BLASTX nr result
ID: Ephedra27_contig00024101
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00024101
(474 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004235401.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 103 2e-20
ref|XP_006353939.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 102 4e-20
gb|EMT21882.1| RING finger protein 126 [Aegilops tauschii] 102 7e-20
ref|NP_187951.1| RING/U-box superfamily protein [Arabidopsis tha... 101 1e-19
ref|XP_002467049.1| hypothetical protein SORBIDRAFT_01g018800 [S... 101 1e-19
gb|AAR20783.1| At3g13430 [Arabidopsis thaliana] gi|44681454|gb|A... 101 1e-19
gb|EMS63398.1| E3 ubiquitin-protein ligase RING1 [Triticum urartu] 100 2e-19
ref|XP_004982780.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 100 3e-19
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|5... 100 3e-19
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 99 4e-19
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera] 99 4e-19
ref|XP_003574092.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 99 6e-19
ref|XP_006847820.1| hypothetical protein AMTR_s00029p00043520 [A... 98 1e-18
gb|EMT01795.1| RING finger protein 126 [Aegilops tauschii] 98 1e-18
gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 98 1e-18
gb|AFG53307.1| hypothetical protein 0_8445_01, partial [Pinus ta... 97 2e-18
ref|XP_002523963.1| zinc finger protein, putative [Ricinus commu... 97 2e-18
gb|EEC74065.1| hypothetical protein OsI_09075 [Oryza sativa Indi... 97 2e-18
gb|EAZ24742.1| hypothetical protein OsJ_08513 [Oryza sativa Japo... 97 2e-18
dbj|BAJ87106.1| predicted protein [Hordeum vulgare subsp. vulgare] 97 3e-18
>ref|XP_004235401.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Solanum lycopersicum] gi|460379301|ref|XP_004235402.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Solanum lycopersicum]
Length = 383
Score = 103 bits (257), Expect = 2e-20
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = +2
Query: 188 LASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSAS 367
L S+ CAV KD FE+G A+Q+PCKHIYH DCI+PWLELH++CPVCRY+LP D
Sbjct: 215 LDSDSSQCAVCKDTFELGMEAKQIPCKHIYHKDCIMPWLELHNSCPVCRYELPTDDPDYE 274
Query: 368 NASTSNPRNDQANNATSAATSQDSGQNNDG 457
N TS + +N + ++ ++ NN G
Sbjct: 275 NRKTSQQQTANTSNTNTNTSNNNTNNNNTG 304
>ref|XP_006353939.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
tuberosum]
Length = 387
Score = 102 bits (255), Expect = 4e-20
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = +2
Query: 188 LASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSAS 367
L S+ CAV KD FE+G A+Q+PCKHIYH DCI+PWLELH++CPVCRY+LP D
Sbjct: 215 LDSDSSQCAVCKDTFELGMEAKQIPCKHIYHKDCIMPWLELHNSCPVCRYELPTDDPDYE 274
Query: 368 NASTSNPRNDQANNATSAATSQDSGQNNDG 457
N TS + +N + ++ ++ NN G
Sbjct: 275 NRKTSQQQTANTSNTHANTSNNNTNNNNTG 304
>gb|EMT21882.1| RING finger protein 126 [Aegilops tauschii]
Length = 336
Score = 102 bits (253), Expect = 7e-20
Identities = 47/94 (50%), Positives = 60/94 (63%)
Frame = +2
Query: 191 ASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASN 370
A+EG CAV K+ F G+ A+QMPCKHIYH DCIVPWLELH++CP+CR++LP D
Sbjct: 190 AAEGAECAVCKEDFSPGDGAKQMPCKHIYHADCIVPWLELHNSCPICRFELPTDDPDYEG 249
Query: 371 ASTSNPRNDQANNATSAATSQDSGQNNDGSSTPG 472
SNP++ A +AA S SG +G G
Sbjct: 250 NKASNPQS-AVGIAAAAAASGSSGAAEEGGEESG 282
>ref|NP_187951.1| RING/U-box superfamily protein [Arabidopsis thaliana]
gi|79313215|ref|NP_001030687.1| RING/U-box superfamily
protein [Arabidopsis thaliana]
gi|334185314|ref|NP_001189879.1| RING/U-box superfamily
protein [Arabidopsis thaliana]
gi|9280292|dbj|BAB01747.1| unnamed protein product
[Arabidopsis thaliana] gi|332641826|gb|AEE75347.1|
RING/U-box superfamily protein [Arabidopsis thaliana]
gi|332641827|gb|AEE75348.1| RING/U-box superfamily
protein [Arabidopsis thaliana]
gi|332641828|gb|AEE75349.1| RING/U-box superfamily
protein [Arabidopsis thaliana]
Length = 315
Score = 101 bits (251), Expect = 1e-19
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +2
Query: 209 CAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASNASTSNP 388
C+V D FE+G A++MPCKH +H+DC++PWLELHS+CPVCRY LP GDD
Sbjct: 225 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDDEPKTDAETS 284
Query: 389 RNDQANNATSAATSQDSGQNNDGSS 463
RND N S A+ +G + D SS
Sbjct: 285 RNDDNNEDISNASMASNGSSPDSSS 309
>ref|XP_002467049.1| hypothetical protein SORBIDRAFT_01g018800 [Sorghum bicolor]
gi|241920903|gb|EER94047.1| hypothetical protein
SORBIDRAFT_01g018800 [Sorghum bicolor]
Length = 398
Score = 101 bits (251), Expect = 1e-19
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Frame = +2
Query: 191 ASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASN 370
A+EG CAV K+ F G +A+QMPCKHIYH DCIVPWLELH++CP+CR++LP D
Sbjct: 251 AAEGAECAVCKEDFSPGEVAKQMPCKHIYHTDCIVPWLELHNSCPICRFELPTDDPDYEG 310
Query: 371 ASTSNPRNDQANNATSAATSQDS----GQNNDGSSTP 469
SNP A +AA S S GQ + P
Sbjct: 311 RKGSNPPQPAVGIAAAAAASGSSTAADGQMEERQDNP 347
>gb|AAR20783.1| At3g13430 [Arabidopsis thaliana] gi|44681454|gb|AAS47667.1|
At3g13430 [Arabidopsis thaliana]
Length = 315
Score = 101 bits (251), Expect = 1e-19
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +2
Query: 209 CAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASNASTSNP 388
C+V D FE+G A++MPCKH +H+DC++PWLELHS+CPVCRY LP GDD
Sbjct: 225 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDDEPKTDAETS 284
Query: 389 RNDQANNATSAATSQDSGQNNDGSS 463
RND N S A+ +G + D SS
Sbjct: 285 RNDDNNEDISNASMASNGSSPDSSS 309
>gb|EMS63398.1| E3 ubiquitin-protein ligase RING1 [Triticum urartu]
Length = 228
Score = 100 bits (249), Expect = 2e-19
Identities = 47/95 (49%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = +2
Query: 191 ASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASN 370
A+EG CAV K+ F G+ A+QMPCKHIYH DCIVPWLELH++CP+CR++LP D
Sbjct: 80 AAEGAECAVCKEDFSPGDGAKQMPCKHIYHADCIVPWLELHNSCPICRFELPTDDPDYEG 139
Query: 371 ASTSNPRNDQA-NNATSAATSQDSGQNNDGSSTPG 472
SNP++ A +AA S SG +G G
Sbjct: 140 NKASNPQSAVGIAAAAAAAASGSSGAAEEGGEESG 174
>ref|XP_004982780.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 393
Score = 100 bits (248), Expect = 3e-19
Identities = 45/83 (54%), Positives = 56/83 (67%)
Frame = +2
Query: 191 ASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASN 370
A+EG CAV K+ F G +A+QMPCKHIYHNDCIVPWLELH++CP+CR++LP D
Sbjct: 247 AAEGAECAVCKEDFSPGEVAKQMPCKHIYHNDCIVPWLELHNSCPICRFELPTDDPDYEG 306
Query: 371 ASTSNPRNDQANNATSAATSQDS 439
SNP+ A +AA S S
Sbjct: 307 RKASNPQ-PPVGIAAAAAPSGSS 328
>ref|XP_002329726.1| predicted protein [Populus trichocarpa]
gi|566206023|ref|XP_006374275.1| hypothetical protein
POPTR_0015s05600g [Populus trichocarpa]
gi|118486397|gb|ABK95038.1| unknown [Populus
trichocarpa] gi|550322032|gb|ERP52072.1| hypothetical
protein POPTR_0015s05600g [Populus trichocarpa]
Length = 345
Score = 100 bits (248), Expect = 3e-19
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +2
Query: 188 LASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDD--S 361
+ S+ CAV KD FE+G +A+Q+PCKHIYH DCI+PWLELH++CPVCRY+LP D
Sbjct: 193 MQSDSSQCAVCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPVCRYELPTDDQDYE 252
Query: 362 ASNASTSNPRNDQANNATSAATSQDSGQNNDGSS 463
+ SN N ++ S G N+DG++
Sbjct: 253 QRKGNGSNGVNQNVGGGINSGGSISDGDNSDGNA 286
>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
ubiquitin-protein ligase RING1 isoform 2 [Vitis
vinifera]
Length = 369
Score = 99.4 bits (246), Expect = 4e-19
Identities = 42/95 (44%), Positives = 60/95 (63%)
Frame = +2
Query: 179 IKYLASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDD 358
++ L ++ CAV KD FE+ A+QMPCKHIYHNDCI+PWLELH++CPVCRY+LP D
Sbjct: 207 VELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDP 266
Query: 359 SASNASTSNPRNDQANNATSAATSQDSGQNNDGSS 463
+ + N NA + A + + + G++
Sbjct: 267 DYEHRTRGGQVNQTGGNAAAVAAAGAASNSASGAA 301
>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
Length = 371
Score = 99.4 bits (246), Expect = 4e-19
Identities = 42/95 (44%), Positives = 60/95 (63%)
Frame = +2
Query: 179 IKYLASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDD 358
++ L ++ CAV KD FE+ A+QMPCKHIYHNDCI+PWLELH++CPVCRY+LP D
Sbjct: 209 VELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDP 268
Query: 359 SASNASTSNPRNDQANNATSAATSQDSGQNNDGSS 463
+ + N NA + A + + + G++
Sbjct: 269 DYEHRTRGGQVNQTGGNAAAVAAAGAASNSASGAA 303
>ref|XP_003574092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 366
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/94 (50%), Positives = 59/94 (62%)
Frame = +2
Query: 191 ASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASN 370
A+EG CAV K+ F G A+QMPCKHIYH+ CIVPWLELH++CP+CR++LP D
Sbjct: 227 AAEGAECAVCKEDFSPGEGAKQMPCKHIYHDYCIVPWLELHNSCPICRFELPTDDPDYEG 286
Query: 371 ASTSNPRNDQANNATSAATSQDSGQNNDGSSTPG 472
TSNP+ A SAA S +S +G G
Sbjct: 287 NKTSNPQ--PAVGIASAAASGNSSAAEEGREETG 318
>ref|XP_006847820.1| hypothetical protein AMTR_s00029p00043520 [Amborella trichopoda]
gi|548851125|gb|ERN09401.1| hypothetical protein
AMTR_s00029p00043520 [Amborella trichopoda]
Length = 366
Score = 98.2 bits (243), Expect = 1e-18
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +2
Query: 188 LASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSAS 367
L S+ CAV KD FE G+ A+Q+PCKHIYH DCI+PWLELH++CPVCRY+LP D
Sbjct: 187 LNSDTSQCAVCKDAFEEGSFAKQLPCKHIYHGDCILPWLELHNSCPVCRYELPTDDQDYE 246
Query: 368 NASTSNPRNDQANNATSAATSQDS-GQNNDGSSTPG 472
+ R +Q + A +S G + +GS+ G
Sbjct: 247 RRNQGEGRPNQGEGRRNPAGQPESGGDSGEGSAGDG 282
>gb|EMT01795.1| RING finger protein 126 [Aegilops tauschii]
Length = 266
Score = 98.2 bits (243), Expect = 1e-18
Identities = 39/79 (49%), Positives = 59/79 (74%)
Frame = +2
Query: 209 CAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASNASTSNP 388
C V KD FE+G+ AR+MPCKH+YH+DCI+PWLE H++CPVCRY+LP S ++ S S
Sbjct: 165 CPVCKDKFELGSEAREMPCKHLYHSDCILPWLEQHNSCPVCRYELPTQSSSGASCSRSRS 224
Query: 389 RNDQANNATSAATSQDSGQ 445
N ++++S+++ + SG+
Sbjct: 225 TNQNDSSSSSSSSGRTSGR 243
>gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 378
Score = 97.8 bits (242), Expect = 1e-18
Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Frame = +2
Query: 188 LASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDD--S 361
LAS+ CAV KD FE+G A+QMPCKHIYH++CI+PWLELH++CPVCRY+LP D
Sbjct: 212 LASDSSQCAVCKDTFELGEEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYE 271
Query: 362 ASNASTSNPRNDQANNATSAATSQDSGQNN---DGSST 466
N TS P N Q+ A S G N DGS +
Sbjct: 272 QRNRGTSTPAN-QSQAAGGFNISVGGGSINAVGDGSGS 308
>gb|AFG53307.1| hypothetical protein 0_8445_01, partial [Pinus taeda]
gi|383143720|gb|AFG53308.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143721|gb|AFG53309.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143722|gb|AFG53310.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143723|gb|AFG53311.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143724|gb|AFG53312.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143725|gb|AFG53313.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143726|gb|AFG53314.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143727|gb|AFG53315.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143728|gb|AFG53316.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143731|gb|AFG53319.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
gi|383143732|gb|AFG53320.1| hypothetical protein
0_8445_01, partial [Pinus taeda]
Length = 146
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/95 (48%), Positives = 58/95 (61%)
Frame = +2
Query: 188 LASEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSAS 367
L ++ CAV KD FEVG RQMPCKH+YH+ CI+PWLE H++CPVCRY++P D
Sbjct: 10 LVTDSTQCAVCKDEFEVGTEVRQMPCKHMYHSVCILPWLEQHNSCPVCRYEMPTDDVEYE 69
Query: 368 NASTSNPRNDQANNATSAATSQDSGQNNDGSSTPG 472
A +S + N S TS G N DG S+ G
Sbjct: 70 QARSSGQSSHWVRN--SGGTSDGQGGNLDGFSSRG 102
>ref|XP_002523963.1| zinc finger protein, putative [Ricinus communis]
gi|223536690|gb|EEF38331.1| zinc finger protein,
putative [Ricinus communis]
Length = 116
Score = 97.4 bits (241), Expect = 2e-18
Identities = 40/76 (52%), Positives = 50/76 (65%)
Frame = +2
Query: 209 CAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASNASTSNP 388
CAV KD FE G A+QMPCKH+YHNDCIVPWLELH++CPVCRY+LP D + +
Sbjct: 4 CAVCKDEFEKGAEAKQMPCKHVYHNDCIVPWLELHNSCPVCRYELPTDDSDYESRTRGGA 63
Query: 389 RNDQANNATSAATSQD 436
Q +N + T +
Sbjct: 64 EGGQGSNEVAGTTGDN 79
>gb|EEC74065.1| hypothetical protein OsI_09075 [Oryza sativa Indica Group]
Length = 327
Score = 97.1 bits (240), Expect = 2e-18
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = +2
Query: 209 CAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASNASTSNP 388
C V K+ FE+G ARQMPCKH+YH+DCIVPWL LH++CPVCRYQLP+ + SNA+ S
Sbjct: 186 CPVCKEDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYQLPSSAAAGSNAN-SRA 244
Query: 389 RNDQANN 409
R ANN
Sbjct: 245 RRGSANN 251
>gb|EAZ24742.1| hypothetical protein OsJ_08513 [Oryza sativa Japonica Group]
Length = 337
Score = 97.1 bits (240), Expect = 2e-18
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = +2
Query: 194 SEGVFCAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASNA 373
S+G C V K+ FE+G ARQMPCKH+YH+DCIVPWL LH++CPVCRYQL + + SNA
Sbjct: 194 SDGSQCPVCKEDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYQLLSSAAAGSNA 253
Query: 374 STSNPRNDQANNATSAATSQDSGQNND 454
+ S R ANN G++ +
Sbjct: 254 N-SRARRGSANNGGGGGGGGGDGRDRE 279
>dbj|BAJ87106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 137
Score = 96.7 bits (239), Expect = 3e-18
Identities = 38/79 (48%), Positives = 57/79 (72%)
Frame = +2
Query: 209 CAVYKDPFEVGNLARQMPCKHIYHNDCIVPWLELHSTCPVCRYQLPAGDDSASNASTSNP 388
C V KD FE+G+ AR+MPC H+YH+DCI+PWLE H++CPVCRY+LP S ++ S S
Sbjct: 36 CPVCKDKFELGSEAREMPCNHLYHSDCILPWLEQHNSCPVCRYELPTQSSSGASCSRSRS 95
Query: 389 RNDQANNATSAATSQDSGQ 445
N N+++S+++ + G+
Sbjct: 96 TNQNDNSSSSSSSGRTGGR 114