKSSSLEVSTLPYSTVFDAYLKNG 1109
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Frame = +2
Query: 50 NSMMGVYAKCGVYDKVQELLHTMQLRGIKPNIVTLNILITARFKREKNVSTRDVLCEIRD 229
N MM G D++ ++ +Q K + T+ +L+ A K + ++
Sbjct: 819 NGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKA 878
Query: 230 SGLNPDVVTYNTLIGLSAENGNSEEAVEVFQDMKRNGYEPDLPTCKCLISCYGNIGMVEK 409
+G P++ Y ++I L + + + +M+ G++PDL L++ Y G ++
Sbjct: 879 AGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDR 938
Query: 410 ATDLFDGLADKGLCPDSGTYNALLYALARN 499
T ++ + + GL PD TYN L+ R+
Sbjct: 939 TTQVYRSILEAGLEPDEDTYNTLIVMYCRS 968